2023-03-06 17:10:19,553 UTC [220691] INFO esmvalcore._main:473 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2023-03-06 17:10:19,553 UTC [220691] INFO esmvalcore._main:474 Package versions 2023-03-06 17:10:19,553 UTC [220691] INFO esmvalcore._main:475 ---------------- 2023-03-06 17:10:19,553 UTC [220691] INFO esmvalcore._main:476 ESMValCore: 2.7.0 2023-03-06 17:10:19,554 UTC [220691] INFO esmvalcore._main:478 ESMValTool: 2.7.0 2023-03-06 17:10:19,554 UTC [220691] INFO esmvalcore._main:479 ---------------- 2023-03-06 17:10:19,554 UTC [220691] INFO esmvalcore._main:480 Using config file /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/config-ipcc_node-270.yml 2023-03-06 17:10:19,554 UTC [220691] INFO esmvalcore._main:481 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/run/main_log_debug.txt 2023-03-06 17:10:19,555 UTC [220691] INFO esmvalcore._main:86 Starting the Earth System Model Evaluation Tool at time: 2023-03-06 17:10:19 UTC 2023-03-06 17:10:19,555 UTC [220691] INFO esmvalcore._main:90 ---------------------------------------------------------------------- 2023-03-06 17:10:19,555 UTC [220691] INFO esmvalcore._main:91 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/recipe_ocean_bgc_NorESM2.yml 2023-03-06 17:10:19,556 UTC [220691] INFO esmvalcore._main:92 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/run 2023-03-06 17:10:19,556 UTC [220691] INFO esmvalcore._main:93 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/work 2023-03-06 17:10:19,556 UTC [220691] INFO esmvalcore._main:94 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc 2023-03-06 17:10:19,556 UTC [220691] INFO esmvalcore._main:95 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/plots 2023-03-06 17:10:19,556 UTC [220691] INFO esmvalcore._main:96 ---------------------------------------------------------------------- 2023-03-06 17:10:19,557 UTC [220691] INFO esmvalcore._main:100 Running tasks using at most 8 processes 2023-03-06 17:10:19,557 UTC [220691] INFO esmvalcore._main:102 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2023-03-06 17:10:19,557 UTC [220691] INFO esmvalcore._main:105 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2023-03-06 17:10:19,588 UTC [220691] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvalcore/recipe_schema.yml 2023-03-06 17:10:19,642 UTC [220691] DEBUG esmvalcore._recipe:1342 Retrieving diagnostics from recipe 2023-03-06 17:10:19,642 UTC [220691] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_transect_vs_WOA 2023-03-06 17:10:19,644 UTC [220691] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_transect_vs_WOA 2023-03-06 17:10:19,645 UTC [220691] INFO esmvalcore._recipe:1845 Creating tasks from recipe 2023-03-06 17:10:19,645 UTC [220691] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_transect_vs_WOA 2023-03-06 17:10:19,645 UTC [220691] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_transect_vs_WOA/Transects_vs_WOA 2023-03-06 17:10:19,645 UTC [220691] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/thetao 2023-03-06 17:10:19,645 UTC [220691] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'thetao' 2023-03-06 17:10:19,729 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc'] in ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/'] 2023-03-06 17:10:19,795 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP6: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:19,797 UTC [220691] INFO esmvalcore._recipe:633 Found input files for CMIP6 2023-03-06 17:10:19,849 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS6_WOA_clim_2018_Omon_thetao[_.]*nc'] in ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-03-06 17:10:19,855 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS6: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:19,855 UTC [220691] INFO esmvalcore._recipe:633 Found input files for OBS6 2023-03-06 17:10:19,881 UTC [220691] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/thetao created. 2023-03-06 17:10:19,882 UTC [220691] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc 2023-03-06 17:10:19,882 UTC [220691] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/so 2023-03-06 17:10:19,882 UTC [220691] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'so' 2023-03-06 17:10:19,930 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc'] in ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/'] 2023-03-06 17:10:19,948 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP6: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:19,948 UTC [220691] INFO esmvalcore._recipe:633 Found input files for CMIP6 2023-03-06 17:10:19,961 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS6_WOA_clim_2018_Omon_so[_.]*nc'] in ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-03-06 17:10:19,964 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS6: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:19,964 UTC [220691] INFO esmvalcore._recipe:633 Found input files for OBS6 2023-03-06 17:10:19,986 UTC [220691] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/so created. 2023-03-06 17:10:19,986 UTC [220691] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc 2023-03-06 17:10:19,987 UTC [220691] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/no3 2023-03-06 17:10:19,987 UTC [220691] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'no3' 2023-03-06 17:10:19,988 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc'] in ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/'] 2023-03-06 17:10:19,990 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP6: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:19,990 UTC [220691] INFO esmvalcore._recipe:633 Found input files for CMIP6 2023-03-06 17:10:20,000 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS6_WOA_clim_2018_Omon_no3[_.]*nc'] in ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-03-06 17:10:20,002 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS6: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_no3_200001-200012.nc 2023-03-06 17:10:20,002 UTC [220691] INFO esmvalcore._recipe:633 Found input files for OBS6 2023-03-06 17:10:20,017 UTC [220691] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/no3 created. 2023-03-06 17:10:20,018 UTC [220691] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc 2023-03-06 17:10:20,018 UTC [220691] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/si 2023-03-06 17:10:20,018 UTC [220691] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'si' 2023-03-06 17:10:20,019 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc'] in ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/'] 2023-03-06 17:10:20,020 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP6: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,020 UTC [220691] INFO esmvalcore._recipe:633 Found input files for CMIP6 2023-03-06 17:10:20,027 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS6_WOA_clim_2018_Omon_si[_.]*nc'] in ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-03-06 17:10:20,029 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS6: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,029 UTC [220691] INFO esmvalcore._recipe:633 Found input files for OBS6 2023-03-06 17:10:20,043 UTC [220691] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/si created. 