2023-05-09 08:33:07,389 UTC [2820777] INFO esmvalcore._main:473 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2023-05-09 08:33:07,389 UTC [2820777] INFO esmvalcore._main:474 Package versions 2023-05-09 08:33:07,389 UTC [2820777] INFO esmvalcore._main:475 ---------------- 2023-05-09 08:33:07,389 UTC [2820777] INFO esmvalcore._main:476 ESMValCore: 2.7.1 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:478 ESMValTool: 2.7.0 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:479 ---------------- 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:480 Using config file /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/config-ipcc_node-270.yml 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:481 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/main_log_debug.txt 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:86 Starting the Earth System Model Evaluation Tool at time: 2023-05-09 08:33:07 UTC 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:90 ---------------------------------------------------------------------- 2023-05-09 08:33:07,390 UTC [2820777] INFO esmvalcore._main:91 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/recipe_ocean_bgc.yml 2023-05-09 08:33:07,391 UTC [2820777] INFO esmvalcore._main:92 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run 2023-05-09 08:33:07,391 UTC [2820777] INFO esmvalcore._main:93 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work 2023-05-09 08:33:07,391 UTC [2820777] INFO esmvalcore._main:94 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc 2023-05-09 08:33:07,391 UTC [2820777] INFO esmvalcore._main:95 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots 2023-05-09 08:33:07,391 UTC [2820777] INFO esmvalcore._main:96 ---------------------------------------------------------------------- 2023-05-09 08:33:07,392 UTC [2820777] INFO esmvalcore._main:100 Running tasks using at most 8 processes 2023-05-09 08:33:07,393 UTC [2820777] INFO esmvalcore._main:102 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2023-05-09 08:33:07,393 UTC [2820777] INFO esmvalcore._main:105 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2023-05-09 08:33:07,394 UTC [2820777] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvalcore/recipe_schema.yml 2023-05-09 08:33:07,478 UTC [2820777] DEBUG esmvalcore._recipe:1342 Retrieving diagnostics from recipe 2023-05-09 08:33:07,478 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 08:33:07,479 UTC [2820777] DEBUG esmvalcore._config._config:48 Loading extra facets from /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvalcore/_config/extra_facets/cmip5-institutes.yml 2023-05-09 08:33:07,596 UTC [2820777] DEBUG esmvalcore._config._config:48 Loading extra facets from /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvalcore/_config/extra_facets/cmip5-product.yml 2023-05-09 08:33:07,603 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 08:33:07,603 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 08:33:07,604 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 08:33:07,604 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 08:33:07,604 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 08:33:07,604 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 08:33:07,605 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 08:33:07,605 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_scalars 2023-05-09 08:33:07,605 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_scalars 2023-05-09 08:33:07,606 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_profile_vs_WOA 2023-05-09 08:33:07,606 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_profile_vs_WOA 2023-05-09 08:33:07,606 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_profile_no_obs 2023-05-09 08:33:07,607 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_profile_no_obs 2023-05-09 08:33:07,607 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_surface_maps_vs_WOA 2023-05-09 08:33:07,608 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_surface_maps_vs_WOA 2023-05-09 08:33:07,608 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_surface_maps_no_data 2023-05-09 08:33:07,608 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_surface_maps_no_data 2023-05-09 08:33:07,609 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_transect_vs_WOA 2023-05-09 08:33:07,609 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_transect_vs_WOA 2023-05-09 08:33:07,609 UTC [2820777] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_transect_no_data 2023-05-09 08:33:07,610 UTC [2820777] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_transect_no_data 2023-05-09 08:33:07,610 UTC [2820777] INFO esmvalcore._recipe:1845 Creating tasks from recipe 2023-05-09 08:33:07,610 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 08:33:07,610 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:07,610 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/thetao 2023-05-09 08:33:07,611 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'thetao' 2023-05-09 08:33:07,615 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,617 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:07,617 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:07,617 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:07,619 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 08:33:07,621 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:07,622 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:07,624 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,624 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,625 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 08:33:07,625 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,626 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:07,626 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:07,718 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao created. 2023-05-09 08:33:07,718 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:07,718 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/so 2023-05-09 08:33:07,718 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'so' 2023-05-09 08:33:07,719 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,719 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:07,719 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:07,720 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:07,720 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 08:33:07,721 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:07,721 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:07,722 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,722 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,723 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 08:33:07,723 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,724 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:07,724 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:07,860 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so created. 2023-05-09 08:33:07,860 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:07,860 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/no3 2023-05-09 08:33:07,860 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'no3' 2023-05-09 08:33:07,861 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,861 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:07,862 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:07,862 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:07,863 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 08:33:07,863 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:07,863 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:07,864 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:07,864 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,865 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 08:33:07,865 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:07,866 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:07,866 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,029 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 created. 2023-05-09 08:33:08,029 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:08,030 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/o2 2023-05-09 08:33:08,030 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'o2' 2023-05-09 08:33:08,030 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,031 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:08,031 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,031 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,032 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 08:33:08,032 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,032 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,072 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,072 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,072 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 08:33:08,072 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,073 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:08,073 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,202 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 created. 2023-05-09 08:33:08,202 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:08,202 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/si 2023-05-09 08:33:08,202 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'si' 2023-05-09 08:33:08,203 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,203 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:08,204 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,204 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,204 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 08:33:08,205 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,205 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,250 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,250 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,251 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 08:33:08,251 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,252 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:08,252 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,386 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si created. 2023-05-09 08:33:08,386 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:08,386 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 08:33:08,386 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 08:33:08,387 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/chl 2023-05-09 08:33:08,387 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'chl' 2023-05-09 08:33:08,387 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,387 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:08,388 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,388 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,388 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 08:33:08,389 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,389 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,426 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/chl created. 2023-05-09 08:33:08,427 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:08,427 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/dfe 2023-05-09 08:33:08,427 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'dfe' 2023-05-09 08:33:08,428 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,428 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:08,429 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,429 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,430 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 08:33:08,431 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,431 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,474 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe created. 2023-05-09 08:33:08,474 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:08,475 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/talk 2023-05-09 08:33:08,475 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'talk' 2023-05-09 08:33:08,475 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 08:33:08,476 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 08:33:08,476 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,476 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,477 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 08:33:08,477 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,477 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,517 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/talk created. 2023-05-09 08:33:08,517 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:08,518 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 08:33:08,518 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 08:33:08,518 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/talk 2023-05-09 08:33:08,518 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'talk' 2023-05-09 08:33:08,518 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,520 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,520 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,520 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,520 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,521 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,521 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,521 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,522 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 08:33:08,522 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,522 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,524 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/talk created. 2023-05-09 08:33:08,524 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:08,524 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/intpp 2023-05-09 08:33:08,525 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_2D' task for variable 'intpp' 2023-05-09 08:33:08,525 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,525 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,526 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,526 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable intpp during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,526 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,526 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,526 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,527 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable intpp during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,528 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2023-05-09 08:33:08,528 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:08,528 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,567 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp created. 2023-05-09 08:33:08,567 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:08,568 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/chl 2023-05-09 08:33:08,568 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'chl' 2023-05-09 08:33:08,568 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,569 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,569 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,569 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,569 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,570 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,570 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,570 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,571 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 08:33:08,571 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,571 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,573 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/chl created. 2023-05-09 08:33:08,573 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:08,573 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/areacello 2023-05-09 08:33:08,573 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 08:33:08,574 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,574 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:08,574 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,576 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello created. 2023-05-09 08:33:08,576 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:08,576 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 08:33:08,576 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:08,576 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/thetao 2023-05-09 08:33:08,576 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'thetao' 2023-05-09 08:33:08,577 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,577 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,578 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,578 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,578 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,578 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,579 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,579 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,579 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 08:33:08,580 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,580 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,581 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,581 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,582 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,582 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,582 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,583 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,583 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,583 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:08,583 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,592 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao created. 2023-05-09 08:33:08,592 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:08,593 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/so 2023-05-09 08:33:08,593 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'so' 2023-05-09 08:33:08,593 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,594 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,594 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,594 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,594 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,595 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,595 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,595 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,596 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 08:33:08,596 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,596 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,597 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,598 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,598 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,598 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,598 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,599 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,599 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,599 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:08,599 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,608 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so created. 2023-05-09 08:33:08,608 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:08,609 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/no3 2023-05-09 08:33:08,609 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'no3' 2023-05-09 08:33:08,609 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,610 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,610 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,610 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,610 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,611 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,611 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,611 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,612 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 08:33:08,612 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,612 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,613 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,613 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,614 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,614 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,614 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,614 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,614 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,615 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:08,615 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,624 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 created. 2023-05-09 08:33:08,624 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:08,624 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/o2 2023-05-09 08:33:08,624 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'o2' 2023-05-09 08:33:08,625 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,625 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,626 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,626 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,626 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,626 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,627 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,627 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,627 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 08:33:08,627 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,627 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,628 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,629 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,629 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,629 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,629 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,630 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,630 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,630 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:08,630 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,639 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 created. 2023-05-09 08:33:08,639 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:08,640 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/si 2023-05-09 08:33:08,640 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'si' 2023-05-09 08:33:08,640 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,641 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,641 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,641 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,641 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,642 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,642 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,642 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,642 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 08:33:08,643 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,643 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,644 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,644 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,644 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,644 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,645 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,645 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,645 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,646 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:08,646 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,655 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si created. 2023-05-09 08:33:08,655 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:08,655 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/areacello 2023-05-09 08:33:08,655 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 08:33:08,656 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,656 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:08,656 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,658 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello created. 2023-05-09 08:33:08,658 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:08,658 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_scalars 2023-05-09 08:33:08,658 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_scalars/Scalar_timeseries 2023-05-09 08:33:08,658 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_scalars/mfo 2023-05-09 08:33:08,659 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_scalar' task for variable 'mfo' 2023-05-09 08:33:08,659 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['mfo_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo'] 2023-05-09 08:33:08,660 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable mfo of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 08:33:08,660 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,661 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_scalars/mfo created. 2023-05-09 08:33:08,662 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_scalars/mfo will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 08:33:08,662 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_profile_vs_WOA 2023-05-09 08:33:08,662 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 08:33:08,662 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/thetao 2023-05-09 08:33:08,662 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'thetao' 2023-05-09 08:33:08,663 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,663 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,663 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,664 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,664 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,664 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,664 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,664 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,665 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 08:33:08,665 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,666 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,667 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,667 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,667 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,667 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,667 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,668 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,668 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,668 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:08,668 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,677 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/thetao created. 2023-05-09 08:33:08,677 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:08,678 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/so 2023-05-09 08:33:08,678 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'so' 2023-05-09 08:33:08,678 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,679 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,679 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,679 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,679 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,680 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,680 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,680 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,680 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 08:33:08,681 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,681 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,682 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,682 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,683 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,683 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,683 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,683 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,684 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,684 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:08,684 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,693 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/so created. 2023-05-09 08:33:08,693 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:08,693 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/no3 2023-05-09 08:33:08,694 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'no3' 2023-05-09 08:33:08,694 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,694 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,695 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,695 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,695 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,695 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,696 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,696 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,696 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 08:33:08,696 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,696 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,697 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,698 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,698 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,698 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,698 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,699 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,699 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,699 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:08,699 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,708 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/no3 created. 2023-05-09 08:33:08,708 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:08,709 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/o2 2023-05-09 08:33:08,709 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'o2' 2023-05-09 08:33:08,709 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,710 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,710 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,710 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,710 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,711 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,711 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,711 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,711 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 08:33:08,712 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,712 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,713 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,713 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,713 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,713 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,714 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,714 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,714 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,715 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:08,715 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,723 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/o2 created. 2023-05-09 08:33:08,724 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:08,724 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/si 2023-05-09 08:33:08,724 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'si' 2023-05-09 08:33:08,724 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,725 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,725 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,725 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,726 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,726 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,726 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,726 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,727 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 08:33:08,727 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,727 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,728 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,728 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,729 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 08:33:08,729 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,729 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,729 UTC [2820777] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 08:33:08,729 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,730 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:08,730 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,739 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/si created. 2023-05-09 08:33:08,739 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:08,739 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_profile_no_obs 2023-05-09 08:33:08,739 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:08,739 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/chl 2023-05-09 08:33:08,740 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'chl' 2023-05-09 08:33:08,740 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,740 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,741 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,741 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,741 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,741 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,742 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,742 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,742 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 08:33:08,742 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,742 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,744 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/chl created. 2023-05-09 08:33:08,744 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:08,745 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/dfe 2023-05-09 08:33:08,745 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'dfe' 2023-05-09 08:33:08,745 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,746 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,746 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,746 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,746 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,747 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,747 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,747 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,747 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 08:33:08,748 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,748 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,749 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/dfe created. 2023-05-09 08:33:08,749 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:08,750 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/talk 2023-05-09 08:33:08,750 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'talk' 2023-05-09 08:33:08,750 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 08:33:08,751 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 08:33:08,751 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,751 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,751 UTC [2820777] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 08:33:08,752 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,752 UTC [2820777] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 08:33:08,752 UTC [2820777] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 08:33:08,752 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 08:33:08,753 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,753 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,754 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/talk created. 2023-05-09 08:33:08,755 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:08,755 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_surface_maps_vs_WOA 2023-05-09 08:33:08,755 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 08:33:08,755 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 08:33:08,755 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/thetao 2023-05-09 08:33:08,755 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'thetao' 2023-05-09 08:33:08,756 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 08:33:08,757 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,757 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,758 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,759 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:08,759 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,768 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/thetao created. 2023-05-09 08:33:08,768 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:08,768 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/so 2023-05-09 08:33:08,768 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'so' 2023-05-09 08:33:08,769 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 08:33:08,770 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,770 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,771 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,771 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:08,772 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,781 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/so created. 2023-05-09 08:33:08,781 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:08,781 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/no3 2023-05-09 08:33:08,781 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'no3' 2023-05-09 08:33:08,782 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 08:33:08,782 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,782 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,783 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,784 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:08,784 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,793 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/no3 created. 2023-05-09 08:33:08,793 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:08,793 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/si 2023-05-09 08:33:08,793 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'si' 2023-05-09 08:33:08,794 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 08:33:08,794 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,795 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,796 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,796 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:08,796 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,805 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/si created. 