INFO [684385] ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! INFO [684385] Package versions INFO [684385] ---------------- INFO [684385] ESMValCore: 2.8.0 INFO [684385] ESMValTool: 2.8.0 INFO [684385] ---------------- INFO [684385] Using config file /nird/home/tomast/.esmvaltool/config-user.yml INFO [684385] Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/run/main_log_debug.txt INFO [684385] Using default ESGF configuration, configuration file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml not present. WARNING [684385] ESGF credentials missing, only data that is accessible without logging in will be available. See https://esgf.github.io/esgf-user-support/user_guide.html for instructions on how to create an account if you do not have one yet. Next, configure your system so esmvaltool can use your credentials. This can be done using the keyring package, or you can just enter them in /nird/home/tomast/.esmvaltool/esgf-pyclient.yml. keyring ======= First install the keyring package (requires a supported backend, see https://pypi.org/project/keyring/): $ pip install keyring Next, set your username and password by running the commands: $ keyring set ESGF hostname $ keyring set ESGF username $ keyring set ESGF password To check that you entered your credentials correctly, run: $ keyring get ESGF hostname $ keyring get ESGF username $ keyring get ESGF password configuration file ================== You can store the hostname, username, and password or your OpenID account in a plain text in the file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml like this: logon: hostname: "your-hostname" username: "your-username" password: "your-password" or your can configure an interactive log in: logon: interactive: true Note that storing your password in plain text in the configuration file is less secure. On shared systems, make sure the permissions of the file are set so only you can read it, i.e. $ ls -l /nird/home/tomast/.esmvaltool/esgf-pyclient.yml shows permissions -rw-------. INFO [684385] Starting the Earth System Model Evaluation Tool at time: 2023-06-04 13:55:38 UTC INFO [684385] ---------------------------------------------------------------------- INFO [684385] RECIPE = /projects/NS2980K/home/tomast/ESMValTool/recipes-2.8.0/recipe_cox18nature.yml INFO [684385] RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/run INFO [684385] WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/work INFO [684385] PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/preproc INFO [684385] PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.8.0/recipe_cox18nature_20230604_135537/plots INFO [684385] ---------------------------------------------------------------------- INFO [684385] Running tasks using at most 255 processes INFO [684385] If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. INFO [684385] If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. WARNING [684385] 'CMIP5' rootpaths '/scratch/tomast/ESGF/cmip5/output1' set in config-user.yml do not exist INFO [684385] For Dataset: tasa, Amon, OBS, HadCRUT4, ['historical', 'rcp85'], r1i1p1, 1, supplementaries: areacella, *, *: ignoring supplementary variable 'areacella', unable to expand wildcards 'mip', 'version'. INFO [684385] Creating tasks from recipe INFO [684385] Creating tasks for diagnostic diag_ecs INFO [684385] Creating diagnostic task diag_ecs/ecs INFO [684385] Creating tasks for diagnostic diag_psi INFO [684385] Creating diagnostic task diag_psi/psi INFO [684385] Creating preprocessor task diag_psi/tas INFO [684385] Creating preprocessor 'spatial_mean' task for variable 'tas' INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, ACCESS1-0, ['historical', 'rcp85'], r1i1p1, v20120727, supplementaries: areacella, fx, historical, r0i0p0, v20120115 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, BNU-ESM, ['historical', 'rcp85'], r1i1p1, v20120510, supplementaries: areacella, fx, piControl, r0i0p0, v20130507 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, CanESM2, ['historical', 'rcp85'], r1i1p1, v20120718, supplementaries: areacella, fx, historical, r0i0p0, v20120410 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, CCSM4, ['historical', 'rcp85'], r1i1p1, v20160829, supplementaries: areacella, fx, historical, r0i0p0, v20130312 