2023-03-06 17:10:20,043 UTC [220691] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc 2023-03-06 17:10:20,043 UTC [220691] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/o2 2023-03-06 17:10:20,043 UTC [220691] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'o2' 2023-03-06 17:10:20,044 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc'] in ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/'] 2023-03-06 17:10:20,045 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP6: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,045 UTC [220691] INFO esmvalcore._recipe:633 Found input files for CMIP6 2023-03-06 17:10:20,052 UTC [220691] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS6_WOA_clim_2018_Omon_o2[_.]*nc'] in ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-03-06 17:10:20,053 UTC [220691] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS6: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc 2023-03-06 17:10:20,054 UTC [220691] INFO esmvalcore._recipe:633 Found input files for OBS6 2023-03-06 17:10:20,067 UTC [220691] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/o2 created. 2023-03-06 17:10:20,067 UTC [220691] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc 2023-03-06 17:10:20,067 UTC [220691] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_transect_vs_WOA script Transects_vs_WOA 2023-03-06 17:10:20,067 UTC [220691] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/thetao matches ['diag_transect_vs_WOA/thetao'] 2023-03-06 17:10:20,068 UTC [220691] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/so matches ['diag_transect_vs_WOA/so'] 2023-03-06 17:10:20,068 UTC [220691] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/no3 matches ['diag_transect_vs_WOA/no3'] 2023-03-06 17:10:20,068 UTC [220691] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/si matches ['diag_transect_vs_WOA/si'] 2023-03-06 17:10:20,068 UTC [220691] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/o2 matches ['diag_transect_vs_WOA/o2'] 2023-03-06 17:10:20,068 UTC [220691] INFO esmvalcore._recipe:1894 These tasks will be executed: diag_transect_vs_WOA/Transects_vs_WOA, diag_transect_vs_WOA/thetao, diag_transect_vs_WOA/no3, diag_transect_vs_WOA/si, diag_transect_vs_WOA/o2, diag_transect_vs_WOA/so 2023-03-06 17:10:20,071 UTC [220691] DEBUG esmvalcore._main:122 Recipe summary: DiagnosticTask: diag_transect_vs_WOA/Transects_vs_WOA script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/plots/diag_transect_vs_WOA/Transects_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc_NorESM2.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/run/diag_transect_vs_WOA/Transects_vs_WOA', 'script': 'Transects_vs_WOA', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/work/diag_transect_vs_WOA/Transects_vs_WOA'} ancestors: PreprocessingTask: diag_transect_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'degC', 'variable_group': 'thetao', 'version': 2018}, 'fix_file': {'alias': 'OBS6', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'degC', 'variable_group': 'thetao', 'version': 2018}, 'fix_metadata': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'degC', 'variable_group': 'thetao', 'version': 2018}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'degC', 'variable_group': 'thetao'}, 'fix_file': {'activity': 'CMIP', 'alias': 'CMIP6', 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'degC', 'variable_group': 'thetao'}, 'fix_metadata': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'degC', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': '0.001', 'variable_group': 'so'}, 'fix_file': {'activity': 'CMIP', 'alias': 'CMIP6', 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': '0.001', 'variable_group': 'so'}, 'fix_metadata': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': '0.001', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': '0.001', 'variable_group': 'so', 'version': 2018}, 'fix_file': {'alias': 'OBS6', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': '0.001', 'variable_group': 'so', 'version': 2018}, 'fix_metadata': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': '0.001', 'variable_group': 'so', 'version': 2018}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'activity': 'CMIP', 'alias': 'CMIP6', 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': 2018}, 'fix_file': {'alias': 'OBS6', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': 2018}, 'fix_metadata': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': 2018}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/OBS6_WOA_clim_2018_Omon_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Total Dissolved Inorganic Silicon Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'activity': 'CMIP', 'alias': 'CMIP6', 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Total Dissolved Inorganic Silicon Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Total Dissolved Inorganic Silicon ' 'Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Total Dissolved Inorganic Silicon Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': 2018}, 'fix_file': {'alias': 'OBS6', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Total Dissolved Inorganic Silicon Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': 2018}, 'fix_metadata': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Total Dissolved Inorganic Silicon ' 'Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': 2018}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'activity': 'CMIP', 'alias': 'CMIP6', 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'activity': 'CMIP', 'alias': 'CMIP6', 'check_level': , 'dataset': 'NorESM2-MM', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1f1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', 'frequency': 'mon', 'grid': 'gr', 'institute': ['NCC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'CMIP6', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS6', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': 2018}, 'fix_file': {'alias': 'OBS6', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': 2018}, 'fix_metadata': {'alias': 'OBS6', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc', 'frequency': 'mon', 'grid': 'gr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS6', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': 2018}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/OBS6_WOA_clim_2018_Omon_o2_2000-2000.nc'}} ancestors: None 2023-03-06 17:10:20,088 UTC [220691] INFO esmvalcore._task:747 Running 6 tasks using 6 processes 2023-03-06 17:10:20,140 UTC [220843] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/thetao in process [220843] 2023-03-06 17:10:20,140 UTC [220844] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/so in process [220844] 2023-03-06 17:10:20,142 UTC [220845] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/no3 in process [220845] 2023-03-06 17:10:20,142 UTC [220847] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/o2 in process [220847] 2023-03-06 17:10:20,142 UTC [220846] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/si in process [220846] 2023-03-06 17:10:20,154 UTC [220844] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-03-06 