2023-05-09 08:33:08,805 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:08,806 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/o2 2023-05-09 08:33:08,806 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'o2' 2023-05-09 08:33:08,807 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 08:33:08,807 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,807 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,808 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,809 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:08,809 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,818 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/o2 created. 2023-05-09 08:33:08,818 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:08,818 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/areacello 2023-05-09 08:33:08,818 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 08:33:08,819 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,819 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:08,819 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,821 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/areacello created. 2023-05-09 08:33:08,821 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:08,821 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_surface_maps_no_data 2023-05-09 08:33:08,821 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 08:33:08,821 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/intpp 2023-05-09 08:33:08,822 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_2D' task for variable 'intpp' 2023-05-09 08:33:08,822 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2023-05-09 08:33:08,822 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:08,823 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,824 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/intpp created. 2023-05-09 08:33:08,824 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/intpp will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:08,825 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/fgco2 2023-05-09 08:33:08,825 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_2D' task for variable 'fgco2' 2023-05-09 08:33:08,826 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['fgco2_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2'] 2023-05-09 08:33:08,826 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable fgco2 of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:08,826 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,866 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/fgco2 created. 2023-05-09 08:33:08,867 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/fgco2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 08:33:08,867 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/chl 2023-05-09 08:33:08,867 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_3D' task for variable 'chl' 2023-05-09 08:33:08,868 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 08:33:08,868 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,868 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,870 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/chl created. 2023-05-09 08:33:08,870 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:08,870 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/dfe 2023-05-09 08:33:08,870 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_3D' task for variable 'dfe' 2023-05-09 08:33:08,871 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 08:33:08,871 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,871 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,873 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/dfe created. 2023-05-09 08:33:08,873 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:08,874 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/areacello 2023-05-09 08:33:08,874 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 08:33:08,874 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 08:33:08,874 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:08,875 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,876 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/areacello created. 2023-05-09 08:33:08,876 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:08,876 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_transect_vs_WOA 2023-05-09 08:33:08,877 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 08:33:08,877 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/thetao 2023-05-09 08:33:08,877 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'thetao' 2023-05-09 08:33:08,878 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 08:33:08,878 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,878 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,879 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,880 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:08,880 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,889 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/thetao created. 2023-05-09 08:33:08,889 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:08,890 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/so 2023-05-09 08:33:08,890 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'so' 2023-05-09 08:33:08,891 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 08:33:08,891 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:08,891 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,892 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,893 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:08,893 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,902 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/so created. 2023-05-09 08:33:08,902 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:08,903 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/no3 2023-05-09 08:33:08,903 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'no3' 2023-05-09 08:33:08,903 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 08:33:08,904 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,904 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,905 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,905 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:08,906 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,915 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/no3 created. 2023-05-09 08:33:08,915 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:08,915 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/si 2023-05-09 08:33:08,915 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'si' 2023-05-09 08:33:08,916 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 08:33:08,916 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,916 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,917 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,918 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:08,918 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,927 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/si created. 2023-05-09 08:33:08,927 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:08,928 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/o2 2023-05-09 08:33:08,928 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'o2' 2023-05-09 08:33:08,928 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 08:33:08,929 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,929 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 08:33:08,930 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 08:33:08,930 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:08,930 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 08:33:08,940 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/o2 created. 2023-05-09 08:33:08,940 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:08,940 UTC [2820777] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_transect_no_data 2023-05-09 08:33:08,940 UTC [2820777] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_transect_no_data/Transects_no_data 2023-05-09 08:33:08,941 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_no_data/chl 2023-05-09 08:33:08,941 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'chl' 2023-05-09 08:33:08,941 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 08:33:08,942 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,942 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,943 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_no_data/chl created. 2023-05-09 08:33:08,944 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_no_data/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:08,944 UTC [2820777] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_no_data/dfe 2023-05-09 08:33:08,944 UTC [2820777] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'dfe' 2023-05-09 08:33:08,945 UTC [2820777] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 08:33:08,945 UTC [2820777] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:08,945 UTC [2820777] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 08:33:08,947 UTC [2820777] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_no_data/dfe created. 2023-05-09 08:33:08,947 UTC [2820777] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_no_data/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:08,947 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_volume_average_vs_WOA script Global_Volume_Average_timeseries 2023-05-09 08:33:08,948 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/thetao matches ['diag_timeseries_volume_average_vs_WOA/thetao'] 2023-05-09 08:33:08,948 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/so matches ['diag_timeseries_volume_average_vs_WOA/so'] 2023-05-09 08:33:08,948 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/no3 matches ['diag_timeseries_volume_average_vs_WOA/no3'] 2023-05-09 08:33:08,948 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/o2 matches ['diag_timeseries_volume_average_vs_WOA/o2'] 2023-05-09 08:33:08,949 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/si matches ['diag_timeseries_volume_average_vs_WOA/si'] 2023-05-09 08:33:08,949 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_volume_average_no_obs script Global_Volume_verage_timeseries 2023-05-09 08:33:08,949 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/chl matches ['diag_timeseries_volume_average_no_obs/chl'] 2023-05-09 08:33:08,949 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/dfe matches ['diag_timeseries_volume_average_no_obs/dfe'] 2023-05-09 08:33:08,949 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/talk matches ['diag_timeseries_volume_average_no_obs/talk'] 2023-05-09 08:33:08,950 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_surface_average_no_obs script Global_Volume_Average_timeseries 2023-05-09 08:33:08,950 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/talk matches ['diag_timeseries_surface_average_no_obs/talk'] 2023-05-09 08:33:08,950 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/intpp matches ['diag_timeseries_surface_average_no_obs/intpp'] 2023-05-09 08:33:08,950 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/chl matches ['diag_timeseries_surface_average_no_obs/chl'] 2023-05-09 08:33:08,951 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/areacello matches ['diag_timeseries_surface_average_no_obs/areacello'] 2023-05-09 08:33:08,951 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_surface_average_vs_WOA script Global_Volume_Average_timeseries 2023-05-09 08:33:08,951 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/thetao matches ['diag_timeseries_surface_average_vs_WOA/thetao'] 2023-05-09 08:33:08,951 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/so matches ['diag_timeseries_surface_average_vs_WOA/so'] 2023-05-09 08:33:08,951 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/no3 matches ['diag_timeseries_surface_average_vs_WOA/no3'] 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/o2 matches ['diag_timeseries_surface_average_vs_WOA/o2'] 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/si matches ['diag_timeseries_surface_average_vs_WOA/si'] 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/areacello matches ['diag_timeseries_surface_average_vs_WOA/areacello'] 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_scalars script Scalar_timeseries 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_scalars/mfo matches ['diag_timeseries_scalars/mfo'] 2023-05-09 08:33:08,952 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_profile_vs_WOA script Global_profile_vs_WOA 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/thetao matches ['diag_profile_vs_WOA/thetao'] 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/so matches ['diag_profile_vs_WOA/so'] 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/no3 matches ['diag_profile_vs_WOA/no3'] 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/o2 matches ['diag_profile_vs_WOA/o2'] 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/si matches ['diag_profile_vs_WOA/si'] 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_profile_no_obs script Global_profile_no_obs 2023-05-09 08:33:08,953 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/chl matches ['diag_profile_no_obs/chl'] 2023-05-09 08:33:08,954 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/dfe matches ['diag_profile_no_obs/dfe'] 2023-05-09 08:33:08,954 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/talk matches ['diag_profile_no_obs/talk'] 2023-05-09 08:33:08,954 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_surface_map 2023-05-09 08:33:08,954 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2023-05-09 08:33:08,954 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_model_vs_obs 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2023-05-09 08:33:08,955 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_no_data script Global_Ocean_surface_map 2023-05-09 08:33:08,956 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/intpp matches ['diag_surface_maps_no_data/intpp'] 2023-05-09 08:33:08,956 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/fgco2 matches ['diag_surface_maps_no_data/fgco2'] 2023-05-09 08:33:08,956 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/chl matches ['diag_surface_maps_no_data/chl'] 2023-05-09 08:33:08,956 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/dfe matches ['diag_surface_maps_no_data/dfe'] 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/areacello matches ['diag_surface_maps_no_data/areacello'] 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_transect_vs_WOA script Transects_vs_WOA 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/thetao matches ['diag_transect_vs_WOA/thetao'] 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/so matches ['diag_transect_vs_WOA/so'] 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/no3 matches ['diag_transect_vs_WOA/no3'] 2023-05-09 08:33:08,957 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/si matches ['diag_transect_vs_WOA/si'] 2023-05-09 08:33:08,958 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/o2 matches ['diag_transect_vs_WOA/o2'] 2023-05-09 08:33:08,958 UTC [2820777] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_transect_no_data script Transects_no_data 2023-05-09 08:33:08,958 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_no_data/chl matches ['diag_transect_no_data/chl'] 2023-05-09 08:33:08,958 UTC [2820777] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_no_data/dfe matches ['diag_transect_no_data/dfe'] 2023-05-09 08:33:08,958 UTC [2820777] INFO esmvalcore._recipe:1894 These tasks will be executed: diag_timeseries_volume_average_no_obs/dfe, diag_timeseries_volume_average_vs_WOA/thetao, diag_timeseries_surface_average_no_obs/intpp, diag_transect_vs_WOA/Transects_vs_WOA, diag_profile_vs_WOA/o2, diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries, diag_timeseries_scalars/Scalar_timeseries, diag_surface_maps_no_data/fgco2, diag_timeseries_surface_average_no_obs/chl, diag_timeseries_surface_average_vs_WOA/so, diag_profile_vs_WOA/Global_profile_vs_WOA, diag_profile_vs_WOA/so, diag_transect_vs_WOA/o2, diag_profile_no_obs/Global_profile_no_obs, diag_surface_maps_vs_WOA/si, diag_surface_maps_no_data/intpp, diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries, diag_timeseries_surface_average_vs_WOA/areacello, diag_profile_no_obs/chl, diag_timeseries_volume_average_vs_WOA/o2, diag_transect_vs_WOA/si, diag_timeseries_surface_average_no_obs/talk, diag_surface_maps_vs_WOA/so, diag_transect_no_data/dfe, diag_timeseries_volume_average_no_obs/chl, diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries, diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs, diag_transect_vs_WOA/so, diag_timeseries_volume_average_vs_WOA/no3, diag_timeseries_volume_average_vs_WOA/si, diag_surface_maps_vs_WOA/thetao, diag_profile_vs_WOA/no3, diag_timeseries_surface_average_vs_WOA/thetao, diag_timeseries_surface_average_no_obs/areacello, diag_profile_vs_WOA/thetao, diag_profile_no_obs/dfe, diag_transect_no_data/chl, diag_transect_vs_WOA/thetao, diag_timeseries_scalars/mfo, diag_timeseries_surface_average_vs_WOA/no3, diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries, diag_surface_maps_no_data/chl, diag_profile_vs_WOA/si, diag_surface_maps_vs_WOA/o2, diag_surface_maps_vs_WOA/no3, diag_surface_maps_no_data/areacello, diag_timeseries_volume_average_no_obs/talk, diag_profile_no_obs/talk, diag_surface_maps_no_data/Global_Ocean_surface_map, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_timeseries_surface_average_vs_WOA/o2, diag_transect_vs_WOA/no3, diag_surface_maps_vs_WOA/areacello, diag_transect_no_data/Transects_no_data, diag_surface_maps_no_data/dfe, diag_timeseries_volume_average_vs_WOA/so, diag_timeseries_surface_average_vs_WOA/si 2023-05-09 08:33:08,981 UTC [2820777] DEBUG esmvalcore._main:122 Recipe summary: DiagnosticTask: diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_profile_vs_WOA/Global_profile_vs_WOA script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_vs_WOA/Global_profile_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA', 'script': 'Global_profile_vs_WOA', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_profile_vs_WOA/Global_profile_vs_WOA'} ancestors: PreprocessingTask: diag_profile_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'script': 'Global_Volume_verage_timeseries', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None DiagnosticTask: diag_transect_vs_WOA/Transects_vs_WOA script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_transect_vs_WOA/Transects_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA', 'script': 'Transects_vs_WOA', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_transect_vs_WOA/Transects_vs_WOA'} ancestors: PreprocessingTask: diag_transect_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_no_data/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_no_data/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_no_data/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_no_data/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/fgco2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_profile_no_obs/Global_profile_no_obs script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_no_obs/Global_profile_no_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs', 'script': 'Global_profile_no_obs', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_profile_no_obs/Global_profile_no_obs'} ancestors: PreprocessingTask: diag_profile_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_transect_no_data/Transects_no_data script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_transect_no_data/Transects_no_data', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data', 'script': 'Transects_no_data', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_transect_no_data/Transects_no_data'} ancestors: PreprocessingTask: diag_transect_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs script: ocean/diagnostic_model_vs_obs.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'script': 'Global_Ocean_model_vs_obs', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None DiagnosticTask: diag_timeseries_scalars/Scalar_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries', 'script': 'Scalar_timeseries', 'version': '2.7.1', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_scalars/Scalar_timeseries'} ancestors: PreprocessingTask: diag_timeseries_scalars/mfo order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'}} ancestors: None 2023-05-09 08:33:09,103 UTC [2820777] INFO esmvalcore._task:747 Running 57 tasks using 8 processes 2023-05-09 08:33:09,179 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/thetao in process [2820945] 2023-05-09 08:33:09,180 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/so in process [2820946] 2023-05-09 08:33:09,180 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/no3 in process [2820947] 2023-05-09 08:33:09,180 UTC [2820948] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/o2 in process [2820948] 2023-05-09 08:33:09,181 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/chl in process [2820950] 2023-05-09 08:33:09,181 UTC [2820949] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/si in process [2820949] 2023-05-09 08:33:09,181 UTC [2820951] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/dfe in process [2820951] 2023-05-09 08:33:09,181 UTC [2820952] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/talk in process [2820952] 2023-05-09 08:33:09,184 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,184 UTC [2820951] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,184 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:09,185 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,184 UTC [2820951] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:09,185 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,185 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 08:33:09,185 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 08:33:09,185 UTC [2820952] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,185 UTC [2820952] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:09,186 UTC [2820945] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,186 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,186 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,187 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,187 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,186 UTC [2820945] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:09,187 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,187 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,187 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 08:33:09,187 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,187 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,187 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:09,187 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,187 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,187 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,187 UTC [2820948] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,187 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:09,187 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 08:33:09,187 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,188 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 08:33:09,187 UTC [2820948] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:09,188 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:09,188 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,188 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 08:33:09,188 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:09,189 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:09,189 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,189 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,189 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:09,189 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:09,189 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,189 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,189 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:09,189 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,189 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:09,189 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:09,189 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,189 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,190 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,190 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,190 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,191 UTC [2820949] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 08:33:09,191 UTC [2820949] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:09,192 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,193 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 08:33:09,194 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,195 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,195 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,246 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,246 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:09,246 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,246 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:09,246 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,246 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,249 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:09,249 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:09,249 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:09,249 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,249 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:09,249 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,252 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,253 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,253 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,254 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:09,254 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,254 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:09,254 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:09,254 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,254 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,254 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:09,255 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:09,255 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:09,255 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,255 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,255 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,256 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,256 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,256 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,257 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,257 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,258 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:09,259 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,260 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,260 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,260 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:09,261 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,261 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,261 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:09,261 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:09,261 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,261 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:09,261 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,261 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,261 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,261 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:09,262 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,262 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:09,262 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:09,262 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,262 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,262 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:09,262 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,263 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,263 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,263 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,263 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,263 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,263 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:09,263 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,264 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,265 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,268 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,269 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:09,269 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,270 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:09,270 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,271 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,271 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,272 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:09,272 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,276 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:09,277 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 49 tasks waiting for ancestors, 0/57 done 2023-05-09 08:33:09,280 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,283 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:09,286 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:09,291 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:09,293 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:09,295 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:09,300 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:09,303 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:09,304 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,305 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:09,306 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,306 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,306 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,306 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,306 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,306 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:09,308 UTC [2820945] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of thetao. 2023-05-09 08:33:09,308 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,308 UTC [2820948] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of o2. 2023-05-09 08:33:09,308 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,308 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of so. 2023-05-09 08:33:09,308 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,308 UTC [2820949] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of si. 2023-05-09 08:33:09,308 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,310 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,311 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:09,311 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,312 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:09,312 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,312 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:09,313 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,313 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:09,313 UTC [2820947] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 08:33:09,313 UTC [2820947] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 08:33:09,314 UTC [2820947] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 08:33:09,756 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:09,757 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:09,757 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:09,758 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:09,788 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,788 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,794 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:09,801 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,804 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:09,804 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,806 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:09,808 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,810 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,818 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,820 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:09,821 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,822 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:09,823 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,825 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,826 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,842 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:09,843 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:09,843 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:09,844 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,845 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 08:33:09,846 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:09,848 UTC [2820951] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of dfe. 2023-05-09 08:33:09,848 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,859 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:09,859 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 08:33:09,889 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,889 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,893 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:09,896 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,897 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:09,898 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,898 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:09,899 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,900 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,904 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,905 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:09,905 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,906 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:09,906 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,907 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,907 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,915 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,917 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of chl. 2023-05-09 08:33:09,917 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:09,942 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:09,943 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:09,943 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 08:33:09,944 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:09,944 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:09,944 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,969 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:09,969 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:09,972 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:09,975 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:09,977 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:09,977 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:09,978 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:09,978 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:09,979 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:09,983 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:09,984 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:09,984 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:09,985 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:09,985 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:09,986 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:09,986 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,994 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:09,996 UTC [2820952] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of talk. 2023-05-09 08:33:09,996 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:10,000 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:10,000 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:10,002 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:10,004 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:10,006 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:10,006 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:10,007 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:10,007 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:10,008 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:10,011 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:10,012 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:10,012 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:10,013 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:10,013 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:10,014 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 08:33:10,014 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:10,022 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:10,024 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of no3. 