2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:473 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:474 Package versions 2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:475 ---------------- 2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:476 ESMValCore: 2.7.0 2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:478 ESMValTool: 2.7.0 2023-05-09 07:32:30,187 UTC [2798107] INFO esmvalcore._main:479 ---------------- 2023-05-09 07:32:30,188 UTC [2798107] INFO esmvalcore._main:480 Using config file /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/config-ipcc_node-270.yml 2023-05-09 07:32:30,188 UTC [2798107] INFO esmvalcore._main:481 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/main_log_debug.txt 2023-05-09 07:32:30,188 UTC [2798107] INFO esmvalcore._main:86 Starting the Earth System Model Evaluation Tool at time: 2023-05-09 07:32:30 UTC 2023-05-09 07:32:30,188 UTC [2798107] INFO esmvalcore._main:90 ---------------------------------------------------------------------- 2023-05-09 07:32:30,188 UTC [2798107] INFO esmvalcore._main:91 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/rundir_ipcc_node/recipe_ocean_bgc.yml 2023-05-09 07:32:30,189 UTC [2798107] INFO esmvalcore._main:92 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run 2023-05-09 07:32:30,189 UTC [2798107] INFO esmvalcore._main:93 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work 2023-05-09 07:32:30,189 UTC [2798107] INFO esmvalcore._main:94 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc 2023-05-09 07:32:30,189 UTC [2798107] INFO esmvalcore._main:95 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots 2023-05-09 07:32:30,189 UTC [2798107] INFO esmvalcore._main:96 ---------------------------------------------------------------------- 2023-05-09 07:32:30,190 UTC [2798107] INFO esmvalcore._main:100 Running tasks using at most 8 processes 2023-05-09 07:32:30,191 UTC [2798107] INFO esmvalcore._main:102 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2023-05-09 07:32:30,191 UTC [2798107] INFO esmvalcore._main:105 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2023-05-09 07:32:30,192 UTC [2798107] DEBUG esmvalcore._recipe_checks:47 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvalcore/recipe_schema.yml 2023-05-09 07:32:30,267 UTC [2798107] DEBUG esmvalcore._recipe:1342 Retrieving diagnostics from recipe 2023-05-09 07:32:30,267 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 07:32:30,267 UTC [2798107] DEBUG esmvalcore._config._config:48 Loading extra facets from /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvalcore/_config/extra_facets/cmip5-institutes.yml 2023-05-09 07:32:30,295 UTC [2798107] DEBUG esmvalcore._config._config:48 Loading extra facets from /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvalcore/_config/extra_facets/cmip5-product.yml 2023-05-09 07:32:30,302 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 07:32:30,302 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 07:32:30,302 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 07:32:30,302 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 07:32:30,303 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 07:32:30,303 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 07:32:30,304 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 07:32:30,304 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_timeseries_scalars 2023-05-09 07:32:30,304 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_timeseries_scalars 2023-05-09 07:32:30,304 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_profile_vs_WOA 2023-05-09 07:32:30,305 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_profile_vs_WOA 2023-05-09 07:32:30,305 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_profile_no_obs 2023-05-09 07:32:30,305 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_profile_no_obs 2023-05-09 07:32:30,305 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_surface_maps_vs_WOA 2023-05-09 07:32:30,306 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_surface_maps_vs_WOA 2023-05-09 07:32:30,306 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_surface_maps_no_data 2023-05-09 07:32:30,307 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_surface_maps_no_data 2023-05-09 07:32:30,307 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_transect_vs_WOA 2023-05-09 07:32:30,308 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_transect_vs_WOA 2023-05-09 07:32:30,308 UTC [2798107] DEBUG esmvalcore._recipe:1479 Populating list of variables for diagnostic diag_transect_no_data 2023-05-09 07:32:30,308 UTC [2798107] DEBUG esmvalcore._recipe:1609 Setting script for diagnostic diag_transect_no_data 2023-05-09 07:32:30,308 UTC [2798107] INFO esmvalcore._recipe:1845 Creating tasks from recipe 2023-05-09 07:32:30,308 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_volume_average_vs_WOA 2023-05-09 07:32:30,308 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:30,309 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/thetao 2023-05-09 07:32:30,309 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'thetao' 2023-05-09 07:32:30,312 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,314 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,315 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,315 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,319 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 07:32:30,321 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:30,322 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:30,382 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,383 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,383 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 07:32:30,383 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,384 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:30,384 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:30,467 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao created. 2023-05-09 07:32:30,467 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:30,468 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/so 2023-05-09 07:32:30,468 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'so' 2023-05-09 07:32:30,468 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,469 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,469 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,469 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,470 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 07:32:30,471 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:30,471 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:30,520 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,520 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,520 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 07:32:30,521 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,521 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:30,521 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:30,572 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so created. 2023-05-09 07:32:30,572 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:30,573 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/no3 2023-05-09 07:32:30,573 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'no3' 2023-05-09 07:32:30,573 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,574 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,574 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,574 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,575 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 07:32:30,575 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:30,575 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:30,620 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,620 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,620 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 07:32:30,620 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,621 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:30,621 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:30,685 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 created. 2023-05-09 07:32:30,685 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:30,686 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/o2 2023-05-09 07:32:30,686 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'o2' 2023-05-09 07:32:30,686 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,687 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,687 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,687 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,687 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 07:32:30,688 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:30,688 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:30,728 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,728 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,728 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 07:32:30,728 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,729 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:30,729 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:30,827 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 created. 2023-05-09 07:32:30,827 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:30,828 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_vs_WOA/si 2023-05-09 07:32:30,828 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'si' 2023-05-09 07:32:30,828 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,829 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,829 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,829 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,830 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 07:32:30,830 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:30,830 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:30,876 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,876 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_volcello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,876 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'volcello' of dataset OBS 2023-05-09 07:32:30,877 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:30,877 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:30,877 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:30,924 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si created. 2023-05-09 07:32:30,924 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:30,924 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_volume_average_no_obs 2023-05-09 07:32:30,924 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 07:32:30,924 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/chl 2023-05-09 07:32:30,924 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'chl' 2023-05-09 07:32:30,925 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,925 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,925 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,926 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,926 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 07:32:30,927 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:30,927 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:30,970 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/chl created. 2023-05-09 07:32:30,970 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:30,970 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/dfe 2023-05-09 07:32:30,970 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'dfe' 2023-05-09 07:32:30,971 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:30,971 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:30,971 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:30,971 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:30,972 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 07:32:30,972 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:30,972 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,015 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe created. 2023-05-09 07:32:31,015 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:31,016 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_volume_average_no_obs/talk 2023-05-09 07:32:31,016 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_global_volume_average' task for variable 'talk' 2023-05-09 07:32:31,016 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'volcello', found table 'fx' 2023-05-09 07:32:31,016 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['volcello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello'] 2023-05-09 07:32:31,017 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'volcello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,017 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step volume_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,018 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 07:32:31,018 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,018 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,061 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_volume_average_no_obs/talk created. 2023-05-09 07:32:31,061 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_volume_average_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:31,062 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_surface_average_no_obs 2023-05-09 07:32:31,062 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 07:32:31,062 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/talk 2023-05-09 07:32:31,062 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'talk' 2023-05-09 07:32:31,062 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,064 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,064 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,065 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,065 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,065 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,066 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,066 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,066 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 07:32:31,067 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,067 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,068 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/talk created. 2023-05-09 07:32:31,069 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:31,069 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/intpp 2023-05-09 07:32:31,069 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_2D' task for variable 'intpp' 2023-05-09 07:32:31,069 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,070 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,070 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,070 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable intpp during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,070 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,071 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,071 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,071 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable intpp during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,072 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2023-05-09 07:32:31,073 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:31,073 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,110 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp created. 2023-05-09 07:32:31,110 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/intpp will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:31,110 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/chl 2023-05-09 07:32:31,111 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'chl' 2023-05-09 07:32:31,111 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,111 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,112 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,112 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,112 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,112 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,112 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,113 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,113 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 07:32:31,113 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,113 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,115 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/chl created. 2023-05-09 07:32:31,115 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:31,116 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_no_obs/areacello 2023-05-09 07:32:31,116 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 07:32:31,116 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,116 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:31,116 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,131 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello created. 2023-05-09 07:32:31,131 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_no_obs/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:31,132 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_surface_average_vs_WOA 2023-05-09 07:32:31,132 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:31,132 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/thetao 2023-05-09 07:32:31,132 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'thetao' 2023-05-09 07:32:31,133 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,133 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,133 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,133 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,134 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,134 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,134 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,134 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,135 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 07:32:31,135 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,135 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,136 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,136 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,137 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,137 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,137 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,138 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,138 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,138 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:31,139 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,148 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao created. 2023-05-09 07:32:31,148 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:31,148 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/so 2023-05-09 07:32:31,148 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'so' 2023-05-09 07:32:31,149 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,149 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,149 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,149 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,150 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,150 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,150 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,150 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,151 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 07:32:31,151 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,151 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,152 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,153 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,153 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,153 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,153 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,153 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,154 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,154 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:31,154 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,167 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so created. 2023-05-09 07:32:31,167 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:31,167 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/no3 2023-05-09 07:32:31,167 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'no3' 2023-05-09 07:32:31,168 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,168 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,168 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,169 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,169 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,169 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,169 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,170 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,170 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 07:32:31,170 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,170 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,171 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,171 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,172 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,172 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,172 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,172 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,173 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,173 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:31,173 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,182 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 created. 2023-05-09 07:32:31,182 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:31,182 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/o2 2023-05-09 07:32:31,183 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'o2' 2023-05-09 07:32:31,183 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,183 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,184 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,184 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,184 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,184 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,184 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,185 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,185 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 07:32:31,185 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,185 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,186 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,186 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,187 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,187 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,187 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,187 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,188 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,188 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:31,188 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,237 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 created. 2023-05-09 07:32:31,237 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:31,238 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/si 2023-05-09 07:32:31,238 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_Surface_average_timeseries_3D' task for variable 'si' 2023-05-09 07:32:31,238 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,239 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,239 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,239 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,239 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,239 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,240 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,240 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,240 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 07:32:31,240 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,240 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,242 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,242 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,242 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,242 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,242 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,243 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,243 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,243 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:31,243 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,252 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si created. 2023-05-09 07:32:31,252 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:31,253 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_surface_average_vs_WOA/areacello 2023-05-09 07:32:31,253 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 07:32:31,253 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,253 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:31,253 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,255 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello created. 2023-05-09 07:32:31,255 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_surface_average_vs_WOA/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:31,255 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_timeseries_scalars 2023-05-09 07:32:31,255 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_timeseries_scalars/Scalar_timeseries 2023-05-09 07:32:31,256 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_timeseries_scalars/mfo 2023-05-09 07:32:31,256 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_timeseries_scalar' task for variable 'mfo' 2023-05-09 07:32:31,256 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['mfo_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo'] 2023-05-09 07:32:31,257 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable mfo of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 07:32:31,257 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,276 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_timeseries_scalars/mfo created. 2023-05-09 07:32:31,276 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_timeseries_scalars/mfo will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 07:32:31,276 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_profile_vs_WOA 2023-05-09 07:32:31,276 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 07:32:31,276 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/thetao 2023-05-09 07:32:31,276 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'thetao' 2023-05-09 07:32:31,277 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,277 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,278 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,278 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,278 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,278 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,278 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,279 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable thetao during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,279 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 07:32:31,280 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,280 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,281 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,281 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,281 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,281 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,281 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,282 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,282 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,282 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:31,282 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,291 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/thetao created. 2023-05-09 07:32:31,291 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:31,292 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/so 2023-05-09 07:32:31,292 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'so' 2023-05-09 07:32:31,292 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,293 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,293 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,293 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,293 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,293 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,294 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,294 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable so during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,294 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 07:32:31,295 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,295 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,296 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,296 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,296 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,296 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,297 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,297 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,297 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,298 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:31,298 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,306 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/so created. 2023-05-09 07:32:31,306 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:31,307 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/no3 2023-05-09 07:32:31,307 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'no3' 2023-05-09 07:32:31,307 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,308 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,308 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,308 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,308 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,309 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,309 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,309 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable no3 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,309 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 07:32:31,310 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,310 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,311 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,311 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,311 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,311 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,312 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,312 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,312 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,312 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:31,313 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,322 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/no3 created. 2023-05-09 07:32:31,322 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:31,323 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/o2 2023-05-09 07:32:31,323 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'o2' 2023-05-09 07:32:31,323 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,324 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,324 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,324 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,324 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,325 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,325 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,325 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable o2 during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,325 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 07:32:31,326 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,326 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,327 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,327 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,327 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,327 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,327 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,328 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,328 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,328 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:31,328 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,337 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/o2 created. 2023-05-09 07:32:31,337 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:31,338 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_vs_WOA/si 2023-05-09 07:32:31,338 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'si' 2023-05-09 07:32:31,338 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,339 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,339 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,339 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,339 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,340 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,340 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,340 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable si during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,340 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 07:32:31,341 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,341 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,342 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,342 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacella[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,342 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacella' of dataset OBS 2023-05-09 07:32:31,342 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,342 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_fx_areacello[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,343 UTC [2798107] WARNING esmvalcore._recipe:445 Missing data for fx variable 'areacello' of dataset OBS 2023-05-09 07:32:31,343 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,343 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:31,343 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,352 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_vs_WOA/si created. 