17:10:20,156 UTC [220847] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-03-06 17:10:20,154 UTC [220844] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc 2023-03-06 17:10:20,158 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:20,158 UTC [220843] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-03-06 17:10:20,159 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed' 2023-03-06 17:10:20,159 UTC [220845] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-03-06 17:10:20,160 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed' 2023-03-06 17:10:20,160 UTC [220846] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-03-06 17:10:20,160 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed' 2023-03-06 17:10:20,161 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:20,157 UTC [220847] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc 2023-03-06 17:10:20,161 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,161 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:20,161 UTC [220844] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,162 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004_fixed' 2023-03-06 17:10:20,159 UTC [220845] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc 2023-03-06 17:10:20,164 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:20,159 UTC [220843] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc 2023-03-06 17:10:20,164 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:20,165 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004_fixed' 2023-03-06 17:10:20,165 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed' 2023-03-06 17:10:20,160 UTC [220846] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc 2023-03-06 17:10:20,165 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:20,166 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:20,166 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) callback = 2023-03-06 17:10:20,166 UTC [220847] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,167 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed' 2023-03-06 17:10:20,167 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed' 2023-03-06 17:10:20,167 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed' 2023-03-06 17:10:20,168 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:20,168 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,168 UTC [220843] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,168 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed' 2023-03-06 17:10:20,169 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:20,169 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed' 2023-03-06 17:10:20,169 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) callback = 2023-03-06 17:10:20,169 UTC [220845] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,169 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:20,170 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,170 UTC [220846] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,233 UTC [220691] INFO esmvalcore._task:779 Progress: 5 tasks running, 1 tasks waiting for ancestors, 0/6 done 2023-03-06 17:10:20,238 UTC [220843] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,238 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,238 UTC [220843] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,250 UTC [220846] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,250 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,250 UTC [220846] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,251 UTC [220847] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,252 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:20,255 UTC [220843] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,255 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,255 UTC [220843] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,256 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', check_level = 2023-03-06 17:10:20,258 UTC [220845] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,258 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:20,261 UTC [220844] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,261 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,261 UTC [220844] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,263 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', check_level = 2023-03-06 17:10:20,268 UTC [220846] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,268 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,268 UTC [220846] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,268 UTC [220843] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,269 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:20,274 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', check_level = 2023-03-06 17:10:20,276 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,276 UTC [220843] WARNING esmvalcore.cmor.check:261 There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,278 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,278 UTC [220843] WARNING esmvalcore.cmor.check:261 There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,279 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,279 UTC [220843] WARNING esmvalcore.cmor.check:261 There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc 2023-03-06 17:10:20,279 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:20,283 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,283 UTC [220846] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,283 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:20,284 UTC [220844] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,285 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-03-06 17:10:20,285 UTC [220844] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,287 UTC [220843] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,289 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', check_level = 2023-03-06 17:10:20,292 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,292 UTC [220846] WARNING esmvalcore.cmor.check:261 There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,293 UTC [220847] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable o2: Multidimensional longitude coordinate is not set in CMOR standard. ESMValTool will change the original value of longitude to lon to match the one-dimensional case. Multidimensional latitude coordinate is not set in CMOR standard. ESMValTool will change the original value of latitude to lat to match the one-dimensional case. Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,293 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:20,294 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,292 UTC [220843] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,294 UTC [220846] WARNING esmvalcore.cmor.check:261 There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,295 UTC [220845] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable no3: Multidimensional longitude coordinate is not set in CMOR standard. ESMValTool will change the original value of longitude to lon to match the one-dimensional case. Multidimensional latitude coordinate is not set in CMOR standard. ESMValTool will change the original value of latitude to lat to match the one-dimensional case. Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:20,295 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:20,294 UTC [220843] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,296 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,296 UTC [220846] WARNING esmvalcore.cmor.check:261 There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc 2023-03-06 17:10:20,296 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:20,297 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) 2023-03-06 17:10:20,297 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:20,298 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) 2023-03-06 17:10:20,298 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:20,296 UTC [220843] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,299 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'no3', frequency = 'mon', check_level = 2023-03-06 17:10:20,300 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,300 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'o2', frequency = 'mon', check_level = 2023-03-06 17:10:20,301 UTC [220845] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable no3: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:20,301 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:20,302 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) timerange = '2001/2004' 2023-03-06 17:10:20,301 UTC [220843] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,303 UTC [220843] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (degC) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,304 UTC [220844] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,304 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:20,304 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:20,304 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-03-06 17:10:20,306 UTC [220847] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable o2: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:20,306 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:20,306 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:20,306 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:20,306 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-03-06 17:10:20,305 UTC [220846] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,308 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) timerange = '2001/2004' 2023-03-06 17:10:20,309 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:20,310 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:20,310 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/no3/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_no3_gr_2001-2004.nc', check_level = 2023-03-06 17:10:20,311 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc', check_level = 2023-03-06 17:10:20,311 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:20,311 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:20,311 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', check_level = 2023-03-06 17:10:20,312 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-03-06 17:10:20,312 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:20,312 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'no3', frequency = 'mon', check_level = 2023-03-06 17:10:20,312 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:20,312 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:20,312 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:20,311 UTC [220846] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,313 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:20,313 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:20,313 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:20,314 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:20,314 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,313 UTC [220846] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,314 UTC [220844] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,317 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,317 UTC [220844] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,315 UTC [220846] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,319 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,319 UTC [220844] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc 2023-03-06 17:10:20,319 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:20,319 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:20,322 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/o2/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_o2_gr_2001-2004.nc', check_level = 2023-03-06 17:10:20,322 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:20,321 UTC [220846] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,324 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,323 UTC [220846] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_inorganic_silicon_in_sea_water / (mol m-3) (time: 12; depth: 43; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,324 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:20,324 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'o2', frequency = 'mon', check_level = 2023-03-06 17:10:20,325 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:20,325 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'si', frequency = 'mon', check_level = 2023-03-06 17:10:20,326 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:20,326 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:20,327 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:20,327 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:20,327 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-03-06 17:10:20,329 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:20,331 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:20,331 UTC [220843] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:20,331 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:20,332 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc', check_level = 2023-03-06 17:10:20,332 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:20,333 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'si', frequency = 'mon', check_level = 2023-03-06 17:10:20,333 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:20,333 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:20,330 UTC [220844] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,334 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:20,334 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:20,335 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:20,339 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:20,337 UTC [220844] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,340 UTC [220845] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:20,341 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:20,341 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:20,340 UTC [220844] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,343 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:20,345 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-03-06 17:10:20,343 UTC [220844] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' and sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' in