2023-05-09 08:33:10,024 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:10,140 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,186 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,247 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,311 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,649 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:10,650 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:10,650 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:10,652 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 08:33:10,653 UTC [2820948] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:10,666 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:10,666 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 08:33:10,714 UTC [2820948] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:10,714 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:10,715 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:10,715 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:10,715 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:10,716 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:10,716 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,716 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,733 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,733 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,733 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,746 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,746 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,746 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,758 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:10,758 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:10,762 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:10,766 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:10,769 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:10,774 UTC [2820948] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:10,778 UTC [2820948] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:10,781 UTC [2820948] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:10,783 UTC [2820948] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:10,787 UTC [2820948] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:10,789 UTC [2820948] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:10,791 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:10,791 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:10,793 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:10,793 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:10,796 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:10,797 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:10,798 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:10,798 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:10,799 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:10,799 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:10,799 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:10,800 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,800 UTC [2820948] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 08:33:10,800 UTC [2820948] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 08:33:10,800 UTC [2820948] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 08:33:10,853 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:10,854 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:10,855 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:10,856 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 08:33:10,857 UTC [2820949] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:10,872 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:10,872 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 08:33:10,915 UTC [2820949] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:10,916 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:10,916 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:10,916 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:10,917 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:10,917 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:10,917 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,917 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,928 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,928 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,928 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,930 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:10,931 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:10,931 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:10,933 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 08:33:10,934 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:10,940 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,940 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:10,940 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,947 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:10,947 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 08:33:10,951 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:10,953 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:10,953 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:10,954 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 08:33:10,955 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:10,955 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:10,954 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:10,958 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:10,961 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:10,964 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:10,967 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:10,967 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 08:33:10,968 UTC [2820949] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:10,972 UTC [2820949] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:10,975 UTC [2820949] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:10,977 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/no3 (priority 3) in 0:00:01.796779 2023-05-09 08:33:10,977 UTC [2820949] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:10,981 UTC [2820949] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:10,983 UTC [2820949] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:10,984 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:10,985 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:10,986 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:10,987 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:10,989 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:10,990 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:10,990 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:10,991 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:10,991 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:10,992 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:10,992 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:10,993 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:10,993 UTC [2820949] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 08:33:10,993 UTC [2820949] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 08:33:10,993 UTC [2820949] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 08:33:10,996 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/chl (priority 7) in 0:00:01.814971 2023-05-09 08:33:11,081 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 49 tasks waiting for ancestors, 1/57 done 2023-05-09 08:33:11,081 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,082 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:11,082 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,083 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/talk in process [2820947] 2023-05-09 08:33:11,084 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 08:33:11,084 UTC [2820952] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:11,085 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:11,086 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,088 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,089 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:11,089 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,091 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 08:33:11,091 UTC [2820951] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:11,098 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,099 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 08:33:11,099 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,099 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,101 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:11,104 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,104 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,104 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 08:33:11,105 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:11,105 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,106 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:11,107 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,108 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,110 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,111 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,111 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:11,111 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,112 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:11,112 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,113 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 08:33:11,113 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:11,113 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,113 UTC [2820948] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:11,114 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,114 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,119 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,120 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of talk and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:11,120 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,123 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,123 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 08:33:11,124 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,126 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 08:33:11,126 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,133 UTC [2820948] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/o2 (priority 4) in 0:00:01.952297 2023-05-09 08:33:11,139 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:11,151 UTC [2820952] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/talk (priority 9) in 0:00:01.969474 2023-05-09 08:33:11,157 UTC [2820951] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/dfe (priority 8) in 0:00:01.975186 2023-05-09 08:33:11,182 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 48 tasks waiting for ancestors, 2/57 done 2023-05-09 08:33:11,183 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/intpp in process [2820950] 2023-05-09 08:33:11,186 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,187 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:11,187 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,187 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed' 2023-05-09 08:33:11,188 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,188 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:11,188 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:11,203 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:11,204 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,205 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 08:33:11,222 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,224 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:11,224 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,225 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 08:33:11,230 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,231 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,240 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,241 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 08:33:11,242 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,243 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 08:33:11,243 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,245 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,245 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,251 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,252 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of intpp and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 216, 360) 2023-05-09 08:33:11,252 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,257 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,258 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of intpp. 2023-05-09 08:33:11,259 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:11,278 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:11,282 UTC [2820777] INFO esmvalcore._task:779 Progress: 5 tasks running, 47 tasks waiting for ancestors, 5/57 done 2023-05-09 08:33:11,294 UTC [2820952] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/chl in process [2820952] 2023-05-09 08:33:11,295 UTC [2820951] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/areacello in process [2820951] 2023-05-09 08:33:11,296 UTC [2820948] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries in process [2820948] 2023-05-09 08:33:11,298 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,299 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:11,299 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,298 UTC [2820951] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 08:33:11,298 UTC [2820952] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,300 UTC [2820951] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:11,300 UTC [2820952] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:11,300 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,300 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 08:33:11,300 UTC [2820948] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml'] 2023-05-09 08:33:11,300 UTC [2820948] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:11,301 UTC [2820948] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 08:33:11,301 UTC [2820948] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 08:33:11,300 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,301 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 08:33:11,301 UTC [2820948] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 08:33:11,300 UTC [2820949] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:11,301 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,301 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 08:33:11,301 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,301 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 08:33:11,301 UTC [2820948] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/log.txt 2023-05-09 08:33:11,301 UTC [2820948] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml 2023-05-09 08:33:11,302 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,302 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:11,302 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,311 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,311 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,312 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:11,312 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,313 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:11,313 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,314 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:11,314 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,314 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 08:33:11,314 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,315 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:11,315 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,316 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:11,316 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,316 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:11,316 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,317 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:11,317 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,318 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 08:33:11,318 UTC [2820951] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:11,321 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,321 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,322 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:11,324 UTC [2820949] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/si (priority 5) in 0:00:02.142946 2023-05-09 08:33:11,325 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,326 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:11,326 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,327 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:11,328 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,328 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,329 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,329 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:11,329 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,330 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,330 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 08:33:11,331 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc' 2023-05-09 08:33:11,332 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,331 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:11,333 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:11,333 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,334 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:11,334 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,335 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,336 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,337 UTC [2820951] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/areacello (priority 14) in 0:00:00.041527 2023-05-09 08:33:11,341 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,341 UTC [2820952] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of chl and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:11,342 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,346 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,347 UTC [2820952] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 08:33:11,347 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,361 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:11,383 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 44 tasks waiting for ancestors, 5/57 done 2023-05-09 08:33:11,484 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 44 tasks waiting for ancestors, 7/57 done 2023-05-09 08:33:11,486 UTC [2820949] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/thetao in process [2820949] 2023-05-09 08:33:11,486 UTC [2820951] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/so in process [2820951] 2023-05-09 08:33:11,495 UTC [2820949] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,495 UTC [2820949] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:11,495 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,496 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 08:33:11,496 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,496 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:11,496 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:11,498 UTC [2820951] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,498 UTC [2820951] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:11,499 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,499 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:11,500 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:11,500 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:11,500 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,500 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:11,500 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,509 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,509 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed'] 2023-05-09 08:33:11,510 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:11,511 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,512 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:11,515 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,517 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:11,517 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,517 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,517 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:11,517 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,517 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:11,517 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/intpp (priority 12) in 0:00:00.333808 2023-05-09 08:33:11,518 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,519 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,522 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,523 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:11,523 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,564 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:11,565 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,566 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,566 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,571 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,572 UTC [2820949] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of thetao and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 08:33:11,572 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,576 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,578 UTC [2820949] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 08:33:11,578 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,578 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,578 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:11,578 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,585 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 42 tasks waiting for ancestors, 7/57 done 2023-05-09 08:33:11,588 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,589 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,590 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:11,592 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:11,593 UTC [2820951] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,595 UTC [2820951] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,596 UTC [2820951] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:11,596 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,599 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:11,604 UTC [2820951] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:11,609 UTC [2820951] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:11,611 UTC [2820951] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:11,614 UTC [2820951] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:11,619 UTC [2820951] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:11,622 UTC [2820951] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:11,623 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,624 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:11,625 UTC [2820951] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 08:33:11,625 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,626 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:11,629 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,630 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:11,632 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,633 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:11,633 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,634 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:11,634 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,635 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:11,639 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:11,640 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:11,640 UTC [2820951] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_salinity / (1.0) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:11,640 UTC [2820951] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:11,642 UTC [2820951] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_salinity / (1.0) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:11,643 UTC [2820951] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 08:33:11,654 UTC [2820951] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:11,655 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:11,656 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:11,656 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:11,657 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 08:33:11,658 UTC [2820951] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:11,685 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 42 tasks waiting for ancestors, 8/57 done 2023-05-09 08:33:11,687 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/no3 in process [2820950] 2023-05-09 08:33:11,695 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:11,695 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:11,695 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,695 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 08:33:11,696 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,696 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:11,696 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,712 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:11,713 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,715 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:11,719 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,721 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:11,722 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,723 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:11,724 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,725 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,727 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:11,727 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 08:33:11,728 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,729 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:11,729 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,730 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:11,730 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,732 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,732 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,733 UTC [2820951] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:11,733 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:11,733 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 08:33:11,734 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:11,734 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:11,734 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:11,738 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,739 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of no3 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:11,739 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,744 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,745 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 08:33:11,745 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,746 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:11,746 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:11,748 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:11,751 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:11,752 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:11,752 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:11,753 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:11,754 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:11,755 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:11,758 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:11,759 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:11,759 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:11,760 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:11,760 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:11,761 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:11,761 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:11,761 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,767 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,768 UTC [2820951] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of so and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 08:33:11,768 UTC [2820951] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,774 UTC [2820951] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:11,776 UTC [2820951] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 08:33:11,776 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:11,786 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 41 tasks waiting for ancestors, 8/57 done 2023-05-09 08:33:11,791 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:12,005 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 08:33:12,005 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:12,016 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:12,049 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:12,050 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:12,050 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:12,051 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 08:33:12,052 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:12,065 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:12,065 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 08:33:12,073 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/talk (priority 11) in 0:00:00.990086 2023-05-09 08:33:12,187 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 41 tasks waiting for ancestors, 9/57 done 2023-05-09 08:33:12,192 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/o2 in process [2820947] 2023-05-09 08:33:12,216 UTC [2820952] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 08:33:12,216 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:12,219 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:12,219 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:12,219 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:12,220 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 08:33:12,221 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:12,221 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:12,221 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:12,229 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:12,265 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:12,265 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:12,266 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:12,266 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:12,266 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:12,268 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 08:33:12,269 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:12,268 UTC [2820952] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:12,277 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:12,281 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:12,281 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 08:33:12,284 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:12,284 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:12,287 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:12,289 UTC [2820952] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/chl (priority 13) in 0:00:00.994007 2023-05-09 08:33:12,289 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 40 tasks waiting for ancestors, 9/57 done 2023-05-09 08:33:12,293 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:12,295 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:12,306 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:12,308 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:12,310 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:12,312 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:12,313 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:12,315 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:12,316 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:12,337 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:12,341 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of o2 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:12,341 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:12,358 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:12,362 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 08:33:12,362 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:12,383 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:12,392 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 40 tasks waiting for ancestors, 10/57 done 2023-05-09 08:33:12,406 UTC [2820952] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries in process [2820952] 2023-05-09 08:33:12,412 UTC [2820952] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 08:33:12,413 UTC [2820952] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:12,413 UTC [2820952] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 08:33:12,413 UTC [2820952] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 08:33:12,413 UTC [2820952] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 08:33:12,413 UTC [2820952] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/log.txt 2023-05-09 08:33:12,414 UTC [2820952] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml 2023-05-09 08:33:12,493 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 39 tasks waiting for ancestors, 10/57 done 2023-05-09 08:33:12,751 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 08:33:12,751 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:12,770 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:12,815 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:12,817 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:12,817 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:12,819 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 08:33:12,820 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:12,836 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:12,836 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 08:33:12,844 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:12,844 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:12,844 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:12,845 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:12,845 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:12,846 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:12,846 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:12,846 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,872 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,873 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:12,873 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,892 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,893 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:12,893 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,913 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:12,913 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:12,918 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:12,922 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:12,925 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:12,929 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:12,933 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:12,936 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:12,938 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:12,942 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:12,944 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:12,945 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:12,946 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:12,947 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:12,948 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:12,951 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:12,951 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:12,952 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:12,952 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:12,953 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:12,953 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:12,953 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:12,954 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:12,957 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:12,958 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:12,958 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:12,959 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:12,960 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:12,961 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 08:33:12,970 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:12,971 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:12,971 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:12,971 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:12,973 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 08:33:12,973 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:13,010 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,010 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 08:33:13,020 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/no3 (priority 18) in 0:00:01.332649 2023-05-09 08:33:13,195 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 39 tasks waiting for ancestors, 11/57 done 2023-05-09 08:33:13,208 UTC [2820947] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 08:33:13,222 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:13,233 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:13,264 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:13,265 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:13,265 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:13,267 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 08:33:13,267 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:13,224 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/si in process [2820950] 2023-05-09 08:33:13,279 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,279 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 08:33:13,283 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 08:33:13,283 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:13,283 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:13,283 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:13,283 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:13,284 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:13,284 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:13,284 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:13,284 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:13,284 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,284 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:13,284 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,284 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:13,285 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:13,285 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:13,285 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,285 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,296 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,296 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,296 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,298 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,299 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,299 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,307 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,307 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,307 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,313 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,313 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:13,314 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,318 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:13,318 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:13,321 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:13,322 