INFO [193875] ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! INFO [193875] Package versions INFO [193875] ---------------- INFO [193875] ESMValCore: 2.7.0 INFO [193875] ESMValTool: 2.7.0 INFO [193875] ---------------- INFO [193875] Using config file /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/config-ipcc_node-270.yml INFO [193875] Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/main_log_debug.txt INFO [193875] Starting the Earth System Model Evaluation Tool at time: 2023-03-03 12:57:08 UTC INFO [193875] ---------------------------------------------------------------------- INFO [193875] RECIPE = /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/recipe_ocean_bgc_NorESM2.yml INFO [193875] RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run INFO [193875] WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/work INFO [193875] PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/preproc INFO [193875] PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/plots INFO [193875] ---------------------------------------------------------------------- INFO [193875] Running tasks using at most 8 processes INFO [193875] If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. INFO [193875] If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. INFO [193875] Creating tasks from recipe INFO [193875] Creating tasks for diagnostic diag_surface_maps_vs_WOA INFO [193875] Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [193875] Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs INFO [193875] Creating preprocessor task diag_surface_maps_vs_WOA/thetao INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D_SH' task for variable 'thetao' INFO [193875] Found input files for CMIP6 INFO [193875] Found input files for OBS6 INFO [193875] PreprocessingTask diag_surface_maps_vs_WOA/thetao created. INFO [193875] Creating preprocessor task diag_surface_maps_vs_WOA/so INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D_SH' task for variable 'so' INFO [193875] Found input files for CMIP6 INFO [193875] Found input files for OBS6 INFO [193875] PreprocessingTask diag_surface_maps_vs_WOA/so created. INFO [193875] Creating preprocessor task diag_surface_maps_vs_WOA/si INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D_SH' task for variable 'si' INFO [193875] Found input files for CMIP6 INFO [193875] Found input files for OBS6 INFO [193875] PreprocessingTask diag_surface_maps_vs_WOA/si created. INFO [193875] Creating preprocessor task diag_surface_maps_vs_WOA/o2 INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D_SH' task for variable 'o2' INFO [193875] Found input files for CMIP6 INFO [193875] Found input files for OBS6 INFO [193875] PreprocessingTask diag_surface_maps_vs_WOA/o2 created. INFO [193875] Creating preprocessor task diag_surface_maps_vs_WOA/po4 INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D_SH' task for variable 'po4' INFO [193875] Found input files for CMIP6 INFO [193875] Found input files for OBS6 INFO [193875] PreprocessingTask diag_surface_maps_vs_WOA/po4 created. INFO [193875] Creating tasks for diagnostic diag_surface_maps_no_data INFO [193875] Creating diagnostic task diag_surface_maps_no_data/Global_Ocean_surface_map INFO [193875] Creating preprocessor task diag_surface_maps_no_data/intpp INFO [193875] Creating preprocessor 'prep_surface_map_regrid_2D' task for variable 'intpp' INFO [193875] Found input files for NorESM2-MM INFO [193875] PreprocessingTask diag_surface_maps_no_data/intpp created. INFO [193875] Creating preprocessor task diag_surface_maps_no_data/fgco2 INFO [193875] Creating preprocessor 'prep_surface_map_regrid_2D' task for variable 'fgco2' INFO [193875] Found input files for NorESM2-MM INFO [193875] PreprocessingTask diag_surface_maps_no_data/fgco2 created. INFO [193875] Creating preprocessor task diag_surface_maps_no_data/chl INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'chl' INFO [193875] Found input files for NorESM2-MM INFO [193875] PreprocessingTask diag_surface_maps_no_data/chl created. INFO [193875] Creating preprocessor task diag_surface_maps_no_data/dfe INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'dfe' INFO [193875] Found input files for NorESM2-MM INFO [193875] PreprocessingTask diag_surface_maps_no_data/dfe created. INFO [193875] Creating preprocessor task diag_surface_maps_no_data/po4 INFO [193875] Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'po4' INFO [193875] Found input files for NorESM2-MM INFO [193875] PreprocessingTask diag_surface_maps_no_data/po4 created. INFO [193875] These tasks will be executed: diag_surface_maps_vs_WOA/thetao, diag_surface_maps_no_data/fgco2, diag_surface_maps_no_data/po4, diag_surface_maps_no_data/intpp, diag_surface_maps_no_data/Global_Ocean_surface_map, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_surface_maps_no_data/dfe, diag_surface_maps_vs_WOA/so, diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs, diag_surface_maps_vs_WOA/po4, diag_surface_maps_vs_WOA/si, diag_surface_maps_no_data/chl, diag_surface_maps_vs_WOA/o2 INFO [193875] Running 13 tasks using 8 processes INFO [194016] Starting task diag_surface_maps_vs_WOA/thetao in process [194016] INFO [194017] Starting task diag_surface_maps_vs_WOA/so in process [194017] INFO [194020] Starting task diag_surface_maps_vs_WOA/po4 in process [194020] INFO [194018] Starting task diag_surface_maps_vs_WOA/si in process [194018] INFO [194019] Starting task diag_surface_maps_vs_WOA/o2 in process [194019] INFO [194023] Starting task diag_surface_maps_no_data/chl in process [194023] INFO [194021] Starting task diag_surface_maps_no_data/intpp in process [194021] INFO [194022] Starting task diag_surface_maps_no_data/fgco2 in process [194022] INFO [193875] Progress: 8 tasks running, 5 tasks waiting for ancestors, 0/13 done WARNING [194017] There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc WARNING [194017] There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc WARNING [194017] There were warnings in variable so: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_so_200001-200012.nc WARNING [194019] There were warnings in variable o2: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc WARNING [194019] There were warnings in variable o2: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc WARNING [194019] There were warnings in variable o2: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_o2_200001-200012.nc WARNING [194022] There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/fgco2/gn/latest/fgco2_Omon_NorESM2-MM_historical_r1i1p1f1_gn_200001-200912.nc WARNING [194022] There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file INFO [194021] Successfully completed task diag_surface_maps_no_data/intpp (priority 8) in 0:00:26.756147 INFO [193875] Progress: 7 tasks running, 5 tasks waiting for ancestors, 1/13 done INFO [194021] Starting task diag_surface_maps_no_data/dfe in process [194021] INFO [193875] Progress: 8 tasks running, 4 tasks waiting for ancestors, 1/13 done INFO [194022] Successfully completed task diag_surface_maps_no_data/fgco2 (priority 9) in 0:00:28.293494 INFO [193875] Progress: 7 tasks running, 4 tasks waiting for ancestors, 2/13 done INFO [194022] Starting task diag_surface_maps_no_data/po4 in process [194022] INFO [193875] Progress: 8 tasks running, 3 tasks waiting for ancestors, 2/13 done INFO [194023] Successfully completed task diag_surface_maps_no_data/chl (priority 10) in 0:00:35.275000 INFO [193875] Progress: 7 tasks running, 3 tasks waiting for ancestors, 3/13 done WARNING [194020] There were warnings in variable po4: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_po4_200001-200012.nc WARNING [194020] There were warnings in variable po4: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_po4_200001-200012.nc WARNING [194020] There were warnings in variable po4: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_po4_200001-200012.nc INFO [194020] Successfully completed task diag_surface_maps_vs_WOA/po4 (priority 6) in 0:00:38.868816 INFO [193875] Progress: 6 tasks running, 3 tasks waiting for ancestors, 4/13 done WARNING [194018] There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc WARNING [194018] There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc WARNING [194018] There were warnings in variable si: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_si_200001-200012.nc INFO [194018] Successfully completed task diag_surface_maps_vs_WOA/si (priority 4) in 0:00:43.232680 INFO [193875] Progress: 5 tasks running, 3 tasks waiting for ancestors, 5/13 done WARNING [194016] There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/ESGF_betzy/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc WARNING [194016] There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc WARNING [194016] There were warnings in variable thetao: Coordinate lev units meters converted to m loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS6_WOA_clim_2018_Omon_thetao_200001-200012.nc INFO [194017] Successfully completed task diag_surface_maps_vs_WOA/so (priority 3) in 0:00:44.839920 INFO [194016] Successfully completed task diag_surface_maps_vs_WOA/thetao (priority 2) in 0:00:44.903214 INFO [193875] Progress: 3 tasks running, 3 tasks waiting for ancestors, 7/13 done INFO [194019] Successfully completed task diag_surface_maps_vs_WOA/o2 (priority 5) in 0:00:47.978438 INFO [193875] Progress: 2 tasks running, 3 tasks waiting for ancestors, 8/13 done INFO [194020] Starting task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs in process [194020] INFO [194020] Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml'] INFO [194020] Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs INFO [194020] Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs INFO [194020] Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/log.txt INFO [194020] To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml INFO [193875] Progress: 4 tasks running, 1 tasks waiting for ancestors, 8/13 done INFO [194023] Starting task diag_surface_maps_vs_WOA/Global_Ocean_surface_map in process [194023] INFO [194023] Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml'] INFO [194023] Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [194023] Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map INFO [194023] Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/log.txt INFO [194023] To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml INFO [194023] Maximum memory used (estimate): 0.4 GB INFO [194023] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [194023] Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_surface_map (priority 0) in 0:00:16.145447 INFO [193875] Progress: 3 tasks running, 1 tasks waiting for ancestors, 9/13 done INFO [194020] Maximum memory used (estimate): 0.4 GB INFO [194020] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [194021] Successfully completed task diag_surface_maps_no_data/dfe (priority 11) in 0:00:42.085563 INFO [193875] Progress: 2 tasks running, 1 tasks waiting for ancestors, 10/13 done INFO [194020] Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs (priority 1) in 0:00:20.962067 INFO [193875] Progress: 1 tasks running, 1 tasks waiting for ancestors, 11/13 done INFO [194022] Successfully completed task diag_surface_maps_no_data/po4 (priority 12) in 0:00:42.726070 INFO [193875] Progress: 0 tasks running, 1 tasks waiting for ancestors, 12/13 done INFO [194018] Starting task diag_surface_maps_no_data/Global_Ocean_surface_map in process [194018] INFO [194018] Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml'] INFO [194018] Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/work/diag_surface_maps_no_data/Global_Ocean_surface_map INFO [194018] Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/plots/diag_surface_maps_no_data/Global_Ocean_surface_map INFO [194018] Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_no_data/Global_Ocean_surface_map/log.txt INFO [194018] To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_no_data/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml INFO [193875] Progress: 1 tasks running, 0 tasks waiting for ancestors, 12/13 done INFO [194018] Maximum memory used (estimate): 0.3 GB INFO [194018] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [194018] Successfully completed task diag_surface_maps_no_data/Global_Ocean_surface_map (priority 7) in 0:00:12.477817 INFO [193875] Progress: 0 tasks running, 0 tasks waiting for ancestors, 13/13 done INFO [193875] Successfully completed all tasks. INFO [193875] Wrote recipe output to: file:///projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_NorESM2_20230303_125706/index.html INFO [193875] Ending the Earth System Model Evaluation Tool at time: 2023-03-03 12:58:33 UTC INFO [193875] Time for running the recipe was: 0:01:25.353916 INFO [193875] Maximum memory used (estimate): 5.7 GB INFO [193875] Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. INFO [193875] Removing preproc containing preprocessed data INFO [193875] If this data is further needed, then INFO [193875] set remove_preproc_dir to false in config-user.yml INFO [193875] Run was successful