2023-05-09 07:32:31,352 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:31,353 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_profile_no_obs 2023-05-09 07:32:31,353 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:31,353 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/chl 2023-05-09 07:32:31,353 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'chl' 2023-05-09 07:32:31,353 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,354 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,354 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,354 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,354 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,355 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,355 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,355 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable chl during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,355 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 07:32:31,356 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,356 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,357 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/chl created. 2023-05-09 07:32:31,357 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:31,358 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/dfe 2023-05-09 07:32:31,358 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'dfe' 2023-05-09 07:32:31,358 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,359 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,359 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,359 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,359 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,360 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,360 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,360 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable dfe during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,360 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 07:32:31,360 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,361 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,362 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/dfe created. 2023-05-09 07:32:31,362 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:31,363 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_profile_no_obs/talk 2023-05-09 07:32:31,363 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_global_profile' task for variable 'talk' 2023-05-09 07:32:31,363 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacella', found table 'fx' 2023-05-09 07:32:31,364 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacella_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella'] 2023-05-09 07:32:31,364 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacella': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,364 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,364 UTC [2798107] DEBUG esmvalcore._recipe:378 For fx variable 'areacello', found table 'fx' 2023-05-09 07:32:31,364 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,365 UTC [2798107] DEBUG esmvalcore._recipe:382 Found fx variables 'areacello': ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] 2023-05-09 07:32:31,365 UTC [2798107] DEBUG esmvalcore._recipe:492 Using fx files for variable talk during step area_statistics: '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' 2023-05-09 07:32:31,365 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['talk_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk'] 2023-05-09 07:32:31,365 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable talk of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,365 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,367 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_profile_no_obs/talk created. 2023-05-09 07:32:31,367 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_profile_no_obs/talk will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:31,368 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_surface_maps_vs_WOA 2023-05-09 07:32:31,368 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 07:32:31,368 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 07:32:31,368 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/thetao 2023-05-09 07:32:31,368 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'thetao' 2023-05-09 07:32:31,369 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 07:32:31,370 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,370 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,371 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,371 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:31,371 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,381 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/thetao created. 2023-05-09 07:32:31,381 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:31,381 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/so 2023-05-09 07:32:31,381 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'so' 2023-05-09 07:32:31,382 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 07:32:31,382 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,383 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,384 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,384 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:31,384 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,393 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/so created. 2023-05-09 07:32:31,393 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:31,394 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/no3 2023-05-09 07:32:31,394 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'no3' 2023-05-09 07:32:31,394 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 07:32:31,395 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,395 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,396 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,396 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:31,396 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,405 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/no3 created. 2023-05-09 07:32:31,405 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:31,406 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/si 2023-05-09 07:32:31,406 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'si' 2023-05-09 07:32:31,407 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 07:32:31,407 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,407 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,408 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,408 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:31,409 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,418 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/si created. 2023-05-09 07:32:31,418 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:31,418 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/o2 2023-05-09 07:32:31,418 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_regrid_3D' task for variable 'o2' 2023-05-09 07:32:31,419 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 07:32:31,419 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,419 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,420 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,421 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:31,421 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,430 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/o2 created. 2023-05-09 07:32:31,430 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:31,430 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_vs_WOA/areacello 2023-05-09 07:32:31,430 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 07:32:31,431 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,431 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:31,431 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,432 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_vs_WOA/areacello created. 2023-05-09 07:32:31,433 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_vs_WOA/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:31,433 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_surface_maps_no_data 2023-05-09 07:32:31,433 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 07:32:31,433 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/intpp 2023-05-09 07:32:31,433 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_2D' task for variable 'intpp' 2023-05-09 07:32:31,434 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['intpp_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp'] 2023-05-09 07:32:31,434 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable intpp of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:31,434 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,436 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/intpp created. 2023-05-09 07:32:31,436 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/intpp will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:31,436 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/fgco2 2023-05-09 07:32:31,436 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_2D' task for variable 'fgco2' 2023-05-09 07:32:31,437 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['fgco2_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2'] 2023-05-09 07:32:31,438 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable fgco2 of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:31,438 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,477 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/fgco2 created. 2023-05-09 07:32:31,477 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/fgco2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 07:32:31,477 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/chl 2023-05-09 07:32:31,477 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_3D' task for variable 'chl' 2023-05-09 07:32:31,478 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 07:32:31,478 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,478 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,481 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/chl created. 2023-05-09 07:32:31,481 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:31,481 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/dfe 2023-05-09 07:32:31,481 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_surface_map_3D' task for variable 'dfe' 2023-05-09 07:32:31,482 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 07:32:31,482 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,482 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,484 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/dfe created. 2023-05-09 07:32:31,484 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:31,485 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_surface_maps_no_data/areacello 2023-05-09 07:32:31,485 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'default' task for variable 'areacello' 2023-05-09 07:32:31,485 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['areacello_fx_HadGEM2-ES_historical_r0i0p0*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello'] 2023-05-09 07:32:31,485 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable areacello of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:31,485 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,487 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_surface_maps_no_data/areacello created. 2023-05-09 07:32:31,487 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_surface_maps_no_data/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:31,488 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_transect_vs_WOA 2023-05-09 07:32:31,488 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 07:32:31,488 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/thetao 2023-05-09 07:32:31,488 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'thetao' 2023-05-09 07:32:31,489 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['thetao_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao'] 2023-05-09 07:32:31,490 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,490 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,491 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_thetao[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,491 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable thetao of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:31,491 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,501 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/thetao created. 2023-05-09 07:32:31,502 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/thetao will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:31,502 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/so 2023-05-09 07:32:31,502 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'so' 2023-05-09 07:32:31,503 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['so_Omon_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so'] 2023-05-09 07:32:31,503 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,503 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,505 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Omon_so[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,505 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable so of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:31,505 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,515 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/so created. 2023-05-09 07:32:31,515 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/so will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:31,516 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/no3 2023-05-09 07:32:31,516 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'no3' 2023-05-09 07:32:31,517 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['no3_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3'] 2023-05-09 07:32:31,517 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,517 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,518 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_no3[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,518 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable no3 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:31,519 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,528 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/no3 created. 2023-05-09 07:32:31,528 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/no3 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:31,528 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/si 2023-05-09 07:32:31,528 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'si' 2023-05-09 07:32:31,529 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['si_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si'] 2023-05-09 07:32:31,529 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,529 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,530 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_si[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,531 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable si of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:31,531 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,542 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/si created. 2023-05-09 07:32:31,543 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/si will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:31,543 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_vs_WOA/o2 2023-05-09 07:32:31,543 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'o2' 2023-05-09 07:32:31,544 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['o2_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2'] 2023-05-09 07:32:31,544 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset CMIP5: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,545 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for CMIP5 2023-05-09 07:32:31,546 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['OBS_WOA_clim_2013v2_Oyr_o2[_.]*nc'] in ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA', '/projects/NS9252K/obsdata/Tier2/WOA', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA'] 2023-05-09 07:32:31,546 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable o2 of dataset OBS: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:31,547 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for OBS 2023-05-09 07:32:31,556 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_vs_WOA/o2 created. 2023-05-09 07:32:31,557 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_vs_WOA/o2 will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:31,557 UTC [2798107] INFO esmvalcore._recipe:1854 Creating tasks for diagnostic diag_transect_no_data 2023-05-09 07:32:31,557 UTC [2798107] INFO esmvalcore._recipe:1728 Creating diagnostic task diag_transect_no_data/Transects_no_data 2023-05-09 07:32:31,557 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_no_data/chl 2023-05-09 07:32:31,557 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'chl' 2023-05-09 07:32:31,558 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['chl_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl'] 2023-05-09 07:32:31,558 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable chl of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,558 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,560 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_no_data/chl created. 2023-05-09 07:32:31,560 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_no_data/chl will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:31,561 UTC [2798107] INFO esmvalcore._recipe:1825 Creating preprocessor task diag_transect_no_data/dfe 2023-05-09 07:32:31,561 UTC [2798107] INFO esmvalcore._recipe:1214 Creating preprocessor 'prep_transect_AMT' task for variable 'dfe' 2023-05-09 07:32:31,561 UTC [2798107] DEBUG esmvalcore._data_finder:19 Looking for files matching ['dfe_Oyr_HadGEM2-ES_historical_r1i1p1*.nc'] in ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe'] 2023-05-09 07:32:31,562 UTC [2798107] DEBUG esmvalcore._recipe:624 Using input files for variable dfe of dataset HadGEM2-ES: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,562 UTC [2798107] INFO esmvalcore._recipe:633 Found input files for HadGEM2-ES 2023-05-09 07:32:31,563 UTC [2798107] INFO esmvalcore._recipe:1095 PreprocessingTask diag_transect_no_data/dfe created. 2023-05-09 07:32:31,564 UTC [2798107] DEBUG esmvalcore._recipe:1096 PreprocessingTask diag_transect_no_data/dfe will create the files: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:31,564 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_volume_average_vs_WOA script Global_Volume_Average_timeseries 2023-05-09 07:32:31,564 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/thetao matches ['diag_timeseries_volume_average_vs_WOA/thetao'] 2023-05-09 07:32:31,565 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/so matches ['diag_timeseries_volume_average_vs_WOA/so'] 2023-05-09 07:32:31,565 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/no3 matches ['diag_timeseries_volume_average_vs_WOA/no3'] 2023-05-09 07:32:31,565 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/o2 matches ['diag_timeseries_volume_average_vs_WOA/o2'] 2023-05-09 07:32:31,565 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_vs_WOA/si matches ['diag_timeseries_volume_average_vs_WOA/si'] 2023-05-09 07:32:31,565 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_volume_average_no_obs script Global_Volume_verage_timeseries 2023-05-09 07:32:31,566 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/chl matches ['diag_timeseries_volume_average_no_obs/chl'] 2023-05-09 07:32:31,566 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/dfe matches ['diag_timeseries_volume_average_no_obs/dfe'] 2023-05-09 07:32:31,566 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_volume_average_no_obs/talk matches ['diag_timeseries_volume_average_no_obs/talk'] 2023-05-09 07:32:31,566 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_surface_average_no_obs script Global_Volume_Average_timeseries 2023-05-09 07:32:31,566 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/talk matches ['diag_timeseries_surface_average_no_obs/talk'] 2023-05-09 07:32:31,567 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/intpp matches ['diag_timeseries_surface_average_no_obs/intpp'] 2023-05-09 07:32:31,567 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/chl matches ['diag_timeseries_surface_average_no_obs/chl'] 2023-05-09 07:32:31,567 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_no_obs/areacello matches ['diag_timeseries_surface_average_no_obs/areacello'] 2023-05-09 07:32:31,567 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_surface_average_vs_WOA script Global_Volume_Average_timeseries 2023-05-09 07:32:31,567 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/thetao matches ['diag_timeseries_surface_average_vs_WOA/thetao'] 2023-05-09 07:32:31,568 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/so matches ['diag_timeseries_surface_average_vs_WOA/so'] 2023-05-09 07:32:31,568 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/no3 matches ['diag_timeseries_surface_average_vs_WOA/no3'] 2023-05-09 07:32:31,568 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/o2 matches ['diag_timeseries_surface_average_vs_WOA/o2'] 2023-05-09 07:32:31,568 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/si matches ['diag_timeseries_surface_average_vs_WOA/si'] 2023-05-09 07:32:31,568 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_surface_average_vs_WOA/areacello matches ['diag_timeseries_surface_average_vs_WOA/areacello'] 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_timeseries_scalars script Scalar_timeseries 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_timeseries_scalars/mfo matches ['diag_timeseries_scalars/mfo'] 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_profile_vs_WOA script Global_profile_vs_WOA 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/thetao matches ['diag_profile_vs_WOA/thetao'] 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/so matches ['diag_profile_vs_WOA/so'] 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/no3 matches ['diag_profile_vs_WOA/no3'] 2023-05-09 07:32:31,569 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/o2 matches ['diag_profile_vs_WOA/o2'] 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_vs_WOA/si matches ['diag_profile_vs_WOA/si'] 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_profile_no_obs script Global_profile_no_obs 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/chl matches ['diag_profile_no_obs/chl'] 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/dfe matches ['diag_profile_no_obs/dfe'] 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_profile_no_obs/talk matches ['diag_profile_no_obs/talk'] 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_surface_map 2023-05-09 07:32:31,570 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2023-05-09 07:32:31,571 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_vs_WOA script Global_Ocean_model_vs_obs 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/thetao matches ['diag_surface_maps_vs_WOA/thetao'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/so matches ['diag_surface_maps_vs_WOA/so'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/no3 matches ['diag_surface_maps_vs_WOA/no3'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/si matches ['diag_surface_maps_vs_WOA/si'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/o2 matches ['diag_surface_maps_vs_WOA/o2'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_vs_WOA/areacello matches ['diag_surface_maps_vs_WOA/areacello'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_surface_maps_no_data script Global_Ocean_surface_map 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/intpp matches ['diag_surface_maps_no_data/intpp'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/fgco2 matches ['diag_surface_maps_no_data/fgco2'] 2023-05-09 07:32:31,572 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/chl matches ['diag_surface_maps_no_data/chl'] 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/dfe matches ['diag_surface_maps_no_data/dfe'] 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_surface_maps_no_data/areacello matches ['diag_surface_maps_no_data/areacello'] 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_transect_vs_WOA script Transects_vs_WOA 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/thetao matches ['diag_transect_vs_WOA/thetao'] 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/so matches ['diag_transect_vs_WOA/so'] 2023-05-09 07:32:31,573 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/no3 matches ['diag_transect_vs_WOA/no3'] 2023-05-09 07:32:31,574 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/si matches ['diag_transect_vs_WOA/si'] 2023-05-09 07:32:31,574 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_vs_WOA/o2 matches ['diag_transect_vs_WOA/o2'] 2023-05-09 07:32:31,574 UTC [2798107] DEBUG esmvalcore._recipe:1656 Linking tasks for diagnostic diag_transect_no_data script Transects_no_data 2023-05-09 07:32:31,574 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_no_data/chl matches ['diag_transect_no_data/chl'] 2023-05-09 07:32:31,574 UTC [2798107] DEBUG esmvalcore._recipe:1665 Pattern diag_transect_no_data/dfe matches ['diag_transect_no_data/dfe'] 2023-05-09 07:32:31,574 UTC [2798107] INFO esmvalcore._recipe:1894 These tasks will be executed: diag_profile_vs_WOA/Global_profile_vs_WOA, diag_timeseries_surface_average_no_obs/areacello, diag_profile_vs_WOA/si, diag_surface_maps_vs_WOA/si, diag_transect_vs_WOA/so, diag_timeseries_surface_average_vs_WOA/areacello, diag_timeseries_surface_average_vs_WOA/no3, diag_timeseries_surface_average_no_obs/talk, diag_profile_no_obs/chl, diag_profile_vs_WOA/o2, diag_profile_vs_WOA/no3, diag_surface_maps_vs_WOA/so, diag_surface_maps_vs_WOA/Global_Ocean_surface_map, diag_timeseries_surface_average_vs_WOA/o2, diag_profile_no_obs/Global_profile_no_obs, diag_transect_vs_WOA/Transects_vs_WOA, diag_profile_no_obs/dfe, diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries, diag_surface_maps_no_data/dfe, diag_profile_no_obs/talk, diag_timeseries_surface_average_vs_WOA/si, diag_timeseries_volume_average_vs_WOA/si, diag_timeseries_volume_average_vs_WOA/so, diag_timeseries_scalars/Scalar_timeseries, diag_profile_vs_WOA/so, diag_timeseries_volume_average_vs_WOA/o2, diag_surface_maps_vs_WOA/thetao, diag_surface_maps_vs_WOA/o2, diag_timeseries_volume_average_no_obs/chl, diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs, diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries, diag_transect_no_data/dfe, diag_timeseries_volume_average_vs_WOA/thetao, diag_timeseries_surface_average_no_obs/chl, diag_surface_maps_no_data/Global_Ocean_surface_map, diag_transect_vs_WOA/no3, diag_surface_maps_no_data/areacello, diag_transect_no_data/chl, diag_timeseries_scalars/mfo, diag_timeseries_surface_average_vs_WOA/so, diag_timeseries_volume_average_no_obs/talk, diag_transect_no_data/Transects_no_data, diag_profile_vs_WOA/thetao, diag_transect_vs_WOA/o2, diag_surface_maps_vs_WOA/no3, diag_timeseries_surface_average_no_obs/intpp, diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries, diag_surface_maps_vs_WOA/areacello, diag_transect_vs_WOA/thetao, diag_surface_maps_no_data/chl, diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries, diag_transect_vs_WOA/si, diag_timeseries_surface_average_vs_WOA/thetao, diag_surface_maps_no_data/intpp, diag_surface_maps_no_data/fgco2, diag_timeseries_volume_average_vs_WOA/no3, diag_timeseries_volume_average_no_obs/dfe 2023-05-09 07:32:31,597 UTC [2798107] DEBUG esmvalcore._main:122 Recipe summary: DiagnosticTask: diag_profile_vs_WOA/Global_profile_vs_WOA script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_vs_WOA/Global_profile_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA', 'script': 'Global_profile_vs_WOA', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_profile_vs_WOA/Global_profile_vs_WOA'} ancestors: PreprocessingTask: diag_profile_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_profile_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_profile_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_profile', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_no_data/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_no_data/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_no_data/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_no_data/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/fgco2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'fgco2'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Surface Downward CO2 Flux', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'fgco2', 'preprocessor': 'prep_surface_map_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'fgco2', 'standard_name': 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', 'timerange': '2001/2004', 'units': 'kg m-2 s-1', 'variable_group': 'fgco2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_surface_map_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_no_data/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}, 'volume_statistics': {'operator': 'mean'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None DiagnosticTask: diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/intpp order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'intpp'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types of ' 'Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Primary Organic Carbon Production by All Types ' 'of Phytoplankton', 'mip': 'Omon', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'intpp', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'intpp', 'standard_name': 'net_primary_mole_productivity_of_carbon_by_phytoplankton', 'timerange': '2001/2004', 'units': 'mol m-2 s-1', 'variable_group': 'intpp'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_no_obs/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_timeseries_scalars/Scalar_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries', 'script': 'Scalar_timeseries', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_scalars/Scalar_timeseries'} ancestors: PreprocessingTask: diag_timeseries_scalars/mfo order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'mfo'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_scalars', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Transport', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'mfo', 'preprocessor': 'prep_timeseries_scalar', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'mfo', 'standard_name': 'sea_water_transport_across_line', 'timerange': '2001/2004', 'units': 'kg s-1', 'variable_group': 'mfo'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries', 'script': 'Global_Volume_Average_timeseries', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries'} ancestors: PreprocessingTask: diag_timeseries_surface_average_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_timeseries_surface_average_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_transect_no_data/Transects_no_data script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_transect_no_data/Transects_no_data', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data', 'script': 'Transects_no_data', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_transect_no_data/Transects_no_data'} ancestors: PreprocessingTask: diag_transect_no_data/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_no_data/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_no_data', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs script: ocean/diagnostic_model_vs_obs.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'observational_dataset': {'dataset': 'WOA', 'project': 'OBS'}, 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs', 'script': 'Global_Ocean_model_vs_obs', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries script: ocean/diagnostic_timeseries.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries', 'script': 'Global_Volume_verage_timeseries', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries'} ancestors: PreprocessingTask: diag_timeseries_volume_average_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None PreprocessingTask: diag_timeseries_volume_average_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}, 'volume_statistics': {'operator': 'mean'}} ancestors: None DiagnosticTask: diag_surface_maps_vs_WOA/Global_Ocean_surface_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map', 'script': 'Global_Ocean_surface_map', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map'} ancestors: PreprocessingTask: diag_surface_maps_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_levels': {'levels': [0.0], 'scheme': 'linear_extrapolate'}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_surface_maps_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_surface_map_regrid_3D', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_surface_maps_vs_WOA/areacello order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed']}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'fx', 'mip': 'fx', 'short_name': 'areacello'}, 'concatenate': {}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_surface_maps_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'default', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'}} ancestors: None DiagnosticTask: diag_profile_no_obs/Global_profile_no_obs script: ocean/diagnostic_profiles.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_no_obs/Global_profile_no_obs', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs', 'script': 'Global_profile_no_obs', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_profile_no_obs/Global_profile_no_obs'} ancestors: PreprocessingTask: diag_profile_no_obs/chl order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'chl'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Chlorophyll Mass Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'chl', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'chl', 'standard_name': 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', 'timerange': '2001/2004', 'units': 'kg m-3', 'variable_group': 'chl'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/dfe order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'dfe'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Iron Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'dfe', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'dfe', 'standard_name': 'mole_concentration_of_dissolved_iron_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'dfe'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_profile_no_obs/talk order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean ' 'Grid-Cell ' 'Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}}, 'annual_statistics': {'operator': 'mean'}, 'area_statistics': {'operator': 'mean'}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed']}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'talk'}, 'concatenate': {}, 'fix_data': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_file': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'fix_metadata': {'alias': 'HadGEM2-ES', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Total Alkalinity', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'talk', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'talk', 'standard_name': 'sea_water_alkalinity_expressed_as_mole_equivalent', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'talk'}, 'load': {'callback': }, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'}} ancestors: None DiagnosticTask: diag_transect_vs_WOA/Transects_vs_WOA script: ocean/diagnostic_transects.py settings: {'auxiliary_data_dir': '/projects/NS9252K/share/esmvaltool/auxiliary_data', 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_transect_vs_WOA/Transects_vs_WOA', 'profile_diagnostic': False, 'recipe': 'recipe_ocean_bgc.yml', 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA', 'script': 'Transects_vs_WOA', 'version': '2.7.