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 38 tasks waiting for ancestors, 11/57 done 2023-05-09 08:33:13,324 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:13,324 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:13,324 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:13,327 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:13,327 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:13,330 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:13,330 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:13,333 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:13,334 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,336 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:13,336 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:13,338 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:13,340 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,343 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:13,343 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,345 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:13,346 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:13,347 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:13,345 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:13,348 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:13,348 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:13,351 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:13,349 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,352 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:13,352 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:13,352 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:13,353 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:13,353 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:13,353 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:13,353 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:13,354 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:13,354 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:13,354 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:13,354 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:13,355 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:13,357 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:13,358 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:13,358 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:13,359 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:13,359 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:13,359 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:13,359 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:13,360 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:13,360 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:13,360 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:13,360 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:13,360 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,361 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 08:33:13,361 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:13,364 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:13,365 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:13,366 UTC [2820947] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:13,366 UTC [2820947] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:13,367 UTC [2820947] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:13,368 UTC [2820947] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 08:33:13,370 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:13,370 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:13,371 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:13,371 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:13,372 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 08:33:13,373 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:13,378 UTC [2820947] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:13,378 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:13,379 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:13,379 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:13,380 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 08:33:13,381 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:13,412 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,412 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 08:33:13,416 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,417 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 08:33:13,417 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:13,417 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:13,418 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 08:33:13,418 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:13,418 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:13,418 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:13,427 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/o2 (priority 19) in 0:00:01.234144 2023-05-09 08:33:13,428 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:13,428 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:13,429 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:13,432 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:13,433 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:13,433 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:13,434 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:13,435 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:13,435 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:13,438 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:13,439 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:13,439 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:13,440 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:13,440 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:13,442 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:13,442 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,447 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,447 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of si and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:13,447 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,452 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,453 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 08:33:13,453 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:13,466 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:13,623 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 38 tasks waiting for ancestors, 12/57 done 2023-05-09 08:33:13,625 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/areacello in process [2820947] 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 08:33:13,628 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,634 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:13,635 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:13,635 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:13,636 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:13,637 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:13,637 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:13,637 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:13,638 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:13,638 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:13,639 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:13,639 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:13,639 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:13,640 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:13,640 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:13,640 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:13,641 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:13,641 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 08:33:13,642 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:13,654 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,654 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 08:33:13,661 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/areacello (priority 21) in 0:00:00.035940 2023-05-09 08:33:13,723 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 37 tasks waiting for ancestors, 12/57 done 2023-05-09 08:33:13,824 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 37 tasks waiting for ancestors, 13/57 done 2023-05-09 08:33:13,825 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_scalars/mfo in process [2820947] 2023-05-09 08:33:13,827 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 08:33:13,827 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 08:33:13,827 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:13,827 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed' 2023-05-09 08:33:13,828 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:13,828 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:13,828 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 08:33:13,832 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 08:33:13,833 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:13,834 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', check_level = 2023-05-09 08:33:13,869 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:13,870 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) 2023-05-09 08:33:13,870 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:13,871 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'mfo', frequency = 'mon', check_level = 2023-05-09 08:33:13,876 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:13,876 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:13,884 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:13,885 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', check_level = 2023-05-09 08:33:13,885 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:13,886 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'mfo', frequency = 'mon', check_level = 2023-05-09 08:33:13,886 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:13,887 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:13,887 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:13,887 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) 2023-05-09 08:33:13,887 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:13,888 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc' 2023-05-09 08:33:13,889 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 08:33:13,899 UTC [2820947] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/fileformats/netcdf.py:2890: FutureWarning: elementwise comparison failed; returning scalar instead, but in the future will perform elementwise comparison 2023-05-09 08:33:13,902 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:13,902 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed'] 2023-05-09 08:33:13,909 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_scalars/mfo (priority 23) in 0:00:00.084495 2023-05-09 08:33:13,924 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 36 tasks waiting for ancestors, 13/57 done 2023-05-09 08:33:14,024 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 36 tasks waiting for ancestors, 14/57 done 2023-05-09 08:33:14,026 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_timeseries_scalars/Scalar_timeseries in process [2820947] 2023-05-09 08:33:14,029 UTC [2820947] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries/settings.yml'] 2023-05-09 08:33:14,029 UTC [2820947] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:14,029 UTC [2820947] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 08:33:14,029 UTC [2820947] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 08:33:14,029 UTC [2820947] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 08:33:14,029 UTC [2820947] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries/log.txt 2023-05-09 08:33:14,029 UTC [2820947] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries/settings.yml 2023-05-09 08:33:14,124 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 35 tasks waiting for ancestors, 14/57 done 2023-05-09 08:33:14,173 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 08:33:14,174 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:14,189 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:14,281 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:14,282 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:14,282 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:14,283 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 08:33:14,284 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:14,296 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:14,296 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 08:33:14,306 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/si (priority 20) in 0:00:01.029531 2023-05-09 08:33:14,464 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 35 tasks waiting for ancestors, 15/57 done 2023-05-09 08:33:14,466 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/thetao in process [2820950] 2023-05-09 08:33:14,473 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:14,473 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:14,473 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:14,473 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:14,474 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:14,474 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:14,474 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:14,474 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:14,474 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,491 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,491 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:14,491 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,507 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,507 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:14,507 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,518 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:14,518 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:14,521 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:14,524 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:14,527 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:14,530 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:14,534 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:14,537 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:14,539 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:14,543 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:14,545 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:14,546 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:14,547 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:14,548 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:14,548 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:14,551 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:14,552 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:14,552 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:14,553 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:14,553 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:14,554 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:14,554 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:14,554 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:14,555 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:14,555 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:14,556 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:14,557 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 08:33:14,565 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 34 tasks waiting for ancestors, 15/57 done 2023-05-09 08:33:14,578 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:14,579 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:14,580 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:14,589 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:14,590 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:14,590 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:14,591 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 08:33:14,592 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:14,669 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:14,670 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:14,676 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:14,687 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:14,687 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:14,689 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:14,692 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:14,693 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:14,693 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:14,694 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:14,695 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:14,696 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:14,699 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:14,699 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:14,700 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:14,700 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:14,701 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:14,702 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:14,702 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:14,707 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:14,707 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of thetao and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 08:33:14,707 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:14,712 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:14,713 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 08:33:14,713 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:14,727 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:14,760 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:14,760 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:14,782 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:14,783 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:14,783 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:14,784 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 08:33:14,784 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:15,343 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:15,343 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 08:33:15,354 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/thetao (priority 25) in 0:00:00.887400 2023-05-09 08:33:15,466 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 34 tasks waiting for ancestors, 16/57 done 2023-05-09 08:33:15,468 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/so in process [2820950] 2023-05-09 08:33:15,474 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:15,474 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:15,474 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,475 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,488 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,488 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,488 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,499 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,499 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,499 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,510 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,510 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:15,514 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:15,515 UTC [2820950] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,516 UTC [2820950] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,517 UTC [2820950] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,517 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:15,520 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:15,523 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:15,527 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:15,529 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:15,531 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:15,536 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:15,538 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:15,539 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:15,540 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:15,541 UTC [2820950] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 08:33:15,541 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:15,541 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:15,544 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:15,545 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:15,546 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:15,547 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:15,547 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:15,547 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:15,547 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:15,548 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:15,549 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:15,549 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:15,550 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:15,551 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 08:33:15,567 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 33 tasks waiting for ancestors, 16/57 done 2023-05-09 08:33:15,571 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:15,572 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:15,573 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:15,582 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:15,583 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:15,583 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:15,584 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 08:33:15,584 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:15,692 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:15,692 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:15,698 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:15,709 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:15,709 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:15,711 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:15,714 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:15,715 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:15,715 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:15,717 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:15,718 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:15,719 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:15,723 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:15,724 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:15,724 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:15,725 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:15,725 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:15,726 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:15,726 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:15,732 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:15,733 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of so and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 08:33:15,733 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:15,737 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:15,739 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 08:33:15,739 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:15,753 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:15,793 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:15,794 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:15,819 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:15,820 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:15,820 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:15,821 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 08:33:15,821 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:15,859 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:15,863 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:15,863 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:15,864 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 08:33:15,864 UTC [2820945] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:15,880 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:15,881 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 08:33:15,899 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:15,902 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:15,902 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:15,903 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 08:33:15,903 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:15,920 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:15,920 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 08:33:15,938 UTC [2820945] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:15,939 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:15,939 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:15,940 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:15,941 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:15,941 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:15,941 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,941 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,960 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,960 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,960 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,974 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,974 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,974 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,974 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:15,975 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:15,976 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,976 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,976 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:15,977 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:15,977 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,977 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,985 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:15,985 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:15,989 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:15,992 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:15,994 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,994 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:15,994 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:15,995 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:15,999 UTC [2820945] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,005 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,006 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:16,006 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,004 UTC [2820945] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,006 UTC [2820945] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,008 UTC [2820945] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,013 UTC [2820945] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,016 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,016 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:16,015 UTC [2820945] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,016 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:16,017 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:16,018 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:16,018 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:16,019 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:16,021 UTC [2820946] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,021 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:16,022 UTC [2820946] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,022 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:16,023 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:16,023 UTC [2820946] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:16,023 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:16,023 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:16,023 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:16,024 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:16,024 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:16,025 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,025 UTC [2820945] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 08:33:16,025 UTC [2820945] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 08:33:16,025 UTC [2820945] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 08:33:16,026 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:16,030 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,034 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,036 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,039 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,043 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,045 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,046 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:16,047 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:16,048 UTC [2820946] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 08:33:16,048 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:16,049 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:16,052 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:16,053 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:16,054 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:16,055 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:16,055 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:16,056 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:16,056 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 08:33:16,057 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,057 UTC [2820946] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 08:33:16,057 UTC [2820946] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 08:33:16,057 UTC [2820946] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 08:33:16,267 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:16,267 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 08:33:16,278 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/so (priority 26) in 0:00:00.809687 2023-05-09 08:33:16,348 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:16,349 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:16,349 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:16,350 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 08:33:16,351 UTC [2820945] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:16,362 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:16,362 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 08:33:16,370 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:16,371 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:16,371 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:16,372 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 08:33:16,372 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:16,373 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/thetao (priority 1) in 0:00:07.193424 2023-05-09 08:33:16,383 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:16,383 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 08:33:16,394 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/so (priority 2) in 0:00:07.214026 2023-05-09 08:33:16,469 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 33 tasks waiting for ancestors, 17/57 done 2023-05-09 08:33:16,470 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/no3 in process [2820950] 2023-05-09 08:33:16,476 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:16,477 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:16,477 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:16,477 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:16,477 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:16,477 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:16,478 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:16,478 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:16,478 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,492 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,492 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:16,492 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,502 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,502 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:16,502 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,517 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:16,517 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:16,521 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:16,524 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:16,527 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:16,530 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,534 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,536 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,538 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:16,542 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,544 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:16,546 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:16,546 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:16,547 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:16,548 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:16,551 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:16,551 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:16,552 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:16,552 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:16,552 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:16,553 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:16,553 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:16,554 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,554 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:16,554 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:16,555 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:16,557 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 08:33:16,569 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 32 tasks waiting for ancestors, 19/57 done 2023-05-09 08:33:16,576 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/o2 in process [2820946] 2023-05-09 08:33:16,578 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:16,579 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:16,580 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,580 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries in process [2820945] 2023-05-09 08:33:16,582 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:16,582 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:16,582 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:16,583 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 08:33:16,583 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:16,583 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:16,583 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:16,584 UTC [2820945] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 08:33:16,584 UTC [2820945] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:16,584 UTC [2820945] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:16,584 UTC [2820945] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:16,584 UTC [2820945] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:16,584 UTC [2820945] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2023-05-09 08:33:16,585 UTC [2820945] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2023-05-09 08:33:16,588 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:16,589 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:16,589 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:16,590 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 08:33:16,591 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:16,594 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:16,594 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:16,596 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:16,598 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:16,600 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:16,600 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:16,601 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:16,601 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:16,602 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:16,605 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:16,606 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:16,606 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:16,607 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:16,607 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:16,609 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:16,609 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,613 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,614 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of o2 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:16,614 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,619 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,620 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 08:33:16,620 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:16,637 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,670 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 30 tasks waiting for ancestors, 19/57 done 2023-05-09 08:33:16,672 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:16,672 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 08:33:16,672 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:16,673 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:16,678 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:16,689 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:16,689 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:16,690 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:16,693 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:16,694 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:16,694 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:16,694 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:16,695 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:16,695 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:16,695 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:16,696 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:16,697 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:16,697 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 08:33:16,697 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:16,700 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:16,700 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:16,701 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:16,702 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:16,702 