this order 2023-03-06 17:10:20,346 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-03-06 17:10:20,348 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-03-06 17:10:20,350 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,350 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-03-06 17:10:20,349 UTC [220844] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' ends before sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' 2023-03-06 17:10:20,352 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc' 2023-03-06 17:10:20,352 UTC [220844] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 12; depth: 57; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean within years time mean over years time Attributes: Conventions 'CF-1.7' host 'login2' mip 'Omon' modeling_realm 'clim' project_id 'OBS6' reference 'doi not found' source 'https://www.ncei.noaa.gov/data/oceans/woa/WOA18/DATA/' tier '2' title 'WOA data reformatted for ESMValTool v2.1.1' user 'tl28319' version '2018' contains all needed data so using it fully 2023-03-06 17:10:20,353 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:20,353 UTC [220846] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:20,354 UTC [220845] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:20,354 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:20,354 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-03-06 17:10:20,355 UTC [220845] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/no3/gr/latest/no3_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:20,356 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:20,356 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:20,356 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:20,357 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-03-06 17:10:20,361 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:20,362 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS6', type = 'clim', version = 2018, tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc', check_level = 2023-03-06 17:10:20,362 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:20,363 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:20,364 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS6', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-03-06 17:10:20,364 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:20,364 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:20,365 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:20,365 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:20,366 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:20,368 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-03-06 17:10:20,368 UTC [220847] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:20,369 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:20,370 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-03-06 17:10:20,372 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:20,372 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-03-06 17:10:20,373 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,373 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-03-06 17:10:20,376 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc' 2023-03-06 17:10:20,387 UTC [220847] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:20,387 UTC [220844] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:20,388 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:20,389 UTC [220847] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/o2/gr/latest/o2_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:20,390 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:20,397 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:20,399 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:20,399 UTC [220843] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc 2023-03-06 17:10:20,404 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-03-06 17:10:20,406 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-03-06 17:10:20,408 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-03-06 17:10:20,410 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) 2023-03-06 17:10:20,410 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-03-06 17:10:20,411 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc' 2023-03-06 17:10:20,414 UTC [220846] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc 2023-03-06 17:10:20,430 UTC [220844] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc 2023-03-06 17:10:21,523 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-03-06 17:10:21,523 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/OBS6_WOA_clim_2018_Omon_thetao_2000-2000_fixed'] 2023-03-06 17:10:21,717 UTC [220843] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc 2023-03-06 17:10:21,717 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:21,717 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004_fixed' 2023-03-06 17:10:21,718 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:21,719 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) callback = 2023-03-06 17:10:21,719 UTC [220843] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:21,741 UTC [220843] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:21,741 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:21,743 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', check_level = 2023-03-06 17:10:21,783 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Multidimensional longitude coordinate is not set in CMOR standard. ESMValTool will change the original value of longitude to lon to match the one-dimensional case. Multidimensional latitude coordinate is not set in CMOR standard. ESMValTool will change the original value of latitude to lat to match the one-dimensional case. Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:21,784 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:21,785 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) 2023-03-06 17:10:21,785 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:21,786 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-03-06 17:10:21,789 UTC [220843] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable thetao: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:21,789 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:21,790 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) timerange = '2001/2004' 2023-03-06 17:10:21,795 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:21,797 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'degC', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/thetao/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_thetao_gr_2001-2004.nc', check_level = 2023-03-06 17:10:21,797 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:21,798 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-03-06 17:10:21,798 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:21,799 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:21,799 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:21,800 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:21,817 UTC [220843] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:21,818 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:21,819 