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_transect_vs_WOA/Transects_vs_WOA'} ancestors: PreprocessingTask: diag_transect_vs_WOA/thetao order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'K', 'variable_group': 'thetao', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'thetao'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Potential Temperature', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'thetao', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'thetao', 'standard_name': 'sea_water_potential_temperature', 'thresholds': [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], 'timerange': '2001/2004', 'units': 'K', 'variable_group': 'thetao'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/so order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', 'frequency': 'mon', 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'psu', 'variable_group': 'so', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'mon', 'mip': 'Omon', 'short_name': 'so'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', 'frequency': 'mon', 'institute': ['INPE', 'MOHC'], 'long_name': 'Sea Water Salinity', 'mip': 'Omon', 'modeling_realm': ['ocean'], 'original_short_name': 'so', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'so', 'standard_name': 'sea_water_salinity', 'timerange': '2001/2004', 'units': 'psu', 'variable_group': 'so'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/no3 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'no3'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'no3'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Nitrate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'no3', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'no3', 'standard_name': 'mole_concentration_of_nitrate_in_sea_water', 'thresholds': [10.0, 20.0, 30.0], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'no3', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/si order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'si', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'si'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Silicate Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'si', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'si', 'standard_name': 'mole_concentration_of_silicate_in_sea_water', 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'si'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'}} ancestors: None PreprocessingTask: diag_transect_vs_WOA/o2 order: ['fix_file', 'load', 'fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables', 'save', 'cleanup'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2000/2000'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'OBS', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_file': {'alias': 'OBS', 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'fix_metadata': {'alias': 'OBS', 'check_level': , 'dataset': 'WOA', 'diagnostic': 'diag_transect_vs_WOA', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', 'frequency': 'yr', 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'project': 'OBS', 'recipe_dataset_index': 1, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'tier': 2, 'timerange': '2000/2000', 'type': 'clim', 'units': 'mol m-3', 'variable_group': 'o2', 'version': '2013v2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc {'add_fx_variables': {'check_level': , 'fx_variables': {}}, 'cleanup': {'remove': ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed']}, 'climate_statistics': {'operator': 'mean'}, 'clip_timerange': {'timerange': '2001/2004'}, 'cmor_check_data': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'cmor_check_metadata': {'check_level': , 'cmor_table': 'CMIP5', 'frequency': 'yr', 'mip': 'Oyr', 'short_name': 'o2'}, 'concatenate': {}, 'extract_region': {'end_latitude': 89.9, 'end_longitude': 345.0, 'start_latitude': -81.0, 'start_longitude': 320.0}, 'extract_transect': {'longitude': 332.0}, 'fix_data': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_file': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'output_dir': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'fix_metadata': {'alias': 'CMIP5', 'check_level': , 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_transect_vs_WOA', 'ensemble': 'r1i1p1', 'exp': 'historical', 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', 'frequency': 'yr', 'institute': ['INPE', 'MOHC'], 'long_name': 'Dissolved Oxygen Concentration', 'mip': 'Oyr', 'modeling_realm': ['ocnBgchem'], 'original_short_name': 'o2', 'preprocessor': 'prep_transect_AMT', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'o2', 'standard_name': 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', 'thresholds': [0.03], 'timerange': '2001/2004', 'units': 'mol m-3', 'variable_group': 'o2'}, 'load': {'callback': }, 'regrid': {'scheme': 'linear', 'target_grid': '1x1'}, 'remove_fx_variables': {}, 'save': {'compress': False, 'filename': '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'}} ancestors: None 2023-05-09 07:32:31,725 UTC [2798107] INFO esmvalcore._task:747 Running 57 tasks using 8 processes 2023-05-09 07:32:31,811 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/thetao in process [2798262] 2023-05-09 07:32:31,811 UTC [2798263] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/so in process [2798263] 2023-05-09 07:32:31,811 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/no3 in process [2798264] 2023-05-09 07:32:31,812 UTC [2798265] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/o2 in process [2798265] 2023-05-09 07:32:31,812 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/si in process [2798266] 2023-05-09 07:32:31,812 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/chl in process [2798267] 2023-05-09 07:32:31,813 UTC [2798269] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/talk in process [2798269] 2023-05-09 07:32:31,813 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/dfe in process [2798268] 2023-05-09 07:32:31,815 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,816 UTC [2798269] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,815 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:31,816 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,816 UTC [2798269] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:31,816 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,817 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 07:32:31,817 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,817 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 07:32:31,817 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:31,818 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,818 UTC [2798263] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,818 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,818 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 07:32:31,818 UTC [2798265] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,819 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,818 UTC [2798263] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:31,819 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,818 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:31,820 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,820 UTC [2798262] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'volume_statistics', 'remove_fx_variables'] 2023-05-09 07:32:31,818 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:31,820 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 07:32:31,820 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,820 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:31,819 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:31,820 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,821 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,821 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:31,821 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:31,821 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:31,821 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,820 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:31,822 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:31,822 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:31,822 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:31,822 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:31,822 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,822 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:31,822 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:31,822 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 07:32:31,845 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,845 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,845 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,845 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,845 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:31,845 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:31,845 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:31,845 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:31,845 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,845 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,845 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:31,845 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:31,845 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:31,845 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,845 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:31,908 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 49 tasks waiting for ancestors, 0/57 done 2023-05-09 07:32:32,311 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:32,312 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,312 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:32,313 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:32,313 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:32,313 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,313 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:32,313 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,313 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:32,323 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:32,324 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,324 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:32,325 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:32,325 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:32,326 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,326 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:32,326 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:32,326 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:32,335 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:32,335 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:32,337 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:32,337 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:32,337 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:32,337 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:32,379 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:32,379 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:32,379 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:32,383 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:32,383 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:32,383 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:32,386 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,386 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,387 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,407 UTC [2798265] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,407 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,407 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,411 UTC [2798265] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,411 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,411 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,413 UTC [2798265] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,414 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,414 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,415 UTC [2798265] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,416 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,416 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:32,420 UTC [2798265] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,420 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,420 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:32,422 UTC [2798265] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,423 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:32,422 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,422 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:32,423 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:32,423 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:32,424 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:32,424 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:32,424 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:32,425 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:32,425 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:32,425 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:32,425 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:32,425 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:32,425 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:32,428 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:32,428 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:32,428 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:32,429 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:32,429 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:32,429 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:32,429 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:32,429 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:32,430 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:32,430 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:32,430 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:32,430 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:32,430 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:32,430 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:32,430 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:32,431 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:32,431 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:32,431 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:32,431 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:32,431 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:32,431 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:32,432 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:32,432 UTC [2798265] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 07:32:32,432 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:32,432 UTC [2798265] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 07:32:32,432 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:32,432 UTC [2798266] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 07:32:32,432 UTC [2798266] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 07:32:32,432 UTC [2798264] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 07:32:32,432 UTC [2798264] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 07:32:32,432 UTC [2798265] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 07:32:32,432 UTC [2798266] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 07:32:32,432 UTC [2798264] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 07:32:32,744 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:32,746 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,746 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:32,747 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 07:32:32,754 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:32,755 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,755 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:32,756 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:32,756 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 07:32:32,757 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:32,757 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:32,758 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 07:32:32,804 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:32,804 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:32,805 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:32,817 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:32,817 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 07:32:32,820 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:32,820 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 07:32:32,822 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:32,823 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 07:32:33,171 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,171 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:33,174 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:33,177 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:33,179 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:33,179 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:33,180 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:33,231 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:33,232 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:33,236 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:33,237 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:33,237 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:33,238 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:33,238 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:33,239 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:33,239 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,295 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,297 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of dfe. 2023-05-09 07:32:33,297 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:33,307 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:33,307 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:33,307 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:33,307 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:33,307 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 07:32:33,307 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 07:32:33,307 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:33,307 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:33,308 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,308 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:33,308 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 07:32:33,309 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:33,309 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:33,309 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:33,309 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,309 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:33,309 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,309 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:33,310 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:33,310 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,311 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:33,315 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:33,316 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:33,316 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:33,317 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:33,318 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:33,319 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:33,322 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:33,323 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:33,323 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:33,324 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:33,324 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:33,325 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:33,325 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,333 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,334 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of chl. 2023-05-09 07:32:33,334 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:33,372 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:33,372 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:33,375 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:33,378 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:33,379 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:33,379 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:33,380 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:33,381 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:33,382 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:33,385 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:33,386 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_volume_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:33,386 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:33,387 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:33,387 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:33,387 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:33,388 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:33,388 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,396 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:33,397 UTC [2798269] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of talk. 2023-05-09 07:32:33,397 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:33,424 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:33,490 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,071 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:34,071 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,074 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:34,078 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,079 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:34,079 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,080 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:34,081 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,082 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,085 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,086 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:34,087 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,087 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:34,087 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,089 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:34,089 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,096 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:34,096 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,097 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,098 UTC [2798262] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of thetao. 2023-05-09 07:32:34,098 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:34,099 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:34,103 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,104 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:34,104 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,105 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:34,106 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,107 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,110 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,111 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:34,111 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,112 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:34,112 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,113 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:34,113 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,121 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,122 UTC [2798263] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of so. 2023-05-09 07:32:34,122 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:34,168 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:34,169 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,169 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:34,170 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 07:32:34,171 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:34,184 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,187 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:34,187 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 07:32:34,210 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:34,212 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,212 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:34,213 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 07:32:34,214 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:34,215 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,223 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:34,224 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,224 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:34,226 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 07:32:34,226 UTC [2798269] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:34,232 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:34,232 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 07:32:34,246 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:34,246 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 07:32:34,246 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/chl (priority 7) in 0:00:02.433666 2023-05-09 07:32:34,296 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/dfe (priority 8) in 0:00:02.482706 2023-05-09 07:32:34,320 UTC [2798269] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/talk (priority 9) in 0:00:02.507227 2023-05-09 07:32:34,374 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:34,374 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,376 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:34,379 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,380 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,380 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,381 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:34,382 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,383 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,385 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,386 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:34,387 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,387 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:34,388 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,389 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:34,389 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,396 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,398 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of si. 2023-05-09 07:32:34,398 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:34,413 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 49 tasks waiting for ancestors, 2/57 done 2023-05-09 07:32:34,415 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/talk in process [2798267] 2023-05-09 07:32:34,416 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/intpp in process [2798268] 2023-05-09 07:32:34,418 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:34,418 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:34,418 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:34,418 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 07:32:34,418 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:34,419 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:34,419 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed' 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:34,419 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:34,441 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:34,441 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,444 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:34,450 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,453 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,453 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,455 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:34,457 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,458 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,469 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,472 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:34,473 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,475 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:34,475 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,477 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:34,477 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,488 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,493 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,496 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of no3. 2023-05-09 07:32:34,496 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:34,509 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:34,510 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,512 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:34,514 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 47 tasks waiting for ancestors, 3/57 done 2023-05-09 07:32:34,516 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,518 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,518 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,519 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:34,521 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,523 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,536 UTC [2798269] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries in process [2798269] 2023-05-09 07:32:34,537 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,539 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:34,539 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,541 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:34,541 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,543 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:34,544 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,565 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:34,565 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,567 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:34,571 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,572 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:34,572 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,573 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:34,574 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,575 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,578 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,579 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:34,579 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,580 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:34,580 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,581 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'volcello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_volume_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Volume', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'volcello', 'preprocessor': 'prep_timeseries_global_volume_average', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'volcello', 'standard_name': 'ocean_volume', 'timerange': '2001/2004', 'units': 'm3', 'variable_group': 'volcello'}}, check_level = 2023-05-09 07:32:34,581 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,582 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,585 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,586 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of talk and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:34,586 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,590 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/volcello/volcello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,592 UTC [2798265] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added volcello as cell measure in cube of o2. 2023-05-09 07:32:34,592 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:34,593 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,595 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 07:32:34,595 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:34,611 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:34,615 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 46 tasks waiting for ancestors, 3/57 done 2023-05-09 07:32:34,653 UTC [2798269] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml'] 2023-05-09 07:32:34,653 UTC [2798269] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:34,653 UTC [2798269] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 07:32:34,653 UTC [2798269] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 07:32:34,653 UTC [2798269] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries 2023-05-09 07:32:34,653 UTC [2798269] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/log.txt 2023-05-09 07:32:34,653 UTC [2798269] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/settings.yml 2023-05-09 07:32:34,686 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,757 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:34,758 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:34,759 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 07:32:34,773 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:34,774 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:34,774 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:34,775 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 07:32:34,777 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:34,777 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:34,782 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:34,783 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 07:32:34,783 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:34,784 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 07:32:34,784 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:34,785 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_2D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:34,785 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,791 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,792 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of intpp and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 216, 360) 2023-05-09 07:32:34,792 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,797 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:34,798 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of intpp. 