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:16,703 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:16,703 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,708 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,709 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of no3 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:16,709 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,714 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:16,715 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 08:33:16,715 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:16,731 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,793 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:16,794 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:16,813 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:16,814 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:16,814 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:16,865 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 08:33:16,865 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:16,992 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:16,992 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 08:33:16,998 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:16,998 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:16,998 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:16,998 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:16,999 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:16,999 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:16,999 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:16,999 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,011 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,011 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:17,011 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,025 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,025 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:17,025 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,040 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:17,040 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:17,043 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:17,046 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:17,049 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:17,052 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:17,052 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 08:33:17,052 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:17,056 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,059 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:17,062 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/no3 (priority 27) in 0:00:00.591795 2023-05-09 08:33:17,061 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:17,065 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,067 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:17,068 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:17,069 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:17,070 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:17,071 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:17,073 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:17,074 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:17,074 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:17,075 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:17,075 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:17,076 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:17,076 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:17,077 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,077 UTC [2820946] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:17,077 UTC [2820946] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:17,079 UTC [2820946] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,080 UTC [2820946] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 08:33:17,097 UTC [2820946] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:17,097 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:17,098 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,106 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:17,107 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:17,107 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:17,108 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 08:33:17,108 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:17,171 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 30 tasks waiting for ancestors, 20/57 done 2023-05-09 08:33:17,173 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/si in process [2820950] 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:17,179 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:17,180 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,190 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,190 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:17,192 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:17,194 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:17,196 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:17,196 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:17,196 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:17,197 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:17,198 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:17,201 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:17,202 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:17,202 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:17,203 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:17,203 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:17,204 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:17,204 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,206 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:17,206 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 08:33:17,209 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,209 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of si and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:17,209 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,214 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,215 UTC [2820950] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 08:33:17,215 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:17,216 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/o2 (priority 28) in 0:00:00.640510 2023-05-09 08:33:17,228 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,259 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:17,260 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,271 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 29 tasks waiting for ancestors, 20/57 done 2023-05-09 08:33:17,276 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:17,277 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:17,277 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:17,279 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 08:33:17,279 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:17,372 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 29 tasks waiting for ancestors, 21/57 done 2023-05-09 08:33:17,374 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/chl in process [2820946] 2023-05-09 08:33:17,376 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:17,377 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,398 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,398 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:17,399 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:17,402 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:17,403 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:17,403 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:17,404 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:17,405 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:17,406 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:17,408 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:17,409 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:17,410 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:17,410 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:17,411 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:17,412 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:17,412 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,416 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,417 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of chl and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:17,417 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,421 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,423 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 08:33:17,423 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:17,436 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,467 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:17,467 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 08:33:17,470 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:17,471 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,472 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:17,473 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:17,472 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 28 tasks waiting for ancestors, 21/57 done 2023-05-09 08:33:17,473 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:17,473 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:17,473 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:17,474 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:17,474 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:17,474 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,485 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,485 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:17,485 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,488 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:17,489 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:17,489 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:17,490 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 08:33:17,491 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:17,499 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,499 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:17,499 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,514 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:17,514 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:17,517 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:17,520 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:17,523 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:17,526 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:17,531 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,533 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:17,535 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:17,540 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,542 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:17,544 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:17,545 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:17,546 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:17,546 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:17,552 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:17,554 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:17,555 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:17,556 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:17,556 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:17,557 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:17,557 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:17,558 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,558 UTC [2820950] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:17,558 UTC [2820950] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:17,560 UTC [2820950] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:17,561 UTC [2820950] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 08:33:17,585 UTC [2820950] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:17,585 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:17,586 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:17,595 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:17,596 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:17,596 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:17,597 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 08:33:17,598 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:17,679 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:17,679 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 08:33:17,687 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:17,687 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 08:33:17,690 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/si (priority 29) in 0:00:00.517298 2023-05-09 08:33:17,695 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/chl (priority 31) in 0:00:00.321168 2023-05-09 08:33:17,873 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 28 tasks waiting for ancestors, 23/57 done 2023-05-09 08:33:17,880 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/dfe in process [2820946] 2023-05-09 08:33:17,883 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:17,883 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:17,883 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:17,884 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 08:33:17,884 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:17,884 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:17,884 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,884 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/Global_profile_vs_WOA in process [2820950] 2023-05-09 08:33:17,889 UTC [2820950] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA/settings.yml'] 2023-05-09 08:33:17,889 UTC [2820950] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:17,890 UTC [2820950] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 08:33:17,890 UTC [2820950] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 08:33:17,890 UTC [2820950] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 08:33:17,890 UTC [2820950] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA/log.txt 2023-05-09 08:33:17,890 UTC [2820950] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA/settings.yml 2023-05-09 08:33:17,935 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:17,935 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:17,938 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:17,941 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:17,943 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:17,943 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:17,944 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:17,945 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:17,946 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:17,950 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:17,951 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:17,951 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:17,952 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:17,952 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:17,954 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:17,954 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,960 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,961 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of dfe and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:17,961 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,968 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:17,970 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of dfe. 2023-05-09 08:33:17,970 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:17,974 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 26 tasks waiting for ancestors, 23/57 done 2023-05-09 08:33:17,988 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:18,080 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:18,081 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:18,108 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:18,110 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:18,110 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:18,112 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 08:33:18,112 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:18,336 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:18,336 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 08:33:18,348 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/dfe (priority 32) in 0:00:00.467865 2023-05-09 08:33:18,363 UTC [2820948] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.3 GB 2023-05-09 08:33:18,364 UTC [2820948] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:18,364 UTC [2820948] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 08:33:18,364 UTC [2820948] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diagnostic_provenance.yml 2023-05-09 08:33:18,393 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,393 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,393 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,393 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30814 2023-05-09 08:33:18,457 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,457 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,457 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,457 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30851 2023-05-09 08:33:18,466 UTC [2820952] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.3 GB 2023-05-09 08:33:18,467 UTC [2820952] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:18,468 UTC [2820952] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 08:33:18,468 UTC [2820952] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 08:33:18,475 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 26 tasks waiting for ancestors, 24/57 done 2023-05-09 08:33:18,476 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/talk in process [2820946] 2023-05-09 08:33:18,480 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 08:33:18,480 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:18,480 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:18,480 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 08:33:18,480 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:18,481 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:18,481 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:18,495 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:18,495 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:18,496 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,496 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,496 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,496 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28855 2023-05-09 08:33:18,497 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:18,501 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:18,503 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:18,503 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:18,504 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:18,505 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:18,506 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:18,509 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:18,510 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 08:33:18,511 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:18,512 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 08:33:18,512 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:18,514 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 08:33:18,514 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:18,519 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:18,520 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of talk and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 08:33:18,520 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,520 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,520 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:18,520 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,520 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27637 2023-05-09 08:33:18,526 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:18,527 UTC [2820946] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 08:33:18,528 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:18,542 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:18,562 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,562 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,562 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,562 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42006 2023-05-09 08:33:18,574 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 08:33:18,575 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:18,575 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 25 tasks waiting for ancestors, 24/57 done 2023-05-09 08:33:18,577 UTC [2820948] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,581 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,581 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,581 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,581 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30175 2023-05-09 08:33:18,592 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:18,593 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:18,593 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:18,594 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 08:33:18,595 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:18,615 UTC [2820948] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,620 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,620 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,620 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,620 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31115 2023-05-09 08:33:18,626 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,626 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,626 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,626 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28416 2023-05-09 08:33:18,654 UTC [2820948] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,659 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,659 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,659 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,659 UTC [2820948] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27740 2023-05-09 08:33:18,682 UTC [2820952] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_prep_global_Surface_average_timeseries_2D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,686 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,686 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,686 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,686 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41656 2023-05-09 08:33:18,693 UTC [2820948] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries took 0.3 seconds 2023-05-09 08:33:18,693 UTC [2820948] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries (priority 6) in 0:00:07.397063 2023-05-09 08:33:18,721 UTC [2820952] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,725 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,725 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,725 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,725 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27455 2023-05-09 08:33:18,760 UTC [2820952] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:18,765 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:18,765 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:18,765 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:18,765 UTC [2820952] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28636 2023-05-09 08:33:18,777 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:18,777 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 08:33:18,785 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/talk (priority 33) in 0:00:00.309169 2023-05-09 08:33:18,799 UTC [2820952] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries took 0.3 seconds 2023-05-09 08:33:18,799 UTC [2820952] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries (priority 10) in 0:00:06.391816 2023-05-09 08:33:18,876 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 25 tasks waiting for ancestors, 25/57 done 2023-05-09 08:33:18,878 UTC [2820948] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/thetao in process [2820948] 2023-05-09 08:33:18,887 UTC [2820948] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 08:33:18,887 UTC [2820948] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:18,887 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:18,887 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 08:33:18,887 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:18,888 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:18,888 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:18,901 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:18,901 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:18,902 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:18,906 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:18,907 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:18,907 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:18,908 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:18,909 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:18,910 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:18,913 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:18,913 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:18,914 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:18,914 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:18,915 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:18,915 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:18,915 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:18,916 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:18,976 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 24 tasks waiting for ancestors, 27/57 done 2023-05-09 08:33:18,981 UTC [2820952] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/so in process [2820952] 2023-05-09 08:33:18,983 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/Global_profile_no_obs in process [2820946] 2023-05-09 08:33:18,986 UTC [2820946] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs/settings.yml'] 2023-05-09 08:33:18,986 UTC [2820946] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:18,986 UTC [2820946] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:18,986 UTC [2820946] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:18,986 UTC [2820946] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:18,986 UTC [2820946] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs/log.txt 2023-05-09 08:33:18,987 UTC [2820946] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs/settings.yml 2023-05-09 08:33:18,987 UTC [2820952] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 08:33:18,987 UTC [2820952] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:18,988 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:18,988 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:18,988 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:18,989 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:18,989 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:18,989 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:18,989 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,004 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,004 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:19,004 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,015 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,015 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:19,015 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,025 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,025 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:19,029 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:19,030 UTC [2820952] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,031 UTC [2820952] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,032 UTC [2820952] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:19,032 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:19,035 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:19,039 UTC [2820952] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:19,043 UTC [2820952] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:19,046 UTC [2820952] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:19,048 UTC [2820952] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:19,052 UTC [2820952] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:19,054 UTC [2820952] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:19,055 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:19,056 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:19,057 UTC [2820952] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 08:33:19,057 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:19,058 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:19,061 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:19,062 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:19,063 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:19,064 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:19,064 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:19,065 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:19,065 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:19,066 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:19,070 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:19,071 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:19,077 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:19,077 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 22 tasks waiting for ancestors, 27/57 done 2023-05-09 08:33:19,078 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:19,080 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:19,082 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:19,082 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:19,084 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 08:33:19,084 UTC [2820952] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:19,204 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:19,205 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:19,211 UTC [2820952] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:19,223 UTC [2820952] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:19,223 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:19,225 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:19,228 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:19,229 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:19,229 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:19,230 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:19,231 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:19,232 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:19,235 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:19,236 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:19,236 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:19,237 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:19,237 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:19,238 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:19,238 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:19,239 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:23,941 UTC [2820950] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 08:33:23,942 UTC [2820950] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:23,943 UTC [2820950] DEBUG esmvalcore._task:590 Script ocean/diagnostic_profiles.py completed successfully 2023-05-09 08:33:23,943 UTC [2820950] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_vs_WOA/Global_profile_vs_WOA/diagnostic_provenance.yml 2023-05-09 08:33:23,975 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:23,975 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:23,975 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:23,975 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37414 2023-05-09 08:33:24,025 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,025 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,025 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,025 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41236 2023-05-09 08:33:24,034 UTC [2820946] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 08:33:24,035 UTC [2820946] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:24,035 UTC [2820946] DEBUG esmvalcore._task:590 Script ocean/diagnostic_profiles.py completed successfully 2023-05-09 08:33:24,035 UTC [2820946] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_profile_no_obs/Global_profile_no_obs/diagnostic_provenance.yml 2023-05-09 08:33:24,044 UTC [2820946] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:24,055 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,055 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,055 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,055 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37262 2023-05-09 08:33:24,091 UTC [2820946] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:24,098 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,098 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,098 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,098 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 35309 2023-05-09 08:33:24,133 UTC [2820946] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 08:33:24,140 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,140 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,140 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,140 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37319 2023-05-09 08:33:24,175 UTC [2820946] WARNING esmvalcore._task:680 Valid ancestor files for diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs are: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 08:33:24,176 UTC [2820946] DEBUG esmvalcore._task:684 Collecting provenance of task diag_profile_no_obs/Global_profile_no_obs took 0.1 seconds 2023-05-09 08:33:24,176 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/Global_profile_no_obs (priority 30) in 0:00:05.192365 2023-05-09 08:33:24,207 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,207 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,208 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,208 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41587 2023-05-09 08:33:24,258 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,258 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,258 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,258 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 50077 2023-05-09 08:33:24,283 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 22 tasks waiting for ancestors, 28/57 done 2023-05-09 08:33:24,284 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/no3 in process [2820946] 2023-05-09 08:33:24,290 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 08:33:24,290 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:24,290 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:24,291 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 08:33:24,291 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:24,291 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:24,291 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:24,308 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:24,308 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:24,309 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,309 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,309 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,309 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 43262 2023-05-09 08:33:24,310 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:24,313 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:24,314 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:24,314 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:24,315 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:24,316 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:24,317 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:24,319 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:24,320 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:24,320 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:24,321 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:24,321 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:24,322 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:24,322 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:24,323 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:24,346 UTC [2820950] DEBUG esmvalcore._task:684 Collecting provenance of task diag_profile_vs_WOA/Global_profile_vs_WOA took 0.4 seconds 2023-05-09 08:33:24,346 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/Global_profile_vs_WOA (priority 24) in 0:00:06.461267 2023-05-09 08:33:24,383 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 21 tasks waiting for ancestors, 28/57 done 2023-05-09 08:33:24,483 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 21 tasks waiting for ancestors, 29/57 done 2023-05-09 08:33:24,485 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/si in process [2820950] 2023-05-09 08:33:24,492 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 08:33:24,492 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:24,492 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:24,492 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:24,493 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:24,493 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:24,493 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:24,493 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:24,493 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,511 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,511 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:24,511 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,521 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,521 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:24,521 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,532 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:24,532 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:24,536 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:24,539 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:24,542 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:24,545 