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, CNRM-CM5, ['historical', 'rcp85'], r1i1p1, ['v20110901', 'v20110930'], supplementaries: areacella, fx, historical, r0i0p0, v20130826 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, CSIRO-Mk3-6-0, ['historical', 'rcp85'], r1i1p1, v20120323, supplementaries: areacella, fx, historical, r0i0p0, v20110518 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, GFDL-ESM2M, ['historical', 'rcp85'], r1i1p1, v20111228, supplementaries: areacella, fx, historical, r0i0p0, v20120123 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, HadGEM2-ES, ['historical', 'rcp85'], r1i1p1, ['v20120928', 'v20130430'], supplementaries: areacella, fx, historical, r0i0p0, v20120215 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, GISS-E2-R, ['historical', 'rcp85'], r1i1p1, ['v20160502', 'v20160513'], supplementaries: areacella, fx, piControl, r0i0p0, v20160511 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, inmcm4, ['historical', 'rcp85'], r1i1p1, v20130207, supplementaries: areacella, fx, rcp85, r0i0p0, v20110323 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, IPSL-CM5B-LR, ['historical', 'rcp85'], r1i1p1, ['v20120114', 'v20120430'], supplementaries: areacella, fx, historical, r0i0p0, v20120430 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, MIROC-ESM, ['historical', 'rcp85'], r1i1p1, v20120710, supplementaries: areacella, fx, historical, r0i0p0, v20120828 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, MPI-ESM-LR, ['historical', 'rcp85'], r1i1p1, v20120315, supplementaries: areacella, fx, amipFuture, r0i0p0, v20120917 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, MRI-CGCM3, ['historical', 'rcp85'], r1i1p1, v20120701, supplementaries: areacella, fx, historical, r0i0p0, v20110831 INFO [684385] Found input files for Dataset: tas, Amon, CMIP5, NorESM1-M, ['historical', 'rcp85'], r1i1p1, v20120412, supplementaries: areacella, fx, historical, r0i0p0, v20110901 INFO [684385] PreprocessingTask diag_psi/tas created. INFO [684385] Creating preprocessor task diag_psi/tasa INFO [684385] Creating preprocessor 'spatial_mean' task for variable 'tasa' WARNING [684385] Preprocessor function area_statistics works best when at least one supplementary variable of ['areacella', 'areacello'] is defined in the recipe for Dataset: {'diagnostic': 'diag_psi', 'variable_group': 'tasa', 'dataset': 'HadCRUT4', 'project': 'OBS', 'mip': 'Amon', 'short_name': 'tasa', 'alias': 'OBS', 'ensemble': 'r1i1p1', 'exp': ['historical', 'rcp85'], 'frequency': 'mon', 'long_name': 'Near-Surface Air Temperature Anomaly', 'modeling_realm': ['atmos'], 'original_short_name': 'tasa', 'preprocessor': 'spatial_mean', 'recipe_dataset_index': 0, 'standard_name': '', 'tier': 2, 'timerange': '1880/2015', 'type': 'ground', 'units': 'K', 'version': 1} session: 'recipe_cox18nature_20230604_135537'. ERROR [684385] No input files found for Dataset: {'diagnostic': 'diag_psi', 'variable_group': 'tasa', 'dataset': 'HadCRUT4', 'project': 'OBS', 'mip': 'Amon', 'short_name': 'tasa', 'alias': 'OBS', 'ensemble': 'r1i1p1', 'exp': ['historical', 'rcp85'], 'frequency': 'mon', 'long_name': 'Near-Surface Air Temperature Anomaly', 'modeling_realm': ['atmos'], 'original_short_name': 'tasa', 'preprocessor': 'spatial_mean', 'recipe_dataset_index': 0, 'standard_name': '', 'tier': 2, 'timerange': '1880/2015', 'type': 'ground', 'units': 'K', 'version': 1} session: 'recipe_cox18nature_20230604_135537' ERROR [684385] Looked for files matching /projects/NS2980K/data/obsdata/cmor/Tier2/HadCRUT4/OBS_HadCRUT4_ground_1_Amon_tasa[_.]*nc /projects/NS9560K-datalake/ESGF/obsdata/Tier2/HadCRUT4/OBS_HadCRUT4_ground_1_Amon_tasa[_.]*nc /scratch/tomast/ESGF/obsdata/Tier2/HadCRUT4/OBS_HadCRUT4_ground_1_Amon_tasa[_.]*nc ERROR [684385] Set 'log_level' to 'debug' to get more information INFO [684385] Creating tasks for diagnostic diag_cox18nature INFO [684385] Creating diagnostic task diag_cox18nature/cox18nature ERROR [684385] Could not create all tasks ERROR [684385] Missing data for preprocessor diag_psi/tasa: - Missing data for Dataset: tasa, Amon, OBS, HadCRUT4, ['historical', 'rcp85'], r1i1p1, 1 INFO [684385] Maximum memory used (estimate): 0.5 GB INFO [684385] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. ERROR [684385] Could not create all tasks