2023-05-09 07:32:34,798 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:34,815 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:34,879 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:34,880 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:34,880 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:34,882 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc' 2023-05-09 07:32:34,883 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:35,003 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 07:32:35,003 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:35,014 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:35,046 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,047 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,047 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,049 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 07:32:35,049 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:35,060 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,060 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 07:32:35,065 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,065 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed'] 2023-05-09 07:32:35,068 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/talk (priority 11) in 0:00:00.652645 2023-05-09 07:32:35,073 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/intpp (priority 12) in 0:00:00.657505 2023-05-09 07:32:35,334 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,335 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,335 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,337 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 07:32:35,337 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:35,348 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,349 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 07:32:35,359 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/si (priority 5) in 0:00:03.545924 2023-05-09 07:32:35,375 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 46 tasks waiting for ancestors, 5/57 done 2023-05-09 07:32:35,377 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/chl in process [2798267] 2023-05-09 07:32:35,377 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/areacello in process [2798268] 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:35,380 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,380 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 07:32:35,380 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:35,380 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,381 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 07:32:35,381 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,381 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 07:32:35,381 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,388 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,388 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,389 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:35,389 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,390 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:35,390 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,391 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:35,391 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,392 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_no_obs', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:35,392 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,392 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:35,393 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,393 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:35,393 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,394 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:35,394 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,394 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 07:32:35,395 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:35,407 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,407 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 07:32:35,414 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/areacello (priority 14) in 0:00:00.036842 2023-05-09 07:32:35,430 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,431 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,431 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,432 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 07:32:35,432 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:35,444 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,444 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 07:32:35,454 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/no3 (priority 3) in 0:00:03.642086 2023-05-09 07:32:35,459 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,459 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,460 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:35,463 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,464 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,464 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,465 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:35,466 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,467 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:35,470 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,472 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', thresholds = [0.1, 0.2, 0.5], variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_timeseries_surface_average_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:35,473 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,475 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:35,475 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,476 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 44 tasks waiting for ancestors, 6/57 done 2023-05-09 07:32:35,477 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'thresholds': [0.1, 0.2, 0.5], 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:35,477 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,479 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/thetao in process [2798266] 2023-05-09 07:32:35,488 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,490 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of chl and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:35,490 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:35,490 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,490 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:35,491 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,491 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:35,492 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:35,493 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:35,493 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,494 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,494 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,503 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,506 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 07:32:35,506 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,517 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,517 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,517 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,520 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,552 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,553 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,553 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,555 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 07:32:35,555 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:35,565 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,565 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,565 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,566 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,566 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 07:32:35,576 UTC [2798265] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/o2 (priority 4) in 0:00:03.763330 2023-05-09 07:32:35,578 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 43 tasks waiting for ancestors, 8/57 done 2023-05-09 07:32:35,580 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/so in process [2798268] 2023-05-09 07:32:35,580 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/no3 in process [2798264] 2023-05-09 07:32:35,586 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:35,586 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:35,586 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,587 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 07:32:35,587 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,587 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:35,587 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:35,587 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:35,587 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,587 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:35,588 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 07:32:35,588 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,588 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:35,589 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,611 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,611 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,612 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:35,612 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,613 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:35,614 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:35,617 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,618 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,619 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,619 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,619 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:35,619 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,620 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:35,620 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,620 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:35,621 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:35,621 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,622 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:35,622 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,622 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:35,623 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:35,624 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,625 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:35,626 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,626 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,626 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,626 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:35,627 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,627 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:35,627 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,628 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:35,628 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,628 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:35,628 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,629 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:35,629 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:35,629 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,633 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,634 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of no3 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:35,634 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,632 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:35,634 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,635 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of so and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 07:32:35,635 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,636 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,638 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:35,639 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,640 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,641 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 07:32:35,641 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 07:32:35,641 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,641 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,640 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:35,644 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,646 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:35,647 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,648 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:35,649 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,650 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:35,652 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,653 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:35,653 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,654 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:35,654 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,655 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,655 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:35,655 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,655 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,656 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,659 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:35,660 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:35,661 UTC [2798266] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_potential_temperature / (K) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:35,661 UTC [2798266] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:35,663 UTC [2798266] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_potential_temperature / (K) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,664 UTC [2798266] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 07:32:35,677 UTC [2798266] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:35,678 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,679 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 41 tasks waiting for ancestors, 9/57 done 2023-05-09 07:32:35,679 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:35,679 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,680 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 07:32:35,681 UTC [2798265] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/o2 in process [2798265] 2023-05-09 07:32:35,681 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:35,689 UTC [2798265] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:35,689 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:35,689 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,690 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:35,690 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:35,690 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:35,691 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,691 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,691 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,711 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,711 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,711 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,720 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,721 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 07:32:35,727 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:35,728 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,728 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 07:32:35,728 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,728 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:35,728 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:35,729 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,729 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:35,729 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,744 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:35,744 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,746 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:35,749 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,751 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:35,751 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,752 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:35,753 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,754 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:35,757 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,758 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:35,759 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,759 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:35,759 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,761 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:35,761 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,766 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,766 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of thetao and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 07:32:35,766 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,771 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,772 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:35,772 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 07:32:35,772 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,772 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,776 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:35,779 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,779 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 40 tasks waiting for ancestors, 9/57 done 2023-05-09 07:32:35,781 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:35,785 UTC [2798267] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 07:32:35,785 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:35,786 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,784 UTC [2798265] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:35,788 UTC [2798265] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,791 UTC [2798265] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:35,793 UTC [2798265] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:35,798 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:35,798 UTC [2798265] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,800 UTC [2798265] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:35,802 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,803 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:35,805 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,806 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:35,810 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,811 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:35,812 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,813 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:35,813 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,814 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:35,814 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,815 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,820 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:35,821 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:35,822 UTC [2798265] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:35,822 UTC [2798265] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:35,824 UTC [2798265] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:35,825 UTC [2798265] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 07:32:35,835 UTC [2798265] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:35,836 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,837 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:35,837 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,839 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 07:32:35,839 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,839 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:35,840 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,840 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,842 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 07:32:35,842 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:35,857 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,857 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 07:32:35,868 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/chl (priority 13) in 0:00:00.490723 2023-05-09 07:32:35,894 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:35,894 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 07:32:35,901 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:35,901 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:35,902 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 07:32:35,902 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:35,902 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:35,902 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,917 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:35,918 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:35,920 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:35,924 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:35,926 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,926 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:35,927 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:35,928 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:35,929 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:35,933 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:35,934 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:35,934 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:35,935 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:35,935 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:35,937 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:35,937 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,938 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 07:32:35,938 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:35,946 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,947 UTC [2798265] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of o2 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:35,947 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,952 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:35,953 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:35,954 UTC [2798265] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 07:32:35,955 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:35,968 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:35,980 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 40 tasks waiting for ancestors, 10/57 done 2023-05-09 07:32:35,992 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries in process [2798267] 2023-05-09 07:32:35,994 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:35,995 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:35,995 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:35,996 UTC [2798267] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 07:32:35,996 UTC [2798267] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:35,996 UTC [2798267] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 07:32:35,996 UTC [2798267] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 07:32:35,996 UTC [2798267] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries 2023-05-09 07:32:35,996 UTC [2798267] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/log.txt 2023-05-09 07:32:35,996 UTC [2798267] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/settings.yml 2023-05-09 07:32:35,997 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 07:32:35,997 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:36,011 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,011 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 07:32:36,018 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:36,018 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:36,019 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:36,019 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:36,020 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:36,020 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:36,020 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,020 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,044 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,044 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,044 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,064 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,065 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,065 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,081 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 39 tasks waiting for ancestors, 10/57 done 2023-05-09 07:32:36,112 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:36,113 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:36,118 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:36,167 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:36,171 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:36,175 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:36,181 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:36,184 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:36,186 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:36,193 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:36,195 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:36,197 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:36,198 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:36,199 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:36,200 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:36,204 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:36,205 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:36,205 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:36,206 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:36,206 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:36,207 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:36,207 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:36,208 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:36,212 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:36,213 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:36,214 UTC [2798264] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:36,214 UTC [2798264] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:36,215 UTC [2798264] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:36,217 UTC [2798264] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 07:32:36,228 UTC [2798264] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:36,229 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:36,230 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:36,230 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:36,231 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 07:32:36,231 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:36,301 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,301 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 07:32:36,311 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/no3 (priority 18) in 0:00:00.731296 2023-05-09 07:32:36,473 UTC [2798265] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 07:32:36,473 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:36,483 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 39 tasks waiting for ancestors, 11/57 done 2023-05-09 07:32:36,486 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/si in process [2798264] 2023-05-09 07:32:36,494 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'area_statistics', 'remove_fx_variables'] 2023-05-09 07:32:36,494 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:36,494 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:36,494 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:36,495 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 07:32:36,495 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:36,495 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:36,496 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:36,518 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:36,518 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:36,520 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:36,523 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:36,524 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:36,524 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:36,525 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:36,526 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:36,527 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:36,531 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:36,532 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:36,532 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:36,533 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:36,533 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:36,535 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_timeseries_surface_average_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_Surface_average_timeseries_3D', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:36,535 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,540 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,541 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of si and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:36,541 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,542 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:36,543 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:36,543 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:36,544 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 07:32:36,545 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:36,546 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,548 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 07:32:36,548 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:36,557 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,557 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 07:32:36,564 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:36,567 UTC [2798265] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/o2 (priority 19) in 0:00:00.886324 2023-05-09 07:32:36,584 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 38 tasks waiting for ancestors, 11/57 done 2023-05-09 07:32:36,684 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 38 tasks waiting for ancestors, 12/57 done 2023-05-09 07:32:36,686 UTC [2798265] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/areacello in process [2798265] 2023-05-09 07:32:36,689 UTC [2798265] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 07:32:36,689 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:36,689 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:36,689 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 07:32:36,690 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:36,690 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 07:32:36,690 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,696 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:36,697 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:36,698 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:36,699 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:36,699 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:36,699 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:36,700 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:36,700 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:36,701 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_timeseries_surface_average_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:36,702 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:36,702 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:36,702 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:36,703 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:36,703 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:36,704 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:36,704 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:36,704 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 07:32:36,705 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:36,717 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,717 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 07:32:36,726 UTC [2798265] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/areacello (priority 21) in 0:00:00.039783 2023-05-09 07:32:36,785 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 37 tasks waiting for ancestors, 12/57 done 2023-05-09 07:32:36,833 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 07:32:36,833 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:36,845 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:36,879 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:36,879 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:36,880 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:36,881 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 07:32:36,881 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:36,885 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 37 tasks waiting for ancestors, 13/57 done 2023-05-09 07:32:36,887 UTC [2798265] INFO esmvalcore._task:260 Starting task diag_timeseries_scalars/mfo in process [2798265] 2023-05-09 07:32:36,889 UTC [2798265] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 07:32:36,889 UTC [2798265] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 07:32:36,889 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:36,890 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc' with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed' 2023-05-09 07:32:36,890 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:36,890 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:36,890 UTC [2798265] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 07:32:36,892 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,892 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 07:32:36,895 UTC [2798265] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc 2023-05-09 07:32:36,895 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:36,896 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', check_level = 2023-05-09 07:32:36,897 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:36,897 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:36,897 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:36,897 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:36,897 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:36,898 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:36,898 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,898 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:36,924 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:36,924 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,924 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:36,931 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:36,933 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) 2023-05-09 07:32:36,933 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:36,933 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'mfo', frequency = 'mon', check_level = 2023-05-09 07:32:36,938 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:36,938 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:36,946 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:36,947 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) preprocessor = 'prep_timeseries_scalar', mip = 'Omon', variable_group = 'mfo', short_name = 'mfo', diagnostic = 'diag_timeseries_scalars', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'mfo', standard_name = 'sea_water_transport_across_line', long_name = 'Sea Water Transport', units = 'kg s-1', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc', check_level = 2023-05-09 07:32:36,947 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:36,948 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'mfo', frequency = 'mon', check_level = 2023-05-09 07:32:36,948 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:36,949 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:36,949 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:36,949 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) 2023-05-09 07:32:36,949 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:36,950 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc' 2023-05-09 07:32:36,951 UTC [2798265] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc 2023-05-09 07:32:36,962 UTC [2798265] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:36,962 UTC [2798265] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/mfo/mfo_Omon_HadGEM2-ES_historical_r1i1p1_185912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004_fixed'] 2023-05-09 07:32:36,966 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:36,967 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:36,967 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:36,969 UTC [2798265] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_scalars/mfo (priority 23) in 0:00:00.081882 2023-05-09 07:32:36,986 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 36 tasks waiting for ancestors, 13/57 done 2023-05-09 07:32:37,015 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:37,015 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:37,019 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:37,022 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:37,025 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:37,027 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:37,031 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,034 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:37,035 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:37,040 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,042 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:37,043 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:37,044 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:37,044 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:37,045 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:37,048 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:37,048 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:37,049 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:37,049 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:37,050 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:37,050 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:37,050 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:37,051 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:37,054 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:37,055 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,055 UTC [2798264] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:37,055 UTC [2798264] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:37,056 UTC [2798264] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,057 UTC [2798264] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 07:32:37,066 UTC [2798264] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:37,067 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:37,067 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:37,067 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:37,068 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 07:32:37,069 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:37,086 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 36 tasks waiting for ancestors, 14/57 done 2023-05-09 07:32:37,089 UTC [2798265] INFO esmvalcore._task:260 Starting task diag_timeseries_scalars/Scalar_timeseries in process [2798265] 2023-05-09 07:32:37,091 UTC [2798265] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries/settings.yml'] 2023-05-09 07:32:37,092 UTC [2798265] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:37,092 UTC [2798265] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 07:32:37,092 UTC [2798265] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 07:32:37,092 UTC [2798265] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries 2023-05-09 07:32:37,092 UTC [2798265] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries/log.txt 2023-05-09 07:32:37,092 UTC [2798265] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries/settings.yml 2023-05-09 07:32:37,113 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:37,114 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 07:32:37,124 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/si (priority 20) in 0:00:00.637902 2023-05-09 07:32:37,187 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 35 tasks waiting for ancestors, 14/57 done 2023-05-09 07:32:37,287 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 35 tasks waiting for ancestors, 15/57 done 2023-05-09 07:32:37,289 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/thetao in process [2798264] 2023-05-09 07:32:37,296 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:37,296 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:37,296 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:37,296 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:37,296 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:37,297 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:37,297 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:37,297 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,297 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,310 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,310 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,310 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,323 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,324 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,324 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,336 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:37,336 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:37,339 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:37,343 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:37,346 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:37,349 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:37,353 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,355 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:37,357 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:37,361 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,363 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:37,365 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:37,365 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:37,366 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:37,367 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:37,370 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:37,371 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:37,371 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:37,372 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:37,372 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:37,373 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:37,373 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:37,374 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,375 UTC [2798264] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:37,375 UTC [2798264] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:37,376 UTC [2798264] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:37,377 UTC [2798264] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 07:32:37,388 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 34 tasks waiting for ancestors, 15/57 done 2023-05-09 07:32:37,399 UTC [2798264] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:37,400 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:37,401 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,410 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:37,411 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:37,411 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:37,412 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 07:32:37,413 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:37,489 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:37,489 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 07:32:37,495 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:37,495 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:37,495 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 07:32:37,496 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:37,496 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:37,496 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:37,507 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:37,507 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:37,508 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:37,511 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:37,513 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:37,513 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:37,514 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:37,515 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:37,515 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:37,518 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:37,519 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:37,519 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:37,520 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:37,520 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:37,522 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:37,522 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:37,526 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:37,527 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of thetao and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 07:32:37,527 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:37,532 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:37,533 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 07:32:37,533 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:37,546 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,578 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:37,579 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,602 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:37,603 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:37,603 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:37,604 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 07:32:37,604 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:37,677 UTC [2798268] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 07:32:37,677 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:37,694 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,788 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:37,789 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:37,789 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:37,790 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 07:32:37,791 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:37,806 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:37,806 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 07:32:37,812 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:37,812 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:37,812 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:37,813 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:37,813 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:37,813 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:37,813 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,813 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,850 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,850 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,850 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,866 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of thetao. 2023-05-09 07:32:37,867 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:37,882 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:37,937 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,937 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:37,937 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,973 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:37,974 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:37,974 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:37,975 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 07:32:37,975 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:37,980 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,980 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:37,983 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:37,985 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,986 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,986 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:37,986 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 07:32:37,987 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:37,987 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:37,990 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:37,994 UTC [2798268] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:37,997 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/thetao (priority 16) in 0:00:02.517590 2023-05-09 07:32:37,999 UTC [2798268] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,001 UTC [2798268] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,003 UTC [2798268] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:38,007 UTC [2798268] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,009 UTC [2798268] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,010 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:38,011 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,012 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 07:32:38,012 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:38,013 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:38,015 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:38,016 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_Surface_average_timeseries_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_surface_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:38,017 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:38,018 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,018 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:38,019 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:38,019 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:38,020 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:38,023 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:38,024 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,024 UTC [2798268] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_salinity / (1.0) (time: 1; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:38,024 UTC [2798268] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:38,026 UTC [2798268] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_salinity / (1.0) (time: 1; latitude: 180; longitude: 360) Dimension coordinates: time x - - latitude - x - longitude - - x Scalar coordinates: depth 0.0 meters, bound=(-2.5, 2.5) meters Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,027 UTC [2798268] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 180, 360) 2023-05-09 07:32:38,036 UTC [2798268] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:38,037 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:38,037 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:38,038 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:38,038 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 07:32:38,038 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:38,087 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:38,087 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 07:32:38,098 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/so (priority 17) in 0:00:02.517955 2023-05-09 07:32:38,189 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 34 tasks waiting for ancestors, 16/57 done 2023-05-09 07:32:38,190 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/so in process [2798266] 2023-05-09 07:32:38,192 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:38,192 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 07:32:38,196 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:38,196 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:38,196 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:38,197 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:38,197 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:38,197 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:38,198 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:38,198 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,198 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,203 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/thetao (priority 25) in 0:00:00.913680 2023-05-09 07:32:38,211 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,211 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,211 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,221 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,221 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,221 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,232 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,232 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:38,235 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:38,236 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,237 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,238 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:38,238 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:38,241 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:38,244 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:38,248 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,250 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,252 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:38,256 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,258 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,260 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:38,260 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,261 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 07:32:38,261 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:38,262 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:38,265 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:38,265 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:38,266 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:38,267 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,267 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:38,268 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:38,268 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:38,269 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,269 UTC [2798266] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:38,269 UTC [2798266] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:38,270 UTC [2798266] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: sea_water_salinity / (1.0) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,271 UTC [2798266] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 07:32:38,289 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 33 tasks waiting for ancestors, 17/57 done 2023-05-09 07:32:38,293 UTC [2798266] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:38,294 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:38,294 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,303 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries in process [2798268] 2023-05-09 07:32:38,304 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:38,305 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:38,305 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:38,306 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 07:32:38,307 UTC [2798268] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 07:32:38,307 UTC [2798268] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:38,307 UTC [2798268] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:38,307 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:38,307 UTC [2798268] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:38,307 UTC [2798268] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:38,308 UTC [2798268] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2023-05-09 07:32:38,308 UTC [2798268] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2023-05-09 07:32:38,390 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 32 tasks waiting for ancestors, 18/57 done 2023-05-09 07:32:38,392 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/no3 in process [2798264] 2023-05-09 07:32:38,402 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:38,402 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:38,402 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:38,402 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 07:32:38,403 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:38,403 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:38,403 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:38,405 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:38,406 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 07:32:38,415 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:38,415 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:38,415 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 07:32:38,415 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:38,416 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:38,416 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:38,418 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:38,418 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:38,421 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:38,425 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:38,427 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:38,427 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:38,428 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:38,429 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:38,430 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:38,430 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:38,430 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:38,433 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:38,434 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:38,436 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:38,436 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:38,437 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:38,438 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:38,439 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:38,440 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:38,440 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,441 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:38,441 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:38,442 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,443 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:38,465 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:38,467 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,468 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of no3 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:38,468 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,469 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:38,470 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:38,470 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:38,471 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:38,471 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:38,473 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:38,473 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,474 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,476 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of no3. 2023-05-09 07:32:38,476 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:38,479 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,480 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of so and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (48, 40, 216, 360) 2023-05-09 07:32:38,481 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,487 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:38,489 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of so. 2023-05-09 07:32:38,489 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:38,490 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 31 tasks waiting for ancestors, 18/57 done 2023-05-09 07:32:38,493 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,507 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,535 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:38,536 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,543 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:38,544 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,554 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:38,555 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:38,555 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:38,556 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 07:32:38,557 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:38,566 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:38,567 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:38,567 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:38,568 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 07:32:38,568 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:38,754 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:38,754 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 07:32:38,760 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:38,760 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:38,760 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:38,761 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:38,761 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:38,761 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:38,761 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,761 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,774 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,774 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,774 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,786 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,786 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:38,786 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,801 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:38,801 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:38,805 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:38,808 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:38,811 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:38,814 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:38,818 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,820 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,822 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:38,827 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,829 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:38,830 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:38,831 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:38,832 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:38,832 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:38,835 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:38,836 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:38,836 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:38,837 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:38,837 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:38,838 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:38,838 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:38,839 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,839 UTC [2798264] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:38,839 UTC [2798264] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:38,840 UTC [2798264] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:38,841 UTC [2798264] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 07:32:38,865 UTC [2798264] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:38,865 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:38,866 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:38,875 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:38,876 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:38,876 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:38,877 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 07:32:38,878 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:38,963 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:38,963 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 07:32:38,974 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/no3 (priority 27) in 0:00:00.582184 2023-05-09 07:32:39,051 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:39,051 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 07:32:39,061 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/so (priority 26) in 0:00:00.870907 2023-05-09 07:32:39,091 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 31 tasks waiting for ancestors, 19/57 done 2023-05-09 07:32:39,093 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/o2 in process [2798264] 2023-05-09 07:32:39,099 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:39,100 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:39,100 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:39,100 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:39,100 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:39,101 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:39,101 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:39,101 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,101 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,114 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,114 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,114 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,125 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,125 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,125 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,136 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:39,136 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:39,139 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:39,142 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:39,145 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:39,148 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:39,152 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,154 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:39,156 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:39,160 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,163 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:39,164 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:39,164 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:39,165 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:39,166 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:39,169 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:39,169 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:39,170 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:39,170 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:39,171 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:39,171 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:39,171 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:39,172 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,172 UTC [2798264] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:39,172 UTC [2798264] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:39,173 UTC [2798264] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,174 UTC [2798264] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 07:32:39,192 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 30 tasks waiting for ancestors, 20/57 done 2023-05-09 07:32:39,194 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/si in process [2798266] 2023-05-09 07:32:39,197 UTC [2798264] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:39,198 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:39,199 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:39,200 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,208 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:39,209 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:39,209 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:39,210 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 07:32:39,210 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,211 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:39,210 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:39,212 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:39,215 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:39,216 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:39,216 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:39,217 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:39,218 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:39,219 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:39,221 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:39,222 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:39,222 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:39,223 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:39,223 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:39,225 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:39,225 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,229 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,230 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of si and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:39,230 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,234 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,235 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of si. 2023-05-09 07:32:39,235 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:39,249 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,282 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:39,282 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,292 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 29 tasks waiting for ancestors, 20/57 done 2023-05-09 07:32:39,296 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:39,296 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 07:32:39,299 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:39,300 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:39,300 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:39,301 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 07:32:39,302 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:39,304 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:39,304 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:39,305 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 07:32:39,305 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:39,305 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:39,305 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,320 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,320 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:39,322 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:39,326 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:39,328 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:39,328 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:39,329 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:39,330 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:39,331 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:39,335 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:39,336 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_profile_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:39,336 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:39,337 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:39,337 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:39,339 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'CMIP5', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_vs_WOA', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:39,339 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,346 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,347 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of o2 and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:39,347 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,354 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,356 UTC [2798264] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of o2. 2023-05-09 07:32:39,356 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:39,374 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,418 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:39,419 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,437 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:39,438 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:39,438 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:39,440 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 07:32:39,440 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:39,487 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:39,487 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 07:32:39,493 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:39,493 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:39,493 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:39,494 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:39,494 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:39,494 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:39,494 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,494 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,506 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,506 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,506 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,516 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,517 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:39,517 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,530 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:39,531 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:39,534 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:39,537 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:39,540 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:39,543 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:39,547 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,549 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:39,551 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:39,555 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,557 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:39,559 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:39,559 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:39,560 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:39,561 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:39,563 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:39,564 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_profile_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:39,565 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:39,565 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:39,565 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:39,566 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:39,566 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:39,567 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,567 UTC [2798266] DEBUG esmvalcore.preprocessor._area:260 Cell measure "cell_area" not found in cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360). Check fx_file availability. 2023-05-09 07:32:39,567 UTC [2798266] DEBUG esmvalcore.preprocessor._area:263 Attempting to calculate grid cell area... 2023-05-09 07:32:39,568 UTC [2798266] DEBUG esmvalcore.preprocessor._area:199 Using DEFAULT_SPHERICAL_EARTH_RADIUS. while computing area weights of the following cube: mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:39,570 UTC [2798266] DEBUG esmvalcore.preprocessor._area:289 Calculated grid area shape: (1, 102, 180, 360) 2023-05-09 07:32:39,591 UTC [2798266] DEBUG esmvalcore.preprocessor._area:308 area_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:39,592 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:39,593 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,601 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:39,602 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:39,602 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:39,604 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 07:32:39,604 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:39,647 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:39,647 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 07:32:39,658 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/o2 (priority 28) in 0:00:00.564498 2023-05-09 07:32:39,681 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:39,681 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 07:32:39,691 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/si (priority 29) in 0:00:00.497720 2023-05-09 07:32:39,795 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 29 tasks waiting for ancestors, 22/57 done 2023-05-09 07:32:39,803 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/chl in process [2798266] 2023-05-09 07:32:39,806 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:39,807 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:39,807 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:39,807 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 07:32:39,807 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:39,808 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:39,808 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,811 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_profile_vs_WOA/Global_profile_vs_WOA in process [2798264] 2023-05-09 07:32:39,815 UTC [2798264] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA/settings.yml'] 2023-05-09 07:32:39,816 UTC [2798264] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:39,816 UTC [2798264] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 07:32:39,816 UTC [2798264] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 07:32:39,816 UTC [2798264] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_vs_WOA/Global_profile_vs_WOA 2023-05-09 07:32:39,816 UTC [2798264] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA/log.txt 2023-05-09 07:32:39,816 UTC [2798264] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA/settings.yml 2023-05-09 07:32:39,896 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 27 tasks waiting for ancestors, 22/57 done 2023-05-09 07:32:39,900 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:39,900 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:39,902 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:39,905 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:39,907 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:39,907 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:39,908 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:39,909 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:39,910 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:39,914 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:39,915 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:39,915 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:39,916 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:39,916 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:39,918 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:39,918 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,924 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,924 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of chl and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:39,925 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,930 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:39,932 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of chl. 2023-05-09 07:32:39,932 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:39,968 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:39,989 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:39,992 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:39,993 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:39,994 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 07:32:39,995 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:40,010 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:40,011 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,070 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,070 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 07:32:40,081 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,082 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:40,082 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,083 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 07:32:40,084 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:40,128 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:40,128 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:40,128 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:40,128 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:40,129 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:40,129 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:40,129 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,129 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,143 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,143 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,143 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,161 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,161 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,161 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,175 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,176 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:40,176 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:40,177 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:40,177 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,177 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 07:32:40,178 UTC [2798263] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:40,180 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:40,183 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:40,186 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:40,191 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:40,193 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,193 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 07:32:40,195 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:40,197 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:40,200 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:40,204 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:40,206 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:40,207 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:40,208 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:40,209 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:40,210 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:40,213 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:40,213 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:40,214 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:40,214 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:40,215 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:40,215 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:40,215 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:40,216 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,216 UTC [2798262] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 07:32:40,216 UTC [2798262] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 07:32:40,216 UTC [2798262] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 07:32:40,249 UTC [2798263] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:40,249 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:40,249 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:40,250 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:40,250 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:40,250 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:40,250 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,250 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,264 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,264 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,264 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,275 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,275 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:40,275 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,278 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,278 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 07:32:40,286 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,286 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:40,288 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/chl (priority 31) in 0:00:00.484188 2023-05-09 07:32:40,289 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:40,291 UTC [2798263] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,292 UTC [2798263] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,293 UTC [2798263] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:40,293 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:40,296 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:40,300 UTC [2798263] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:40,304 UTC [2798263] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:40,306 UTC [2798263] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:40,309 UTC [2798263] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:40,313 UTC [2798263] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:40,315 UTC [2798263] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:40,316 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:40,317 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:40,318 UTC [2798263] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 07:32:40,318 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:40,318 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:40,321 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:40,322 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_timeseries_global_volume_average', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_timeseries_volume_average_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:40,323 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:40,324 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:40,324 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:40,325 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:40,325 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step volume_statistics 2023-05-09 07:32:40,325 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'volume_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,325 UTC [2798263] DEBUG esmvalcore.preprocessor._volume:124 Cell measure "ocean_volume" not found in cube. Check fx_file availability. 2023-05-09 07:32:40,325 UTC [2798263] DEBUG esmvalcore.preprocessor._volume:126 Attempting to calculate grid cell volume... 2023-05-09 07:32:40,326 UTC [2798263] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/analysis/cartography.py:394: UserWarning: Using DEFAULT_SPHERICAL_EARTH_RADIUS. 2023-05-09 07:32:40,397 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 27 tasks waiting for ancestors, 23/57 done 2023-05-09 07:32:40,399 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/dfe in process [2798266] 2023-05-09 07:32:40,402 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:40,402 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:40,402 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:40,403 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 07:32:40,403 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:40,403 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:40,403 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:40,492 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,493 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:40,494 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,494 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 07:32:40,494 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:40,498 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 26 tasks waiting for ancestors, 23/57 done 2023-05-09 07:32:40,505 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,505 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 07:32:40,517 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/thetao (priority 1) in 0:00:08.705655 2023-05-09 07:32:40,537 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:40,537 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:40,539 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:40,542 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:40,543 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:40,543 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:40,544 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:40,545 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:40,545 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:40,548 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:40,549 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:40,549 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:40,550 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:40,550 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:40,552 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:40,552 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,556 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,557 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of dfe and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:40,557 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,561 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,563 UTC [2798266] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of dfe. 2023-05-09 07:32:40,563 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:40,576 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,600 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,601 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:40,601 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,602 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 07:32:40,602 UTC [2798263] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:40,609 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:40,610 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,612 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,612 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 07:32:40,622 UTC [2798263] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/so (priority 2) in 0:00:08.810876 2023-05-09 07:32:40,627 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,628 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:40,628 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,629 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 07:32:40,630 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:40,698 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 26 tasks waiting for ancestors, 24/57 done 2023-05-09 07:32:40,700 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/talk in process [2798262] 2023-05-09 07:32:40,702 UTC [2798262] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'area_statistics', 'annual_statistics', 'remove_fx_variables'] 2023-05-09 07:32:40,702 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:40,702 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:40,703 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed' 2023-05-09 07:32:40,703 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:40,703 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:40,703 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:40,762 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:40,763 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:40,764 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:40,767 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:40,768 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:40,768 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:40,769 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:40,770 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:40,771 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:40,774 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:40,774 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_global_profile', mip = 'Oyr', variable_group = 'talk', short_name = 'talk', diagnostic = 'diag_profile_no_obs', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'talk', standard_name = 'sea_water_alkalinity_expressed_as_mole_equivalent', long_name = 'Total Alkalinity', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc', check_level = 2023-05-09 07:32:40,775 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:40,776 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'talk', frequency = 'yr', check_level = 2023-05-09 07:32:40,776 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:40,777 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {'areacella': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Atmosphere Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['atmos', 'land'], 'original_short_name': 'areacella', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacella', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacella'}, 'areacello': {'alias': 'HadGEM2-ES', 'dataset': 'HadGEM2-ES', 'diagnostic': 'diag_profile_no_obs', 'ensemble': 'r0i0p0', 'exp': 'historical', 'filename': '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc', 'frequency': 'fx', 'institute': ['INPE', 'MOHC'], 'long_name': 'Ocean Grid-Cell Area', 'mip': 'fx', 'modeling_realm': ['ocean'], 'original_short_name': 'areacello', 'preprocessor': 'prep_global_profile', 'product': ['output1', 'output2'], 'project': 'CMIP5', 'recipe_dataset_index': 0, 'short_name': 'areacello', 'standard_name': 'cell_area', 'timerange': '2001/2004', 'units': 'm2', 'variable_group': 'areacello'}}, check_level = 2023-05-09 07:32:40,777 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,782 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/atmos/fx/r0i0p0/v20120215/areacella/areacella_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,783 UTC [2798262] DEBUG esmvalcore.preprocessor._ancillary_vars:63 Dimensions of talk and areacella cubes do not match. Discarding use of fx_variable: cannot broadcast shape (145, 192) to shape (4, 40, 216, 360) 2023-05-09 07:32:40,783 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,787 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:40,788 UTC [2798262] DEBUG esmvalcore.preprocessor._ancillary_vars:104 Added areacello as cell measure in cube of talk. 2023-05-09 07:32:40,789 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step area_statistics 2023-05-09 07:32:40,799 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 25 tasks waiting for ancestors, 25/57 done 2023-05-09 07:32:40,805 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'area_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,810 UTC [2798263] INFO esmvalcore._task:260 Starting task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries in process [2798263] 2023-05-09 07:32:40,813 UTC [2798263] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml'] 2023-05-09 07:32:40,813 UTC [2798263] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:40,813 UTC [2798263] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:40,813 UTC [2798263] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:40,813 UTC [2798263] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries 2023-05-09 07:32:40,813 UTC [2798263] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/log.txt 2023-05-09 07:32:40,813 UTC [2798263] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_timeseries.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/settings.yml 2023-05-09 07:32:40,823 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:40,823 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 07:32:40,832 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/dfe (priority 32) in 0:00:00.432409 2023-05-09 07:32:40,839 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step annual_statistics 2023-05-09 07:32:40,840 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'annual_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:40,857 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:40,858 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:40,858 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:40,860 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc' 2023-05-09 07:32:40,860 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:40,899 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 24 tasks waiting for ancestors, 25/57 done 2023-05-09 07:32:41,000 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 24 tasks waiting for ancestors, 26/57 done 2023-05-09 07:32:41,001 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/thetao in process [2798266] 2023-05-09 07:32:41,010 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 07:32:41,010 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:41,010 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:41,010 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 07:32:41,010 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:41,011 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:41,011 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:41,023 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:41,023 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:41,025 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:41,028 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:41,029 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:41,029 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:41,030 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:41,031 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:41,032 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:41,035 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:41,036 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:41,036 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:41,037 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:41,037 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:41,038 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:41,038 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:41,038 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:41,081 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:41,081 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/talk/talk_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004_fixed'] 2023-05-09 07:32:41,092 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/talk (priority 33) in 0:00:00.391672 2023-05-09 07:32:41,100 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 23 tasks waiting for ancestors, 26/57 done 2023-05-09 07:32:41,200 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 23 tasks waiting for ancestors, 27/57 done 2023-05-09 07:32:41,207 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_profile_no_obs/Global_profile_no_obs in process [2798262] 2023-05-09 07:32:41,210 UTC [2798262] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs/settings.yml'] 2023-05-09 07:32:41,210 UTC [2798262] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:41,210 UTC [2798262] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:41,210 UTC [2798262] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:41,210 UTC [2798262] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:41,210 UTC [2798262] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs/log.txt 2023-05-09 07:32:41,210 UTC [2798262] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_profiles.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs/settings.yml 2023-05-09 07:32:41,301 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 22 tasks waiting for ancestors, 27/57 done 2023-05-09 07:32:41,680 UTC [2798269] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:41,681 UTC [2798269] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:41,681 UTC [2798269] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 07:32:41,681 UTC [2798269] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diagnostic_provenance.yml 2023-05-09 07:32:41,707 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,707 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,707 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,707 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30814 2023-05-09 07:32:41,771 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,771 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,771 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,771 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30851 2023-05-09 07:32:41,835 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,835 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,835 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,836 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27637 2023-05-09 07:32:41,892 UTC [2798269] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 07:32:41,896 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,896 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,896 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,896 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30175 2023-05-09 07:32:41,931 UTC [2798269] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 07:32:41,935 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,935 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,935 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,935 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31115 2023-05-09 07:32:41,970 UTC [2798269] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_timeseries_global_volume_average_diag_timeseries_volume_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries is a string but should be a list of strings 2023-05-09 07:32:41,974 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:41,975 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:41,975 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:41,975 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27740 2023-05-09 07:32:42,009 UTC [2798269] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries took 0.3 seconds 2023-05-09 07:32:42,009 UTC [2798269] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_no_obs/Global_Volume_verage_timeseries (priority 6) in 0:00:07.471971 2023-05-09 07:32:42,071 UTC [2798267] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:42,071 UTC [2798267] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:42,071 UTC [2798267] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 07:32:42,072 UTC [2798267] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 07:32:42,096 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,096 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,096 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,096 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28855 2023-05-09 07:32:42,160 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,161 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,161 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,161 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42006 2023-05-09 07:32:42,202 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 22 tasks waiting for ancestors, 28/57 done 2023-05-09 07:32:42,204 UTC [2798269] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/so in process [2798269] 2023-05-09 07:32:42,210 UTC [2798269] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 07:32:42,210 UTC [2798269] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:42,210 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:42,210 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 07:32:42,211 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:42,211 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:42,211 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:42,222 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:42,222 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:42,224 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:42,225 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,225 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,225 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,225 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28416 2023-05-09 07:32:42,227 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:42,228 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:42,228 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:42,229 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:42,230 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:42,231 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:42,234 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:42,234 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:42,235 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:42,236 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:42,236 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:42,236 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:42,236 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:42,237 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:42,281 UTC [2798267] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_prep_global_Surface_average_timeseries_2D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:42,285 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,285 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,285 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,286 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41656 2023-05-09 07:32:42,303 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 21 tasks waiting for ancestors, 28/57 done 2023-05-09 07:32:42,320 UTC [2798267] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:42,324 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,324 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,324 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,324 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27455 2023-05-09 07:32:42,358 UTC [2798267] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_no_obs_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:42,362 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:42,362 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:42,362 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:42,362 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 28636 2023-05-09 07:32:42,396 UTC [2798267] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries took 0.3 seconds 2023-05-09 07:32:42,396 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_no_obs/Global_Volume_Average_timeseries (priority 10) in 0:00:06.403833 2023-05-09 07:32:42,503 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 21 tasks waiting for ancestors, 29/57 done 2023-05-09 07:32:42,505 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/no3 in process [2798267] 2023-05-09 07:32:42,511 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 07:32:42,511 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:42,511 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:42,511 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:42,512 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:42,512 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:42,512 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:42,512 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,512 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,526 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,526 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,526 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,537 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,537 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,537 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,551 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:42,551 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:42,554 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:42,558 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:42,561 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:42,564 UTC [2798267] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:42,569 UTC [2798267] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:42,571 UTC [2798267] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:42,573 UTC [2798267] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:42,577 UTC [2798267] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:42,579 UTC [2798267] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:42,580 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:42,581 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:42,582 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:42,583 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:42,585 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:42,586 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:42,586 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:42,587 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:42,587 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:42,588 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:42,588 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:42,589 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:42,592 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:42,593 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:42,597 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:42,598 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:42,599 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:42,601 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:42,601 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:42,603 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 07:32:42,604 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 20 tasks waiting for ancestors, 29/57 done 2023-05-09 07:32:42,604 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:42,684 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:42,684 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 07:32:42,689 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:42,689 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:42,690 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 07:32:42,690 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:42,690 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:42,690 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:42,704 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:42,704 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:42,706 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:42,708 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:42,709 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:42,709 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:42,710 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:42,711 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:42,712 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:42,714 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:42,715 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:42,715 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:42,716 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:42,716 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:42,717 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:42,717 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:42,718 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:42,820 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:42,821 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:42,852 UTC [2798266] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:42,852 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:42,854 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:42,866 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:42,867 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:42,867 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:42,869 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 07:32:42,870 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:42,882 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:42,882 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 07:32:42,887 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:42,888 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:42,888 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:42,888 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:42,889 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:42,889 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:42,889 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,889 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,902 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,902 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,902 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,913 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,913 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:42,913 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,927 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:42,927 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:42,930 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:42,933 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:42,936 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:42,939 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:42,943 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:42,946 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:42,947 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:42,952 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:42,954 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:42,955 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:42,956 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:42,957 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:42,957 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:42,960 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:42,961 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:42,961 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:42,962 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:42,962 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:42,963 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:42,963 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:42,963 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:42,967 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:42,967 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:42,971 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:42,973 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:42,974 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:42,975 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:42,975 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:42,977 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:42,978 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 07:32:42,978 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:42,978 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:42,993 UTC [2798267] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:42,993 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:42,994 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:43,005 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,007 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:43,007 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,009 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 07:32:43,009 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:43,015 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,015 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 07:32:43,021 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,022 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 07:32:43,025 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/thetao (priority 36) in 0:00:02.023692 2023-05-09 07:32:43,031 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/no3 (priority 38) in 0:00:00.525835 2023-05-09 07:32:43,206 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 20 tasks waiting for ancestors, 31/57 done 2023-05-09 07:32:43,207 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/si in process [2798266] 2023-05-09 07:32:43,208 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/o2 in process [2798267] 2023-05-09 07:32:43,213 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 07:32:43,214 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:43,214 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,214 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:43,214 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:43,214 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:43,215 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,215 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,215 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'regrid', 'remove_fx_variables'] 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:43,216 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:43,226 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,226 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,226 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,232 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:43,232 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,234 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:43,236 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,237 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,237 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,237 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,238 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:43,238 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,239 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:43,239 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:43,240 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:43,243 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,244 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:43,244 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,245 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:43,245 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,246 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,246 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:43,247 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:43,247 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:43,247 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,250 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:43,253 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,256 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:43,259 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:43,263 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:43,265 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:43,267 UTC [2798266] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:43,271 UTC [2798266] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:43,273 UTC [2798266] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:43,274 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,275 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:43,276 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:43,277 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:43,279 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,280 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:43,280 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,281 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:43,281 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,282 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,282 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:43,283 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:43,286 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:43,286 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:43,290 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:43,291 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:43,293 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,294 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:43,294 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,296 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 07:32:43,297 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:43,306 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 18 tasks waiting for ancestors, 31/57 done 2023-05-09 07:32:43,328 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,328 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 07:32:43,338 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:43,338 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,339 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 07:32:43,339 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,339 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:43,339 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:43,350 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:43,350 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,351 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:43,354 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,355 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:43,355 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,356 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:43,357 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:43,358 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:43,360 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,361 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:43,361 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,362 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:43,362 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,363 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,363 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:43,364 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:43,494 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:43,495 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:43,510 UTC [2798267] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:43,510 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:43,511 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:43,522 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,523 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:43,523 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,525 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 07:32:43,526 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:43,538 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,538 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 07:32:43,544 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:43,544 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,544 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:43,545 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:43,545 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:43,545 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,545 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,545 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,560 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,560 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,561 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,574 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,574 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:43,574 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,585 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:43,585 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,589 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:43,592 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,595 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:43,597 UTC [2798267] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:43,603 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:43,601 UTC [2798267] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:43,604 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:43,604 UTC [2798267] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:43,605 UTC [2798267] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:43,610 UTC [2798267] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:43,612 UTC [2798267] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:43,613 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,613 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:43,614 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:43,615 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:43,618 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,618 UTC [2798266] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:43,618 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:43,618 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Oyr', variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:43,619 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,619 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:43,619 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:43,620 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,620 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,620 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:43,621 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:43,624 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:43,625 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:43,629 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:43,630 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:43,630 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,631 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:43,631 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,631 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,633 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:43,633 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,633 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 07:32:43,633 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:43,635 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 07:32:43,635 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:43,646 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,646 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 07:32:43,655 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/si (priority 39) in 0:00:00.447851 2023-05-09 07:32:43,668 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,669 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 07:32:43,679 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/o2 (priority 40) in 0:00:00.471090 2023-05-09 07:32:43,807 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 18 tasks waiting for ancestors, 33/57 done 2023-05-09 07:32:43,809 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/areacello in process [2798266] 2023-05-09 07:32:43,810 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/intpp in process [2798267] 2023-05-09 07:32:43,813 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 07:32:43,813 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:43,813 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 07:32:43,813 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,813 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:43,813 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:43,813 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 07:32:43,813 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed' 2023-05-09 07:32:43,813 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,813 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:43,814 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 07:32:43,814 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:43,814 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:43,814 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:43,822 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:43,822 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,823 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:43,824 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,824 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:43,824 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,825 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:43,825 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,826 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_vs_WOA', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:43,826 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,827 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:43,827 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,827 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,827 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,828 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:43,828 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,828 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 07:32:43,829 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:43,832 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:43,832 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:43,833 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 07:32:43,840 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,841 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 07:32:43,846 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:43,847 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:43,847 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:43,847 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 07:32:43,848 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/areacello (priority 41) in 0:00:00.038303 2023-05-09 07:32:43,849 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:43,850 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:43,854 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:43,855 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'intpp', short_name = 'intpp', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'intpp', standard_name = 'net_primary_mole_productivity_of_carbon_by_phytoplankton', long_name = 'Primary Organic Carbon Production by All Types of Phytoplankton', units = 'mol m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc', check_level = 2023-05-09 07:32:43,855 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:43,856 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'intpp', frequency = 'mon', check_level = 2023-05-09 07:32:43,856 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:43,857 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:43,857 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:43,858 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:43,861 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:43,862 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:43,862 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:43,864 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc' 2023-05-09 07:32:43,865 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc 2023-05-09 07:32:43,908 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 16 tasks waiting for ancestors, 33/57 done 2023-05-09 07:32:43,968 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:43,968 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/intpp/intpp_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/intpp/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_intpp_2001-2004_fixed'] 2023-05-09 07:32:43,976 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/intpp (priority 43) in 0:00:00.166351 2023-05-09 07:32:44,009 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 16 tasks waiting for ancestors, 34/57 done 2023-05-09 07:32:44,010 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/fgco2 in process [2798266] 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed' 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:44,013 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:44,058 UTC [2798266] WARNING py.warnings:109 /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/iris/fileformats/_nc_load_rules/helpers.py:223: UnknownCellMethodWarning: NetCDF variable 'fgco2' contains unknown cell method 'where' 2023-05-09 07:32:44,066 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:44,068 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:44,095 UTC [2798269] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:44,096 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:44,097 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:44,109 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 15 tasks waiting for ancestors, 35/57 done 2023-05-09 07:32:44,109 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:44,110 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/chl in process [2798267] 2023-05-09 07:32:44,110 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:44,111 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:44,112 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:44,113 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:44,113 UTC [2798269] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:44,114 UTC [2798267] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:44,127 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:44,127 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 07:32:44,133 UTC [2798269] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:44,133 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:44,134 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:44,134 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:44,135 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:44,135 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:44,135 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:44,135 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,150 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,150 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:44,150 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,154 UTC [2798267] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:44,154 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:44,156 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:44,159 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:44,160 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:44,160 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:44,161 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:44,162 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:44,162 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:44,163 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,163 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:44,163 UTC [2798269] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,165 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:44,166 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:44,166 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:44,167 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:44,167 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:44,168 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:44,168 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:44,169 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:44,174 UTC [2798269] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,174 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:44,177 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:44,179 UTC [2798269] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,180 UTC [2798269] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,181 UTC [2798269] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:44,181 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:44,184 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:44,189 UTC [2798269] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:44,193 UTC [2798269] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:44,195 UTC [2798269] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:44,198 UTC [2798269] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:44,202 UTC [2798269] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:44,204 UTC [2798269] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:44,205 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:44,206 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:44,207 UTC [2798269] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 07:32:44,207 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:44,208 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:44,209 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 14 tasks waiting for ancestors, 35/57 done 2023-05-09 07:32:44,211 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:44,211 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_surface_map_regrid_3D', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_surface_maps_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:44,213 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:44,213 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:44,214 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:44,214 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:44,214 