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:24,550 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:24,552 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:24,554 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:24,559 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:24,561 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:24,562 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:24,563 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:24,564 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:24,564 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:24,567 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:24,568 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:24,568 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:24,569 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:24,569 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:24,570 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:24,570 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:24,571 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:24,574 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:24,574 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:24,579 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:24,580 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:24,581 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:24,583 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:24,583 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:24,584 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 20 tasks waiting for ancestors, 29/57 done 2023-05-09 08:33:24,585 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 08:33:24,586 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:24,631 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:24,631 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 08:33:24,637 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:24,637 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:24,638 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 08:33:24,638 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:24,638 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:24,638 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:24,645 UTC [2820945] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 08:33:24,646 UTC [2820945] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:24,646 UTC [2820945] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 08:33:24,647 UTC [2820945] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 08:33:24,649 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:24,649 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:24,651 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:24,654 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:24,655 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:24,655 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:24,656 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:24,657 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:24,657 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:24,660 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:24,661 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:24,662 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:24,663 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:24,663 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:24,664 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:24,664 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:24,664 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:24,706 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,706 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,707 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,707 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 22113 2023-05-09 08:33:24,771 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,771 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,771 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,771 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 23110 2023-05-09 08:33:24,834 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,834 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,834 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,834 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18944 2023-05-09 08:33:24,896 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,896 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,896 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,896 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15093 2023-05-09 08:33:24,956 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:24,956 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:24,956 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:24,956 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 22936 2023-05-09 08:33:25,005 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,009 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,010 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,010 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,010 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37587 2023-05-09 08:33:25,044 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,048 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,049 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,049 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,049 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42158 2023-05-09 08:33:25,070 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,071 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,084 UTC [2820946] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:25,084 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:25,084 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,085 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:25,088 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,088 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,088 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,088 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31936 2023-05-09 08:33:25,089 UTC [2820947] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 08:33:25,090 UTC [2820947] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:25,091 UTC [2820947] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 08:33:25,091 UTC [2820947] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_scalars/Scalar_timeseries/diagnostic_provenance.yml 2023-05-09 08:33:25,096 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,098 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:25,098 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,100 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 08:33:25,100 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:25,113 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,114 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 08:33:25,118 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:25,118 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,119 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:25,119 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:25,119 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:25,119 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,120 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,120 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,123 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,128 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,128 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,128 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,128 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30622 2023-05-09 08:33:25,130 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,131 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,131 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,141 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,141 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,141 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,151 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:25,151 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,155 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:25,158 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,161 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:25,163 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,164 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:25,167 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,167 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,167 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,167 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 32180 2023-05-09 08:33:25,168 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:25,171 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:25,173 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,173 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,173 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,173 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27400 2023-05-09 08:33:25,172 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:25,177 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:25,179 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:25,180 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,181 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:25,182 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,183 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:25,185 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,186 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:25,186 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,187 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:25,187 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,188 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,188 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:25,189 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:25,192 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,193 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,197 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:25,198 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:25,199 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,200 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:25,201 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,202 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_so_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,203 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 08:33:25,203 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:25,206 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,207 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,207 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,207 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 14302 2023-05-09 08:33:25,236 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,236 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,236 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,236 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27757 2023-05-09 08:33:25,236 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_thetao_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,240 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,240 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 08:33:25,242 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,242 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,242 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,242 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18713 2023-05-09 08:33:25,252 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/no3 (priority 38) in 0:00:00.967812 2023-05-09 08:33:25,272 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_no3_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,277 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,277 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,277 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,277 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 17862 2023-05-09 08:33:25,296 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,296 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,296 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,296 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28810 2023-05-09 08:33:25,307 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_o2_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,312 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,312 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,312 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,312 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19912 2023-05-09 08:33:25,342 UTC [2820945] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_si_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:25,347 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,347 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,347 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,347 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15924 2023-05-09 08:33:25,357 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,357 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,357 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,357 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27443 2023-05-09 08:33:25,376 UTC [2820945] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries took 0.7 seconds 2023-05-09 08:33:25,376 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries (priority 0) in 0:00:08.795692 2023-05-09 08:33:25,390 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 20 tasks waiting for ancestors, 30/57 done 2023-05-09 08:33:25,391 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/o2 in process [2820946] 2023-05-09 08:33:25,398 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 08:33:25,398 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:25,398 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,398 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:25,398 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:25,399 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:25,399 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,399 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,399 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,402 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,403 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,411 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,411 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,411 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,416 UTC [2820950] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:25,416 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:25,417 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,417 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,417 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,417 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27934 2023-05-09 08:33:25,417 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:25,422 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,422 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:25,422 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,429 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,430 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:25,430 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,432 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 08:33:25,433 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:25,433 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,432 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:25,436 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:25,439 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,442 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:25,443 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,443 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 08:33:25,445 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:25,449 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:25,451 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:25,453 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/si (priority 39) in 0:00:00.967473 2023-05-09 08:33:25,453 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:25,458 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:25,460 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:25,461 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,462 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:25,463 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,463 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:25,466 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,467 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:25,467 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,468 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:25,468 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,469 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,469 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:25,469 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:25,473 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,473 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,477 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:25,478 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,478 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,478 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,478 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27809 2023-05-09 08:33:25,479 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:25,480 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,481 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:25,481 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,484 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 08:33:25,484 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:25,491 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 19 tasks waiting for ancestors, 31/57 done 2023-05-09 08:33:25,492 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/areacello in process [2820945] 2023-05-09 08:33:25,495 UTC [2820945] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 08:33:25,495 UTC [2820945] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:25,495 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,495 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 08:33:25,495 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,496 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 08:33:25,496 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:25,502 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:25,502 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,503 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:25,504 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,504 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:25,504 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,505 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:25,505 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,506 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:25,506 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,507 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:25,507 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,507 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,507 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,508 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:25,508 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,509 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 08:33:25,509 UTC [2820945] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:25,520 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,520 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 08:33:25,522 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,522 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 08:33:25,525 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:25,526 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,526 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 08:33:25,526 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,526 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:25,526 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:25,529 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/areacello (priority 41) in 0:00:00.036942 2023-05-09 08:33:25,538 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,538 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,538 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,538 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28247 2023-05-09 08:33:25,540 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:25,540 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,542 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:25,544 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,546 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:25,546 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,547 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:25,548 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,548 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:25,551 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,552 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:25,552 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,553 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:25,553 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,554 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,554 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:25,555 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:25,591 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 18 tasks waiting for ancestors, 32/57 done 2023-05-09 08:33:25,592 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/intpp in process [2820950] 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed' 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:25,595 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:25,599 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,599 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,599 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,599 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28059 2023-05-09 08:33:25,609 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:25,609 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,611 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 08:33:25,623 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,624 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:25,624 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,625 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 08:33:25,627 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,627 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:25,632 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,633 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 08:33:25,633 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,633 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 08:33:25,634 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,634 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,634 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,635 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,639 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,640 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:25,640 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,642 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc' 2023-05-09 08:33:25,642 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 08:33:25,659 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,659 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,659 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,659 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27391 2023-05-09 08:33:25,691 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 17 tasks waiting for ancestors, 33/57 done 2023-05-09 08:33:25,693 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/fgco2 in process [2820945] 2023-05-09 08:33:25,695 UTC [2820945] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 08:33:25,695 UTC [2820945] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 08:33:25,695 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,696 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed' 2023-05-09 08:33:25,696 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,696 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:25,696 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:25,701 UTC [2820945] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/iris/fileformats/_nc_load_rules/helpers.py:223: UnknownCellMethodWarning: NetCDF variable 'fgco2' contains unknown cell method 'where' 2023-05-09 08:33:25,710 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:25,710 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,712 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', check_level = 2023-05-09 08:33:25,719 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,719 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,719 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,719 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 26827 2023-05-09 08:33:25,724 UTC [2820945] WARNING esmvalcore.cmor.check:261 There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 08:33:25,724 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,725 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:25,725 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,726 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'fgco2', frequency = 'mon', check_level = 2023-05-09 08:33:25,728 UTC [2820945] WARNING esmvalcore.cmor.check:261 There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file 2023-05-09 08:33:25,728 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,729 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:25,733 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,734 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', check_level = 2023-05-09 08:33:25,734 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,735 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'fgco2', frequency = 'mon', check_level = 2023-05-09 08:33:25,735 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,736 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,736 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:25,736 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:25,740 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:25,741 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 08:33:25,742 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:25,743 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc' 2023-05-09 08:33:25,749 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,750 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed'] 2023-05-09 08:33:25,757 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/intpp (priority 43) in 0:00:00.164547 2023-05-09 08:33:25,780 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,780 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,780 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,780 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29394 2023-05-09 08:33:25,792 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 16 tasks waiting for ancestors, 33/57 done 2023-05-09 08:33:25,840 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,840 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,841 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,841 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29592 2023-05-09 08:33:25,858 UTC [2820945] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 08:33:25,892 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 16 tasks waiting for ancestors, 34/57 done 2023-05-09 08:33:25,894 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/chl in process [2820950] 2023-05-09 08:33:25,897 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 08:33:25,897 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:25,898 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:25,898 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 08:33:25,898 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:25,898 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:25,898 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:25,901 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,901 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,901 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,901 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28907 2023-05-09 08:33:25,927 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:25,927 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:25,930 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:25,934 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:25,936 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:25,936 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:25,937 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:25,939 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:25,940 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:25,944 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:25,946 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:25,946 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:25,947 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:25,948 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:25,949 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:25,949 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:25,950 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:25,961 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:25,961 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:25,961 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:25,962 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29186 2023-05-09 08:33:25,982 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:25,983 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed'] 2023-05-09 08:33:25,990 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/fgco2 (priority 44) in 0:00:00.297398 2023-05-09 08:33:25,993 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 15 tasks waiting for ancestors, 34/57 done 2023-05-09 08:33:26,022 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,022 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,022 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,022 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29589 2023-05-09 08:33:26,078 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,082 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,082 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,082 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,082 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28841 2023-05-09 08:33:26,093 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 15 tasks waiting for ancestors, 35/57 done 2023-05-09 08:33:26,096 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/dfe in process [2820945] 2023-05-09 08:33:26,098 UTC [2820945] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 08:33:26,098 UTC [2820945] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:26,098 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:26,099 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 08:33:26,099 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:26,099 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:26,099 UTC [2820945] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:26,114 UTC [2820945] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:26,114 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:26,115 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:26,116 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_1.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,118 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:26,119 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:26,120 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:26,120 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:26,120 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,121 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,121 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,121 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28354 2023-05-09 08:33:26,121 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:26,122 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:26,125 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:26,126 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:26,126 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:26,127 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:26,127 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:26,128 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:26,128 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:26,129 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:26,154 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_10.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,158 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,158 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,158 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,158 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27827 2023-05-09 08:33:26,192 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_11.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,194 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 14 tasks waiting for ancestors, 35/57 done 2023-05-09 08:33:26,196 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,196 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,196 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,196 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29955 2023-05-09 08:33:26,230 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_12.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,234 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,234 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,234 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,234 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30589 2023-05-09 08:33:26,252 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:26,253 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:26,265 UTC [2820946] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:26,265 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:26,267 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:26,268 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_13.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,273 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,274 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,274 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,274 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29744 2023-05-09 08:33:26,277 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,278 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:26,278 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,280 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 08:33:26,280 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:26,292 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:26,292 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 08:33:26,302 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/o2 (priority 40) in 0:00:00.910083 2023-05-09 08:33:26,308 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_14.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,312 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,312 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,312 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,312 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30250 2023-05-09 08:33:26,346 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_2.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,351 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,351 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,351 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,351 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29852 2023-05-09 08:33:26,385 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_3.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,389 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,389 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,389 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,389 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28141 2023-05-09 08:33:26,423 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_4.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,427 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,427 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,427 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,427 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28823 2023-05-09 08:33:26,461 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_5.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,465 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,465 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,465 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,465 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28834 2023-05-09 08:33:26,494 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 14 tasks waiting for ancestors, 36/57 done 2023-05-09 08:33:26,496 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/areacello in process [2820946] 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 08:33:26,499 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:26,500 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_6.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,505 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,505 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,505 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,505 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30340 2023-05-09 08:33:26,505 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 08:33:26,505 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:26,506 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:26,506 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:26,507 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:26,507 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:26,508 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:26,508 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:26,509 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 08:33:26,509 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:26,509 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 08:33:26,510 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:26,510 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:26,510 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,511 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 08:33:26,511 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,511 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 08:33:26,512 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 08:33:26,522 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:26,522 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 08:33:26,529 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/areacello (priority 47) in 0:00:00.032717 2023-05-09 08:33:26,539 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_7.