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:21,830 UTC [220843] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:21,831 UTC [220843] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/thetao/gr/latest/thetao_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:23,445 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-03-06 17:10:23,446 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/OBS6_WOA_clim_2018_Omon_so_2000-2000_fixed'] 2023-03-06 17:10:23,578 UTC [220844] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc 2023-03-06 17:10:23,578 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:23,579 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004_fixed' 2023-03-06 17:10:23,580 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:23,580 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) callback = 2023-03-06 17:10:23,580 UTC [220844] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:23,609 UTC [220844] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:23,609 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:23,612 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', check_level = 2023-03-06 17:10:23,661 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Multidimensional longitude coordinate is not set in CMOR standard. ESMValTool will change the original value of longitude to lon to match the one-dimensional case. Multidimensional latitude coordinate is not set in CMOR standard. ESMValTool will change the original value of latitude to lat to match the one-dimensional case. Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:23,662 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:23,664 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) 2023-03-06 17:10:23,664 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:23,665 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-03-06 17:10:23,668 UTC [220844] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable so: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:23,668 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:23,669 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) timerange = '2001/2004' 2023-03-06 17:10:23,675 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:23,677 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = '0.001', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/so/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_so_gr_2001-2004.nc', check_level = 2023-03-06 17:10:23,677 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:23,678 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-03-06 17:10:23,678 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:23,679 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:23,680 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:23,681 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:23,696 UTC [220844] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:23,697 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:23,698 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:23,709 UTC [220844] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:23,710 UTC [220844] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/so/gr/latest/so_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:23,997 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-03-06 17:10:23,997 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/OBS6_WOA_clim_2018_Omon_si_2000-2000_fixed'] 2023-03-06 17:10:24,187 UTC [220846] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc 2023-03-06 17:10:24,188 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-03-06 17:10:24,188 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004_fixed' 2023-03-06 17:10:24,190 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-03-06 17:10:24,191 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc' with function argument(s) callback = 2023-03-06 17:10:24,191 UTC [220846] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:24,228 UTC [220846] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:24,228 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-03-06 17:10:24,232 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', check_level = 2023-03-06 17:10:24,259 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Multidimensional longitude coordinate is not set in CMOR standard. ESMValTool will change the original value of longitude to lon to match the one-dimensional case. Multidimensional latitude coordinate is not set in CMOR standard. ESMValTool will change the original value of latitude to lat to match the one-dimensional case. Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2023-03-06 17:10:24,259 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-03-06 17:10:24,262 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) 2023-03-06 17:10:24,262 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-03-06 17:10:24,264 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'si', frequency = 'mon', check_level = 2023-03-06 17:10:24,267 UTC [220846] DEBUG esmvalcore.cmor.check:279 There were metadata changes in variable si: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2023-03-06 17:10:24,267 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-03-06 17:10:24,269 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) timerange = '2001/2004' 2023-03-06 17:10:24,276 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-03-06 17:10:24,278 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', grid = 'gr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', recipe_dataset_index = 0, timerange = '2001/2004', institute = ['NCC'], activity = 'CMIP', alias = 'CMIP6', original_short_name = 'si', standard_name = 'mole_concentration_of_dissolved_inorganic_silicon_in_sea_water', long_name = 'Total Dissolved Inorganic Silicon Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230306_171017/preproc/diag_transect_vs_WOA/si/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_si_gr_2001-2004.nc', check_level = 2023-03-06 17:10:24,278 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-03-06 17:10:24,280 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) cmor_table = 'CMIP6', mip = 'Omon', short_name = 'si', frequency = 'mon', check_level = 2023-03-06 17:10:24,280 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-03-06 17:10:24,281 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) fx_variables = {}, check_level = 2023-03-06 17:10:24,282 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-03-06 17:10:24,283 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) operator = 'mean' 2023-03-06 17:10:24,304 UTC [220846] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-03-06 17:10:24,305 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-03-06 17:10:24,307 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-03-06 17:10:24,320 UTC [220846] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-03-06 17:10:24,322 UTC [220846] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/si/gr/latest/si_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-03-06 17:10:43,772 UTC [220691] INFO esmvalcore._task:127 Maximum memory used (estimate): 43.3 GB 2023-03-06 17:10:43,773 UTC [220691] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur.