INFO [3453372] ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! INFO [3453372] Package versions INFO [3453372] ---------------- INFO [3453372] ESMValCore: 2.8.0 INFO [3453372] ESMValTool: 2.8.0 INFO [3453372] ---------------- INFO [3453372] Using config file /nird/home/yanchun/.esmvaltool/config-NS9560K.yml INFO [3453372] Writing program log files to: /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/main_log.txt /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/main_log_debug.txt INFO [3453372] Starting the Earth System Model Evaluation Tool at time: 2023-05-12 11:23:32 UTC INFO [3453372] ---------------------------------------------------------------------- INFO [3453372] RECIPE = /nird/home/yanchun/diagnostics/noresmvaltool/esmvaltool/tested_recipes/recipe_ocean_bgc.yml INFO [3453372] RUNDIR = /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run INFO [3453372] WORKDIR = /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/work INFO [3453372] PREPROCDIR = /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/preproc INFO [3453372] PLOTDIR = /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/plots INFO [3453372] ---------------------------------------------------------------------- INFO [3453372] Running tasks using at most 8 processes INFO [3453372] If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. INFO [3453372] If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. INFO [3453372] Corrected wrong 'ensemble' from 'r1i1p1' to 'r0i0p0' for Dataset: areacello, fx, CMIP5, HadGEM2-ES, historical, r0i0p0 INFO [3453372] Creating tasks from recipe INFO [3453372] Creating tasks for diagnostic diag_surface_maps_vs_WOA INFO [3453372] Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/thetao INFO [3453372] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'thetao' INFO [3453372] Found input files for Dataset: thetao, Omon, CMIP5, HadGEM2-ES, historical, r1i1p1, v20110916 INFO [3453372] Found input files for Dataset: thetao, Omon, OBS, WOA, 2013v2 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/thetao created. INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/so INFO [3453372] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'so' INFO [3453372] Found input files for Dataset: so, Omon, CMIP5, HadGEM2-ES, historical, r1i1p1, v20110916 INFO [3453372] Found input files for Dataset: so, Omon, OBS, WOA, 2013v2 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/so created. INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/no3 INFO [3453372] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'no3' INFO [3453372] Found input files for Dataset: no3, Oyr, CMIP5, HadGEM2-ES, historical, r1i1p1, v20110916 INFO [3453372] Found input files for Dataset: no3, Oyr, OBS, WOA, 2013v2 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/no3 created. INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/si INFO [3453372] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'si' INFO [3453372] Found input files for Dataset: si, Oyr, CMIP5, HadGEM2-ES, historical, r1i1p1, v20110916 INFO [3453372] Found input files for Dataset: si, Oyr, OBS, WOA, 2013v2 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/si created. INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/o2 INFO [3453372] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'o2' INFO [3453372] Found input files for Dataset: o2, Oyr, CMIP5, HadGEM2-ES, historical, r1i1p1, v20110916 INFO [3453372] Found input files for Dataset: o2, Oyr, OBS, WOA, 2013v2 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/o2 created. INFO [3453372] Creating preprocessor task diag_surface_maps_vs_WOA/areacello INFO [3453372] Creating preprocessor 'default' task for variable 'areacello' INFO [3453372] Corrected wrong 'ensemble' from 'r1i1p1' to 'r0i0p0' for Dataset: areacello, fx, CMIP5, HadGEM2-ES, historical, r0i0p0 INFO [3453372] Found input files for Dataset: areacello, fx, CMIP5, HadGEM2-ES, historical, r0i0p0, v20130612 INFO [3453372] PreprocessingTask diag_surface_maps_vs_WOA/areacello created. INFO [3453372] These tasks will be executed: diag_surface_maps_vs_WOA/so, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_surface_maps_vs_WOA/si, diag_surface_maps_vs_WOA/no3, diag_surface_maps_vs_WOA/areacello, diag_surface_maps_vs_WOA/o2, diag_surface_maps_vs_WOA/thetao INFO [3453372] Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/recipe_ocean_bgc_filled.yml INFO [3453372] Running 7 tasks using 7 processes INFO [3453511] Starting task diag_surface_maps_vs_WOA/thetao in process [3453511] INFO [3453512] Starting task diag_surface_maps_vs_WOA/so in process [3453512] INFO [3453513] Starting task diag_surface_maps_vs_WOA/no3 in process [3453513] INFO [3453514] Starting task diag_surface_maps_vs_WOA/si in process [3453514] INFO [3453515] Starting task diag_surface_maps_vs_WOA/o2 in process [3453515] INFO [3453516] Starting task diag_surface_maps_vs_WOA/areacello in process [3453516] INFO [3453372] Progress: 6 tasks running, 1 tasks waiting for ancestors, 0/7 done WARNING [3453512] There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc WARNING [3453512] There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc WARNING [3453512] There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file INFO [3453516] Successfully completed task diag_surface_maps_vs_WOA/areacello (priority 6) in 0:00:00.672144 INFO [3453372] Progress: 5 tasks running, 1 tasks waiting for ancestors, 1/7 done INFO [3453514] Successfully completed task diag_surface_maps_vs_WOA/si (priority 4) in 0:00:02.068952 INFO [3453513] Successfully completed task diag_surface_maps_vs_WOA/no3 (priority 3) in 0:00:02.129722 INFO [3453372] Progress: 4 tasks running, 1 tasks waiting for ancestors, 2/7 done INFO [3453515] Successfully completed task diag_surface_maps_vs_WOA/o2 (priority 5) in 0:00:02.270576 INFO [3453372] Progress: 3 tasks running, 1 tasks waiting for ancestors, 3/7 done INFO [3453372] Progress: 2 tasks running, 1 tasks waiting for ancestors, 4/7 done INFO [3453511] Successfully completed task diag_surface_maps_vs_WOA/thetao (priority 1) in 0:00:19.785610 INFO [3453372] Progress: 1 tasks running, 1 tasks waiting for ancestors, 5/7 done INFO [3453512] Successfully completed task diag_surface_maps_vs_WOA/so (priority 2) in 0:00:24.159940 INFO [3453372] Progress: 0 tasks running, 1 tasks waiting for ancestors, 6/7 done INFO [3453517] Starting task diag_surface_maps_vs_WOA/Global_Ocean_surface_map in process [3453517] INFO [3453517] Running command ['/conda/esmvaltool/2.8.0/bin/python', '/conda/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml'] INFO [3453517] Writing output to /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [3453517] Writing plots to /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [3453517] Writing log to /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/log.txt INFO [3453517] To re-run this diagnostic script, run: cd /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map; MPLBACKEND="Agg" /conda/esmvaltool/2.8.0/bin/python /conda/esmvaltool/2.8.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml INFO [3453372] Progress: 1 tasks running, 0 tasks waiting for ancestors, 6/7 done INFO [3453517] Maximum memory used (estimate): 0.7 GB INFO [3453517] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [3453517] Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_surface_map (priority 0) in 0:00:26.757951 INFO [3453372] Progress: 0 tasks running, 0 tasks waiting for ancestors, 7/7 done INFO [3453372] Successfully completed all tasks. INFO [3453372] Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/run/recipe_ocean_bgc_filled.yml INFO [3453372] Wrote recipe output to: file:///projects/NS2980K/www/yanchun/esmvaltool2.8.0/recipe_ocean_bgc_20230512_112331/index.html INFO [3453372] Ending the Earth System Model Evaluation Tool at time: 2023-05-12 11:24:23 UTC INFO [3453372] Time for running the recipe was: 0:00:51.476112 INFO [3453372] Maximum memory used (estimate): 9.9 GB INFO [3453372] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [3453372] Run was successful