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,543 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,543 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,543 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,544 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 29636 2023-05-09 08:33:26,578 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_8.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,582 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,582 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,582 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,582 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28811 2023-05-09 08:33:26,595 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 13 tasks waiting for ancestors, 36/57 done 2023-05-09 08:33:26,617 UTC [2820947] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_9.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 08:33:26,621 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:26,621 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:26,621 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:26,621 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27957 2023-05-09 08:33:26,655 UTC [2820947] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_scalars/Scalar_timeseries took 1.6 seconds 2023-05-09 08:33:26,655 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_scalars/Scalar_timeseries (priority 22) in 0:00:12.628918 2023-05-09 08:33:26,685 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:26,686 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:26,695 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 13 tasks waiting for ancestors, 37/57 done 2023-05-09 08:33:26,697 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/thetao in process [2820946] 2023-05-09 08:33:26,702 UTC [2820950] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:26,703 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,704 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:26,704 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:26,704 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:26,704 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 08:33:26,704 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:26,704 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:26,705 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,705 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:26,705 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:26,707 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 08:33:26,708 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:26,716 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:26,716 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:26,718 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:26,721 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:26,722 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:26,722 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:26,723 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:26,723 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:26,723 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 08:33:26,724 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:26,725 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:26,728 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:26,728 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 08:33:26,729 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:26,729 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:26,730 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:26,730 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:26,730 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:26,731 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:26,734 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/chl (priority 45) in 0:00:00.839859 2023-05-09 08:33:26,736 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:26,737 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:26,743 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:26,744 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:26,749 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:26,750 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:26,753 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,754 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:26,754 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,757 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 08:33:26,757 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:26,796 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 12 tasks waiting for ancestors, 38/57 done 2023-05-09 08:33:26,798 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/so in process [2820947] 2023-05-09 08:33:26,808 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:26,808 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:26,808 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:26,809 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 08:33:26,809 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:26,809 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 08:33:26,809 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:26,823 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 08:33:26,823 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:26,825 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:26,828 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:26,830 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:26,830 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:26,831 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:26,832 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:26,832 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:26,836 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:26,837 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 08:33:26,837 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:26,838 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:26,838 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:26,839 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:26,839 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:26,840 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:26,845 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:26,847 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:26,855 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:26,856 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:26,861 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:26,862 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:26,864 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,865 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:26,865 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,866 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 08:33:26,867 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:26,897 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 11 tasks waiting for ancestors, 39/57 done 2023-05-09 08:33:26,900 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/no3 in process [2820950] 2023-05-09 08:33:26,902 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:26,904 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:26,906 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:26,906 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:26,906 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:26,906 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:26,907 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:26,907 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 08:33:26,907 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:26,907 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:26,907 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,918 UTC [2820945] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:26,918 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:26,921 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:26,921 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:26,923 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 08:33:26,923 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,923 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:26,923 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,923 UTC [2820945] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:26,942 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,942 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:26,942 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,943 UTC [2820945] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:26,943 UTC [2820945] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 08:33:26,957 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/dfe (priority 46) in 0:00:00.860527 2023-05-09 08:33:26,962 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 08:33:26,963 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:26,966 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:26,971 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:26,974 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:26,978 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:26,985 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:26,987 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:26,990 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:26,997 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 10 tasks waiting for ancestors, 39/57 done 2023-05-09 08:33:26,996 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:26,999 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:27,001 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:27,002 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:27,003 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:27,004 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:27,008 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:27,009 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 08:33:27,009 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:27,010 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:27,011 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:27,012 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:27,012 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:27,013 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:27,019 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:27,022 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:27,030 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:27,032 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:27,036 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:27,038 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:27,041 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:27,042 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:27,042 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:27,045 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 08:33:27,045 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 08:33:27,097 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 10 tasks waiting for ancestors, 40/57 done 2023-05-09 08:33:27,110 UTC [2820945] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/Global_Ocean_surface_map in process [2820945] 2023-05-09 08:33:27,114 UTC [2820945] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml'] 2023-05-09 08:33:27,115 UTC [2820945] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:27,115 UTC [2820945] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 08:33:27,115 UTC [2820945] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 08:33:27,115 UTC [2820945] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 08:33:27,115 UTC [2820945] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map/log.txt 2023-05-09 08:33:27,115 UTC [2820945] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml 2023-05-09 08:33:27,198 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 9 tasks waiting for ancestors, 40/57 done 2023-05-09 08:33:27,706 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:27,706 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 08:33:27,712 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:27,712 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:27,713 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 08:33:27,713 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:27,713 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:27,713 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:27,726 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:27,726 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:27,728 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:27,731 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:27,732 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:27,732 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:27,733 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:27,734 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:27,735 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:27,738 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:27,739 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 08:33:27,739 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:27,740 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 08:33:27,740 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:27,741 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:27,741 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:27,741 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:27,746 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:27,747 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:27,754 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:27,755 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:27,759 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:27,760 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:27,762 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:27,763 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:27,763 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:27,765 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 08:33:27,765 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 08:33:27,939 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:27,940 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 08:33:27,945 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:27,945 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:27,946 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:27,946 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:27,947 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:27,947 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:27,947 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:27,947 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,965 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,965 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:27,966 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,976 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,976 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:27,976 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,987 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:27,987 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:27,991 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:27,994 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:27,997 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:27,999 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,004 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,006 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,008 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,012 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,015 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,016 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:28,016 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:28,017 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:28,018 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:28,021 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:28,022 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:28,022 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:28,023 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:28,023 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:28,023 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:28,023 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:28,024 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:28,028 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:28,030 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:28,036 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:28,037 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:28,041 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:28,042 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:28,044 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:28,045 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,046 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:28,048 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 08:33:28,048 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:28,176 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:28,176 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 08:33:28,186 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/no3 (priority 51) in 0:00:01.286564 2023-05-09 08:33:28,300 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 9 tasks waiting for ancestors, 41/57 done 2023-05-09 08:33:28,301 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/si in process [2820950] 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:28,308 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:28,312 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:28,312 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 08:33:28,318 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:28,318 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:28,318 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:28,318 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:28,319 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 08:33:28,319 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:28,319 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,319 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,322 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:28,322 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:28,324 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:28,326 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:28,328 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:28,328 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:28,329 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:28,329 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:28,330 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:28,331 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,331 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,331 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,333 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:28,334 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 08:33:28,334 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:28,335 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:28,335 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:28,336 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:28,336 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:28,337 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:28,341 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:28,342 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:28,342 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,342 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,342 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,348 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:28,349 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:28,353 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,353 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:28,353 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:28,354 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:28,356 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:28,356 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:28,357 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:28,357 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:28,357 UTC [2820947] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,358 UTC [2820947] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,359 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 08:33:28,359 UTC [2820947] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 08:33:28,359 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:28,360 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 08:33:28,363 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,365 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,370 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,372 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,374 UTC [2820947] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,378 UTC [2820947] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,380 UTC [2820947] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,382 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:28,382 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:28,383 UTC [2820947] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 08:33:28,383 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:28,384 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:28,387 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:28,387 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 08:33:28,389 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:28,389 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 08:33:28,389 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:28,390 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:28,390 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:28,391 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:28,395 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:28,396 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:28,400 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 8 tasks waiting for ancestors, 41/57 done 2023-05-09 08:33:28,403 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:28,404 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:28,408 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:28,409 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:28,411 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:28,412 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,412 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:28,413 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 08:33:28,414 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 08:33:28,633 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:28,634 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 08:33:28,649 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/thetao (priority 49) in 0:00:01.951239 2023-05-09 08:33:28,762 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:28,763 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 08:33:28,768 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:28,768 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:28,768 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:28,769 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:28,769 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 08:33:28,769 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:28,769 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,769 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,781 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,782 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,782 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,792 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,792 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,792 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,801 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 8 tasks waiting for ancestors, 42/57 done 2023-05-09 08:33:28,802 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/o2 in process [2820946] 2023-05-09 08:33:28,804 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 08:33:28,805 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:28,808 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:28,809 UTC [2820946] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:28,809 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:28,809 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:28,809 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:28,810 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:28,810 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 08:33:28,810 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:28,810 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,810 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,811 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:28,814 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,817 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,823 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,823 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,823 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,821 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,823 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,825 UTC [2820950] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,830 UTC [2820950] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,832 UTC [2820950] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,833 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:28,834 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:28,834 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,834 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:28,834 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,835 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:28,835 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:28,838 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:28,839 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 08:33:28,839 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:28,840 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 08:33:28,840 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:28,841 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:28,841 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:28,841 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:28,845 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 08:33:28,845 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:28,846 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:28,847 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:28,848 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:28,851 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:28,853 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:28,854 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,854 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:28,858 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:28,857 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,859 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:28,861 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:28,863 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,863 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:28,861 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,864 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,865 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 08:33:28,865 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 08:33:28,865 UTC [2820946] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:28,870 UTC [2820946] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:28,872 UTC [2820946] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:28,873 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:28,874 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:28,875 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:28,875 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:28,878 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:28,879 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 08:33:28,879 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:28,880 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:28,880 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:28,881 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:28,881 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:28,881 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:28,886 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:28,887 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:28,893 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:28,895 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:28,898 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:28,900 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:28,901 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 7 tasks waiting for ancestors, 42/57 done 2023-05-09 08:33:28,902 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:28,903 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:28,903 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:28,905 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 08:33:28,906 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 08:33:29,008 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:29,009 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 08:33:29,020 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/so (priority 50) in 0:00:02.220965 2023-05-09 08:33:29,202 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 7 tasks waiting for ancestors, 43/57 done 2023-05-09 08:33:29,203 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_transect_no_data/chl in process [2820947] 2023-05-09 08:33:29,206 UTC [2820947] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:29,206 UTC [2820947] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:29,206 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:29,207 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 08:33:29,207 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:29,207 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:29,207 UTC [2820947] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,229 UTC [2820947] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,230 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:29,232 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:29,235 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:29,237 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,237 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:29,238 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:29,239 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:29,240 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:29,244 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:29,245 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 08:33:29,245 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:29,246 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 08:33:29,246 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:29,247 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:29,247 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:29,248 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:29,254 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:29,255 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:29,263 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:29,265 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:29,269 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:29,271 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:29,273 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:29,275 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,275 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:29,277 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 08:33:29,278 UTC [2820947] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 08:33:29,302 UTC [2820777] INFO esmvalcore._task:779 Progress: 8 tasks running, 6 tasks waiting for ancestors, 43/57 done 2023-05-09 08:33:29,430 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:29,430 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 08:33:29,440 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/si (priority 52) in 0:00:01.138280 2023-05-09 08:33:29,462 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:29,463 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 08:33:29,468 UTC [2820946] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:29,469 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:29,469 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 08:33:29,469 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:29,469 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:29,469 UTC [2820946] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,480 UTC [2820946] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,480 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:29,482 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:29,485 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:29,486 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,486 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:29,487 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:29,488 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:29,489 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:29,491 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:29,492 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 08:33:29,493 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:29,493 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 08:33:29,494 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:29,494 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:29,494 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:29,495 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:29,499 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:29,501 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:29,507 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:29,508 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:29,512 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:29,513 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:29,515 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:29,516 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,516 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:29,518 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 08:33:29,518 UTC [2820946] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 08:33:29,675 UTC [2820947] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:29,675 UTC [2820947] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 08:33:29,683 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/chl (priority 55) in 0:00:00.479591 2023-05-09 08:33:29,761 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 6 tasks waiting for ancestors, 44/57 done 2023-05-09 08:33:29,762 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_transect_no_data/dfe in process [2820950] 2023-05-09 08:33:29,765 UTC [2820950] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 08:33:29,765 UTC [2820950] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:29,765 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:29,765 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 08:33:29,766 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:29,766 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 08:33:29,766 UTC [2820950] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,788 UTC [2820950] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 08:33:29,788 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:29,790 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:29,793 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:29,794 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,794 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:29,795 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:29,796 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:29,796 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 08:33:29,799 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:29,800 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 08:33:29,800 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:29,801 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 08:33:29,801 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:29,802 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:29,802 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:33:29,803 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:29,807 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 08:33:29,808 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 08:33:29,814 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:33:29,815 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:33:29,819 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 08:33:29,820 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 08:33:29,822 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:29,823 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 08:33:29,823 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:29,825 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 08:33:29,826 UTC [2820950] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 08:33:29,861 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 5 tasks waiting for ancestors, 45/57 done 2023-05-09 08:33:29,921 UTC [2820946] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:29,922 UTC [2820946] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 08:33:29,932 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/o2 (priority 53) in 0:00:01.129814 2023-05-09 08:33:30,062 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 5 tasks waiting for ancestors, 46/57 done 2023-05-09 08:33:30,075 UTC [2820947] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/Transects_vs_WOA in process [2820947] 2023-05-09 08:33:30,079 UTC [2820947] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA/settings.yml'] 2023-05-09 08:33:30,079 UTC [2820947] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:30,079 UTC [2820947] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 08:33:30,079 UTC [2820947] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 08:33:30,079 UTC [2820947] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 08:33:30,079 UTC [2820947] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA/log.txt 2023-05-09 08:33:30,079 UTC [2820947] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA/settings.yml 2023-05-09 08:33:30,163 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 4 tasks waiting for ancestors, 46/57 done 2023-05-09 08:33:30,274 UTC [2820950] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:30,275 UTC [2820950] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 08:33:30,285 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/dfe (priority 56) in 0:00:00.522098 2023-05-09 08:33:30,464 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 4 tasks waiting for ancestors, 47/57 done 2023-05-09 08:33:30,469 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_transect_no_data/Transects_no_data in process [2820946] 2023-05-09 08:33:30,472 UTC [2820946] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data/settings.yml'] 2023-05-09 08:33:30,472 UTC [2820946] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:30,472 UTC [2820946] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data 2023-05-09 08:33:30,472 UTC [2820946] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_transect_no_data/Transects_no_data 2023-05-09 08:33:30,472 UTC [2820946] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_transect_no_data/Transects_no_data 2023-05-09 08:33:30,472 UTC [2820946] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data/log.txt 2023-05-09 08:33:30,472 UTC [2820946] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data/settings.yml 2023-05-09 08:33:30,564 UTC [2820777] INFO esmvalcore._task:779 Progress: 7 tasks running, 3 tasks waiting for ancestors, 47/57 done 2023-05-09 08:33:35,517 UTC [2820946] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.4 GB 2023-05-09 08:33:35,518 UTC [2820946] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:35,518 UTC [2820946] DEBUG esmvalcore._task:590 Script ocean/diagnostic_transects.py completed successfully 2023-05-09 08:33:35,518 UTC [2820946] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_no_data/Transects_no_data/diagnostic_provenance.yml 2023-05-09 08:33:35,531 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:35,531 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:35,532 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:35,532 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 55742 2023-05-09 08:33:35,576 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:35,576 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:35,576 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:35,576 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 46941 2023-05-09 08:33:35,612 UTC [2820946] DEBUG esmvalcore._task:684 Collecting provenance of task diag_transect_no_data/Transects_no_data took 0.1 seconds 2023-05-09 08:33:35,613 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/Transects_no_data (priority 54) in 0:00:05.143657 2023-05-09 08:33:35,771 UTC [2820777] INFO esmvalcore._task:779 Progress: 6 tasks running, 3 tasks waiting for ancestors, 48/57 done 2023-05-09 08:33:45,131 UTC [2820949] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 08:33:45,132 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:45,147 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:45,242 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:45,244 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:45,244 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:45,245 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 08:33:45,245 UTC [2820949] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:33:45,259 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:45,259 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 08:33:45,264 UTC [2820949] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:45,264 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:33:45,264 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:45,265 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:45,265 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:33:45,265 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:33:45,266 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:45,266 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,280 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,280 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:45,280 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,290 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,291 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:33:45,291 UTC [2820949] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,301 UTC [2820949] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:33:45,301 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:33:45,304 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:45,308 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:33:45,311 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:45,314 UTC [2820949] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:45,318 UTC [2820949] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:45,320 UTC [2820949] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:45,322 UTC [2820949] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:33:45,327 UTC [2820949] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:45,329 UTC [2820949] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:33:45,330 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:33:45,331 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:45,332 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:33:45,332 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:33:45,335 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:33:45,336 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:33:45,336 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:33:45,337 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:33:45,337 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:33:45,338 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:33:45,338 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:33:45,338 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:33:45,342 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:45,342 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:45,343 UTC [2820949] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_potential_temperature / (K) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 08:33:45,343 UTC [2820949] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 08:33:45,345 UTC [2820949] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_potential_temperature / (K) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:33:45,346 UTC [2820949] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 08:33:45,355 UTC [2820949] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:33:45,356 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:45,356 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:33:45,357 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:45,357 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 08:33:45,357 UTC [2820949] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:33:45,392 UTC [2820949] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:45,393 UTC [2820949] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 08:33:45,403 UTC [2820949] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/thetao (priority 16) in 0:00:33.916534 2023-05-09 08:33:45,581 UTC [2820777] INFO esmvalcore._task:779 Progress: 5 tasks running, 3 tasks waiting for ancestors, 49/57 done 2023-05-09 08:33:48,162 UTC [2820947] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.6 GB 2023-05-09 08:33:48,162 UTC [2820947] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:48,162 UTC [2820947] DEBUG esmvalcore._task:590 Script ocean/diagnostic_transects.py completed successfully 2023-05-09 08:33:48,163 UTC [2820947] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_transect_vs_WOA/Transects_vs_WOA/diagnostic_provenance.yml 2023-05-09 08:33:48,246 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,246 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,246 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,246 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,386 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,386 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,386 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,386 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,467 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,467 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,467 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,468 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 24429 2023-05-09 08:33:48,532 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,532 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,532 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,532 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 54096 2023-05-09 08:33:48,594 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,594 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,594 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,594 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,667 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,667 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,667 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,667 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,739 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,739 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,740 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,740 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:48,934 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:48,934 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:48,934 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:48,934 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,004 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,004 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,004 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,004 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,073 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,073 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,073 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,073 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,145 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,145 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,145 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,145 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41688 2023-05-09 08:33:49,186 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,186 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,186 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,186 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 59861 2023-05-09 08:33:49,225 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,225 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,226 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,226 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,276 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,276 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,276 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,277 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 55379 2023-05-09 08:33:49,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,316 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,361 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,361 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,361 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,361 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 55944 2023-05-09 08:33:49,401 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,401 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,401 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,401 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 21584 2023-05-09 08:33:49,438 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,438 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,438 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,438 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 55287 2023-05-09 08:33:49,480 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,480 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,480 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,480 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,527 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,527 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,527 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,527 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 38974 2023-05-09 08:33:49,565 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,565 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,565 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,565 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,610 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,610 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,610 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,610 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39224 2023-05-09 08:33:49,649 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,649 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,649 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,649 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:33:49,692 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,692 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,692 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,692 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39798 2023-05-09 08:33:49,731 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,731 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,731 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,731 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19864 2023-05-09 08:33:49,769 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:49,769 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:49,769 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:49,769 UTC [2820947] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39469 2023-05-09 08:33:49,776 UTC [2820951] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 08:33:49,777 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 08:33:49,791 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:33:49,804 UTC [2820947] DEBUG esmvalcore._task:684 Collecting provenance of task diag_transect_vs_WOA/Transects_vs_WOA took 1.6 seconds 2023-05-09 08:33:49,804 UTC [2820947] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/Transects_vs_WOA (priority 48) in 0:00:19.728232 2023-05-09 08:33:49,886 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:33:49,887 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:33:49,887 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:33:49,888 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 08:33:49,888 UTC [2820951] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:33:49,899 UTC [2820951] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:33:49,899 UTC [2820951] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 08:33:49,909 UTC [2820951] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/so (priority 17) in 0:00:38.422368 2023-05-09 08:33:49,986 UTC [2820777] INFO esmvalcore._task:779 Progress: 4 tasks running, 3 tasks waiting for ancestors, 50/57 done 2023-05-09 08:33:50,087 UTC [2820777] INFO esmvalcore._task:779 Progress: 3 tasks running, 3 tasks waiting for ancestors, 51/57 done 2023-05-09 08:33:50,100 UTC [2820950] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries in process [2820950] 2023-05-09 08:33:50,104 UTC [2820950] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 08:33:50,104 UTC [2820950] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:33:50,104 UTC [2820950] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:50,104 UTC [2820950] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:50,104 UTC [2820950] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 08:33:50,104 UTC [2820950] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2023-05-09 08:33:50,104 UTC [2820950] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2023-05-09 08:33:50,187 UTC [2820777] INFO esmvalcore._task:779 Progress: 4 tasks running, 2 tasks waiting for ancestors, 51/57 done 2023-05-09 08:33:57,159 UTC [2820950] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 08:33:57,159 UTC [2820950] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:33:57,159 UTC [2820950] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 08:33:57,160 UTC [2820950] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 08:33:57,209 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,209 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,209 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,209 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 25417 2023-05-09 08:33:57,274 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,274 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,274 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,274 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37856 2023-05-09 08:33:57,344 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,344 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,344 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,344 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18271 2023-05-09 08:33:57,405 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,405 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,405 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,405 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15382 2023-05-09 08:33:57,466 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,466 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,466 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,466 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 52178 2023-05-09 08:33:57,525 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,529 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,529 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,529 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,529 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39563 2023-05-09 08:33:57,564 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,568 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,568 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,568 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,568 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42312 2023-05-09 08:33:57,603 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,608 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,608 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,608 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,608 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31450 2023-05-09 08:33:57,642 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,646 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,646 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,646 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,646 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 32415 2023-05-09 08:33:57,681 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,685 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,685 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,685 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,686 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27636 2023-05-09 08:33:57,720 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_so_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,724 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,724 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,725 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,725 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 13714 2023-05-09 08:33:57,753 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_thetao_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,758 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,758 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,758 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,758 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19348 2023-05-09 08:33:57,788 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_no3_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,794 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,794 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,794 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,794 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15284 2023-05-09 08:33:57,823 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_o2_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,828 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,828 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,828 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,828 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 17033 2023-05-09 08:33:57,857 UTC [2820950] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_si_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 08:33:57,862 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:33:57,862 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:33:57,862 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:33:57,862 UTC [2820950] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 16557 2023-05-09 08:33:57,892 UTC [2820950] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries took 0.7 seconds 2023-05-09 08:33:57,892 UTC [2820950] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries (priority 15) in 0:00:07.791678 2023-05-09 08:33:58,096 UTC [2820777] INFO esmvalcore._task:779 Progress: 3 tasks running, 2 tasks waiting for ancestors, 52/57 done 2023-05-09 08:34:04,286 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:34:04,288 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:34:04,312 UTC [2820952] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:34:04,312 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:34:04,314 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:34:04,326 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:34:04,327 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:34:04,328 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:34:04,329 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 08:34:04,329 UTC [2820952] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 08:34:04,342 UTC [2820952] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:34:04,342 UTC [2820952] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 08:34:04,352 UTC [2820952] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/so (priority 37) in 0:00:45.371218 2023-05-09 08:34:04,504 UTC [2820777] INFO esmvalcore._task:779 Progress: 2 tasks running, 2 tasks waiting for ancestors, 53/57 done 2023-05-09 08:34:06,134 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:34:06,135 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:34:06,157 UTC [2820948] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 08:34:06,158 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:34:06,159 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:34:06,171 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:34:06,172 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 08:34:06,172 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:34:06,174 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 08:34:06,175 UTC [2820948] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 08:34:06,188 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:34:06,188 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 08:34:06,193 UTC [2820948] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:34:06,193 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 08:34:06,193 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:34:06,194 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:34:06,194 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 08:34:06,194 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 08:34:06,194 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:34:06,194 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,206 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,206 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:34:06,206 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,217 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,217 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 08:34:06,217 UTC [2820948] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,228 UTC [2820948] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 08:34:06,228 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 08:34:06,231 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:34:06,234 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 08:34:06,237 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:34:06,240 UTC [2820948] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:34:06,244 UTC [2820948] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:34:06,246 UTC [2820948] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:34:06,248 UTC [2820948] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 08:34:06,253 UTC [2820948] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 08:34:06,255 UTC [2820948] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 08:34:06,256 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 08:34:06,257 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:34:06,258 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 08:34:06,258 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 08:34:06,261 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 08:34:06,262 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 08:34:06,262 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 08:34:06,263 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 08:34:06,263 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 08:34:06,264 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 08:34:06,264 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 08:34:06,264 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 08:34:06,268 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 08:34:06,268 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 08:34:06,273 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 08:34:06,274 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 08:34:06,275 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 08:34:06,276 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 08:34:06,277 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 08:34:06,279 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 08:34:06,279 UTC [2820948] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 08:34:06,325 UTC [2820948] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 08:34:06,325 UTC [2820948] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 08:34:06,335 UTC [2820948] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/thetao (priority 36) in 0:00:47.456983 2023-05-09 08:34:06,506 UTC [2820777] INFO esmvalcore._task:779 Progress: 1 tasks running, 2 tasks waiting for ancestors, 54/57 done 2023-05-09 08:34:06,524 UTC [2820949] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs in process [2820949] 2023-05-09 08:34:06,528 UTC [2820949] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml'] 2023-05-09 08:34:06,528 UTC [2820949] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:34:06,529 UTC [2820949] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 08:34:06,529 UTC [2820949] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 08:34:06,529 UTC [2820949] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 08:34:06,529 UTC [2820949] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/log.txt 2023-05-09 08:34:06,529 UTC [2820949] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml 2023-05-09 08:34:06,607 UTC [2820777] INFO esmvalcore._task:779 Progress: 3 tasks running, 0 tasks waiting for ancestors, 54/57 done 2023-05-09 08:34:06,639 UTC [2820946] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/Global_Ocean_surface_map in process [2820946] 2023-05-09 08:34:06,643 UTC [2820946] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml'] 2023-05-09 08:34:06,643 UTC [2820946] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 08:34:06,643 UTC [2820946] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 08:34:06,643 UTC [2820946] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 08:34:06,643 UTC [2820946] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 08:34:06,643 UTC [2820946] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/log.txt 2023-05-09 08:34:06,644 UTC [2820946] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0_mamba/bin/python /projects/NS2980K/conda/esmvaltool2.7.0_mamba/lib/python3.9/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml 2023-05-09 08:34:32,767 UTC [2820946] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.6 GB 2023-05-09 08:34:32,768 UTC [2820946] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:34:32,768 UTC [2820946] DEBUG esmvalcore._task:590 Script ocean/diagnostic_maps.py completed successfully 2023-05-09 08:34:32,768 UTC [2820946] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/diagnostic_provenance.yml 2023-05-09 08:34:32,801 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:32,801 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:32,801 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:32,801 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:32,846 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:32,846 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:32,846 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:32,846 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:32,891 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:32,892 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:32,892 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:32,892 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:32,937 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:32,937 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:32,938 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:32,938 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:32,983 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:32,983 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:32,983 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:32,983 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,027 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,027 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,027 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,027 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,070 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,070 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,070 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,070 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,114 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,114 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,114 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,115 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,161 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,161 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,161 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,161 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,208 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,208 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,208 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,208 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,253 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,253 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,254 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,254 UTC [2820946] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,292 UTC [2820946] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_vs_WOA/Global_Ocean_surface_map took 0.5 seconds 2023-05-09 08:34:33,292 UTC [2820946] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_surface_map (priority 34) in 0:00:26.652145 2023-05-09 08:34:33,434 UTC [2820777] INFO esmvalcore._task:779 Progress: 2 tasks running, 0 tasks waiting for ancestors, 55/57 done 2023-05-09 08:34:33,638 UTC [2820949] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.7 GB 2023-05-09 08:34:33,639 UTC [2820949] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:34:33,639 UTC [2820949] DEBUG esmvalcore._task:590 Script ocean/diagnostic_model_vs_obs.py completed successfully 2023-05-09 08:34:33,640 UTC [2820949] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/diagnostic_provenance.yml 2023-05-09 08:34:33,685 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,685 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,686 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,686 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:33,932 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:33,932 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:33,932 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:33,932 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,178 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,178 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,178 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,178 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 32319 2023-05-09 08:34:34,237 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,237 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,237 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,237 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,332 UTC [2820945] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.7 GB 2023-05-09 08:34:34,332 UTC [2820945] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:34:34,333 UTC [2820945] DEBUG esmvalcore._task:590 Script ocean/diagnostic_maps.py completed successfully 2023-05-09 08:34:34,333 UTC [2820945] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/run/diag_surface_maps_no_data/Global_Ocean_surface_map/diagnostic_provenance.yml 2023-05-09 08:34:34,354 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,354 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,354 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,354 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,405 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,405 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,405 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,405 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,452 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,452 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,452 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,453 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,487 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,487 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,487 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,487 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 35957 2023-05-09 08:34:34,499 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,499 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,499 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,499 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,549 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,549 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,549 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,549 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,553 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,553 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,553 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,554 UTC [2820945] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:34,597 UTC [2820945] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_no_data/Global_Ocean_surface_map took 0.3 seconds 2023-05-09 08:34:34,597 UTC [2820945] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/Global_Ocean_surface_map (priority 42) in 0:01:07.486484 2023-05-09 08:34:34,736 UTC [2820777] INFO esmvalcore._task:779 Progress: 1 tasks running, 0 tasks waiting for ancestors, 56/57 done 2023-05-09 08:34:34,799 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:34,799 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:34,799 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:34,799 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 08:34:35,041 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 08:34:35,041 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 08:34:35,041 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 08:34:35,041 UTC [2820949] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 33711 2023-05-09 08:34:35,088 UTC [2820949] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs took 1.4 seconds 2023-05-09 08:34:35,089 UTC [2820949] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs (priority 35) in 0:00:28.563828 2023-05-09 08:34:35,137 UTC [2820777] INFO esmvalcore._task:779 Progress: 0 tasks running, 0 tasks waiting for ancestors, 57/57 done 2023-05-09 08:34:35,137 UTC [2820777] INFO esmvalcore._task:784 Successfully completed all tasks. 2023-05-09 08:34:35,989 UTC [2820777] INFO esmvalcore.experimental.recipe_output:212 Wrote recipe output to: file:///projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_083306/index.html 2023-05-09 08:34:35,989 UTC [2820777] INFO esmvalcore._main:127 Ending the Earth System Model Evaluation Tool at time: 2023-05-09 08:34:35 UTC 2023-05-09 08:34:35,989 UTC [2820777] INFO esmvalcore._main:130 Time for running the recipe was: 0:01:28.598670 2023-05-09 08:34:36,928 UTC [2820777] INFO esmvalcore._task:127 Maximum memory used (estimate): 21.6 GB 2023-05-09 08:34:36,928 UTC [2820777] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 08:34:36,929 UTC [2820777] INFO esmvalcore._main:454 Removing preproc containing preprocessed data 2023-05-09 08:34:36,929 UTC [2820777] INFO esmvalcore._main:455 If this data is further needed, then 2023-05-09 08:34:36,929 UTC [2820777] INFO esmvalcore._main:456 set remove_preproc_dir to false in config-user.yml 2023-05-09 08:34:36,957 UTC [2820777] INFO esmvalcore._main:446 Run was successful