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:44,215 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:44,218 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:44,219 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:44,225 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:44,226 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:44,228 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:44,229 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:44,229 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:44,230 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 07:32:44,230 UTC [2798269] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:44,286 UTC [2798269] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:44,287 UTC [2798269] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 07:32:44,297 UTC [2798269] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/so (priority 37) in 0:00:02.092823 2023-05-09 07:32:44,327 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:44,327 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:44,328 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', check_level = 2023-05-09 07:32:44,341 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc 2023-05-09 07:32:44,341 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:44,342 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:44,342 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:44,343 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'fgco2', frequency = 'mon', check_level = 2023-05-09 07:32:44,345 UTC [2798266] WARNING esmvalcore.cmor.check:261 There were warnings in variable fgco2: fgco2: attribute positive not present loaded from file 2023-05-09 07:32:44,345 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:44,346 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:44,350 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:44,351 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) preprocessor = 'prep_surface_map_2D', mip = 'Omon', variable_group = 'fgco2', short_name = 'fgco2', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'fgco2', standard_name = 'surface_downward_mass_flux_of_carbon_dioxide_expressed_as_carbon', long_name = 'Surface Downward CO2 Flux', units = 'kg m-2 s-1', modeling_realm = ['ocnBgchem'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc', check_level = 2023-05-09 07:32:44,351 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:44,352 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'fgco2', frequency = 'mon', check_level = 2023-05-09 07:32:44,352 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:44,353 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:44,353 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:44,353 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:44,357 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:44,358 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) 2023-05-09 07:32:44,358 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:44,360 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc' 2023-05-09 07:32:44,360 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc 2023-05-09 07:32:44,410 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 14 tasks waiting for ancestors, 36/57 done 2023-05-09 07:32:44,414 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:44,415 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:44,423 UTC [2798269] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/Global_Ocean_surface_map in process [2798269] 2023-05-09 07:32:44,427 UTC [2798269] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml'] 2023-05-09 07:32:44,427 UTC [2798269] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:44,427 UTC [2798269] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 07:32:44,427 UTC [2798269] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 07:32:44,427 UTC [2798269] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_vs_WOA/Global_Ocean_surface_map 2023-05-09 07:32:44,427 UTC [2798269] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/log.txt 2023-05-09 07:32:44,427 UTC [2798269] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/settings.yml 2023-05-09 07:32:44,429 UTC [2798267] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:44,429 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:44,430 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:44,430 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:44,432 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 07:32:44,433 UTC [2798267] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:44,445 UTC [2798267] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:44,445 UTC [2798267] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 07:32:44,453 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/chl (priority 45) in 0:00:00.342689 2023-05-09 07:32:44,471 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:44,472 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocnBgchem/Omon/r1i1p1/v20110916/fgco2/fgco2_Omon_HadGEM2-ES_historical_r1i1p1_195912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/fgco2/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_fgco2_2001-2004_fixed'] 2023-05-09 07:32:44,479 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/fgco2 (priority 44) in 0:00:00.468864 2023-05-09 07:32:44,510 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 13 tasks waiting for ancestors, 36/57 done 2023-05-09 07:32:44,611 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 13 tasks waiting for ancestors, 38/57 done 2023-05-09 07:32:44,670 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/dfe in process [2798266] 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'extract_levels', 'climate_statistics', 'remove_fx_variables'] 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:44,674 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:44,676 UTC [2798267] INFO esmvalcore._task:260 Starting task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs in process [2798267] 2023-05-09 07:32:44,679 UTC [2798267] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml'] 2023-05-09 07:32:44,679 UTC [2798267] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:44,680 UTC [2798267] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 07:32:44,680 UTC [2798267] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 07:32:44,680 UTC [2798267] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs 2023-05-09 07:32:44,680 UTC [2798267] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/log.txt 2023-05-09 07:32:44,680 UTC [2798267] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_model_vs_obs.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/settings.yml 2023-05-09 07:32:44,696 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:44,696 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:44,698 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:44,701 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:44,702 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:44,702 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:44,703 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:44,704 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:44,705 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:44,707 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:44,708 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_surface_map_3D', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_surface_maps_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:44,708 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:44,709 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:44,709 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:44,710 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:44,710 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_levels 2023-05-09 07:32:44,711 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_levels' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) levels = [0.0], scheme = 'linear_extrapolate' 2023-05-09 07:32:44,711 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 11 tasks waiting for ancestors, 38/57 done 2023-05-09 07:32:45,035 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:45,036 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:45,050 UTC [2798266] DEBUG esmvalcore.preprocessor._time:764 climate_statistics changed dtype from float32 to float64, changing back 2023-05-09 07:32:45,050 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:45,051 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:45,051 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:45,053 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 07:32:45,054 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:45,066 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:45,066 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 07:32:45,074 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/dfe (priority 46) in 0:00:00.404063 2023-05-09 07:32:45,224 UTC [2798262] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:45,225 UTC [2798262] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:45,225 UTC [2798262] DEBUG esmvalcore._task:590 Script ocean/diagnostic_profiles.py completed successfully 2023-05-09 07:32:45,225 UTC [2798262] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_no_obs/Global_profile_no_obs/diagnostic_provenance.yml 2023-05-09 07:32:45,232 UTC [2798262] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:45,243 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,243 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,243 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,244 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 34184 2023-05-09 07:32:45,264 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 11 tasks waiting for ancestors, 39/57 done 2023-05-09 07:32:45,265 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/areacello in process [2798266] 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'remove_fx_variables'] 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed' 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc' with function argument(s) callback = 2023-05-09 07:32:45,268 UTC [2798266] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:45,273 UTC [2798266] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc 2023-05-09 07:32:45,273 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:45,274 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:45,275 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:45,275 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:45,275 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:45,276 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:45,276 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:45,277 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) mip = 'fx', variable_group = 'areacello', short_name = 'areacello', diagnostic = 'diag_surface_maps_no_data', preprocessor = 'default', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Ocean Grid-Cell Area', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc', check_level = 2023-05-09 07:32:45,277 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:45,278 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'fx', short_name = 'areacello', frequency = 'fx', check_level = 2023-05-09 07:32:45,278 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:45,278 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:45,279 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:45,279 UTC [2798262] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:45,279 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) 2023-05-09 07:32:45,279 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:45,280 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc' 2023-05-09 07:32:45,280 UTC [2798266] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc 2023-05-09 07:32:45,285 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,285 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,286 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,286 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 35309 2023-05-09 07:32:45,290 UTC [2798266] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:45,290 UTC [2798266] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/fx/ocean/fx/r0i0p0/v20130612/areacello/areacello_fx_HadGEM2-ES_historical_r0i0p0.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_surface_maps_no_data/areacello/CMIP5_HadGEM2-ES_fx_historical_r1i1p1_areacello_fixed'] 2023-05-09 07:32:45,296 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/areacello (priority 47) in 0:00:00.030585 2023-05-09 07:32:45,321 UTC [2798262] WARNING esmvalcore._task:663 Invalid ancestor file specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_profile_no_obs/Global_profile_no_obs/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_prep_global_profile_diag_profile_no_obs_2001_2004_profile.png, created by diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs 2023-05-09 07:32:45,328 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,328 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,328 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,328 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 34232 2023-05-09 07:32:45,347 UTC [2798268] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 07:32:45,347 UTC [2798268] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 07:32:45,363 UTC [2798262] WARNING esmvalcore._task:680 Valid ancestor files for diagnostic script ocean/diagnostic_profiles.py in task diag_profile_no_obs/Global_profile_no_obs are: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_profile_no_obs/talk/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_talk_2001-2004.nc 2023-05-09 07:32:45,363 UTC [2798262] DEBUG esmvalcore._task:684 Collecting provenance of task diag_profile_no_obs/Global_profile_no_obs took 0.1 seconds 2023-05-09 07:32:45,363 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_profile_no_obs/Global_profile_no_obs (priority 30) in 0:00:04.156500 2023-05-09 07:32:45,365 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 10 tasks waiting for ancestors, 39/57 done 2023-05-09 07:32:45,396 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,396 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,396 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,396 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 25417 2023-05-09 07:32:45,460 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,460 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,461 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,461 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37856 2023-05-09 07:32:45,465 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 10 tasks waiting for ancestors, 40/57 done 2023-05-09 07:32:45,473 UTC [2798266] INFO esmvalcore._task:260 Starting task diag_surface_maps_no_data/Global_Ocean_surface_map in process [2798266] 2023-05-09 07:32:45,476 UTC [2798266] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml'] 2023-05-09 07:32:45,477 UTC [2798266] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:45,477 UTC [2798266] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 07:32:45,477 UTC [2798266] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 07:32:45,477 UTC [2798266] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_surface_maps_no_data/Global_Ocean_surface_map 2023-05-09 07:32:45,477 UTC [2798266] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map/log.txt 2023-05-09 07:32:45,477 UTC [2798266] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map/settings.yml 2023-05-09 07:32:45,532 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,532 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,532 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,532 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18271 2023-05-09 07:32:45,565 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 9 tasks waiting for ancestors, 41/57 done 2023-05-09 07:32:45,567 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/thetao in process [2798262] 2023-05-09 07:32:45,576 UTC [2798262] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:45,576 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:45,576 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:45,576 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed' 2023-05-09 07:32:45,576 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:45,577 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:45,577 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:45,592 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:45,592 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:45,595 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:45,599 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:45,601 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:45,602 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:45,603 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:45,603 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,604 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,604 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,604 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18112 2023-05-09 07:32:45,604 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:45,605 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:45,609 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:45,611 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc', check_level = 2023-05-09 07:32:45,611 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:45,612 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:45,613 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:45,614 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:45,614 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:45,615 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:45,621 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:45,623 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:45,632 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:45,634 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:45,666 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 8 tasks waiting for ancestors, 41/57 done 2023-05-09 07:32:45,668 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:45,669 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:45,672 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:45,673 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:45,673 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:45,676 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc' 2023-05-09 07:32:45,676 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc 2023-05-09 07:32:45,703 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,703 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,704 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,704 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 52178 2023-05-09 07:32:45,763 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,768 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,768 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,768 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,768 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39563 2023-05-09 07:32:45,803 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,807 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,807 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,807 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,807 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42312 2023-05-09 07:32:45,842 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,847 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,847 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,847 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,847 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31450 2023-05-09 07:32:45,867 UTC [2798264] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:45,867 UTC [2798264] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:45,868 UTC [2798264] DEBUG esmvalcore._task:590 Script ocean/diagnostic_profiles.py completed successfully 2023-05-09 07:32:45,868 UTC [2798264] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_profile_vs_WOA/Global_profile_vs_WOA/diagnostic_provenance.yml 2023-05-09 07:32:45,882 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,886 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,886 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,886 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,886 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 32415 2023-05-09 07:32:45,908 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,909 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,909 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,909 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 24672 2023-05-09 07:32:45,921 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,925 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,926 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,926 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,926 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27636 2023-05-09 07:32:45,955 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,956 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,956 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,956 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37063 2023-05-09 07:32:45,960 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_so_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,965 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,965 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,965 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,965 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 13787 2023-05-09 07:32:45,994 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_thetao_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:45,998 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:45,998 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:45,998 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:45,998 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19348 2023-05-09 07:32:46,004 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,004 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,005 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,005 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37253 2023-05-09 07:32:46,030 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_no3_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:46,034 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,034 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,034 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,034 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15284 2023-05-09 07:32:46,052 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,052 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,052 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,052 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 45866 2023-05-09 07:32:46,065 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_o2_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:46,070 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,070 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,070 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,070 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 17033 2023-05-09 07:32:46,100 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,100 UTC [2798268] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_surface_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_si_prep_global_Surface_average_timeseries_3D_diag_timeseries_surface_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:46,100 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,100 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,100 UTC [2798264] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39620 2023-05-09 07:32:46,105 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:46,105 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:46,105 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:46,105 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 16557 2023-05-09 07:32:46,135 UTC [2798268] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries took 0.8 seconds 2023-05-09 07:32:46,135 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_surface_average_vs_WOA/Global_Volume_Average_timeseries (priority 15) in 0:00:07.832438 2023-05-09 07:32:46,137 UTC [2798264] DEBUG esmvalcore._task:684 Collecting provenance of task diag_profile_vs_WOA/Global_profile_vs_WOA took 0.3 seconds 2023-05-09 07:32:46,137 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_profile_vs_WOA/Global_profile_vs_WOA (priority 24) in 0:00:06.325693 2023-05-09 07:32:46,266 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 8 tasks waiting for ancestors, 43/57 done 2023-05-09 07:32:46,268 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/so in process [2798268] 2023-05-09 07:32:46,269 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/no3 in process [2798264] 2023-05-09 07:32:46,274 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:46,274 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:46,274 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:46,275 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed' 2023-05-09 07:32:46,275 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:46,275 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc' with function argument(s) callback = 2023-05-09 07:32:46,275 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:46,276 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:46,276 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:46,276 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:46,277 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:46,277 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:46,278 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed' 2023-05-09 07:32:46,278 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:46,278 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,278 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,291 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,291 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,291 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,292 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc 2023-05-09 07:32:46,292 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:46,294 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:46,297 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:46,299 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:46,299 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:46,300 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:46,301 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:46,301 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:46,302 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,302 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,302 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,305 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:46,306 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc', check_level = 2023-05-09 07:32:46,306 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:46,307 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:46,307 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:46,308 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:46,308 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:46,309 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:46,313 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc 2023-05-09 07:32:46,313 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:46,314 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:46,315 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:46,316 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:46,320 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:46,322 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:46,323 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:46,323 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:46,327 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:46,326 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:46,328 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:46,330 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:46,331 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) 2023-05-09 07:32:46,331 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:46,330 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:46,332 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc' 2023-05-09 07:32:46,332 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:46,333 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc 2023-05-09 07:32:46,334 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:46,338 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:46,340 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_nitrate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:46,341 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:46,342 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:46,343 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:46,344 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:46,346 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:46,347 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc', check_level = 2023-05-09 07:32:46,347 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:46,348 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:46,348 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:46,349 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:46,349 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:46,350 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:46,354 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:46,355 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:46,361 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:46,363 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:46,367 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:46,367 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 6 tasks waiting for ancestors, 43/57 done 2023-05-09 07:32:46,368 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:46,370 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:46,371 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:46,371 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:46,373 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc' 2023-05-09 07:32:46,374 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc 2023-05-09 07:32:46,847 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:46,847 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/thetao/thetao_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004_fixed'] 2023-05-09 07:32:46,854 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:46,854 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:46,854 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:46,855 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:46,855 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed' 2023-05-09 07:32:46,855 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:46,855 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,855 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,872 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,872 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,872 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,884 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,884 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:46,884 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,895 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc 2023-05-09 07:32:46,895 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:46,898 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:46,901 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:46,904 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:46,907 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:46,911 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:46,913 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:46,915 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:46,919 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:46,922 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_potential_temperature / (K) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:46,923 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:46,923 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:46,924 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:46,925 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:46,928 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:46,929 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', thresholds = [0.0, 5.0, 10.0, 15.0, 20.0, 25.0, 30.0], variable_group = 'thetao', short_name = 'thetao', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'thetao', standard_name = 'sea_water_potential_temperature', long_name = 'Sea Water Potential Temperature', units = 'K', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc', check_level = 2023-05-09 07:32:46,929 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:46,930 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'thetao', frequency = 'mon', check_level = 2023-05-09 07:32:46,930 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:46,930 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:46,930 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:46,931 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:46,935 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:46,937 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:46,943 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:46,944 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:46,948 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:46,949 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:46,951 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:46,952 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:46,952 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:46,955 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc' 2023-05-09 07:32:46,955 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc 2023-05-09 07:32:47,165 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:47,165 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_no3_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000_fixed'] 2023-05-09 07:32:47,171 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:47,172 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:47,172 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed' 2023-05-09 07:32:47,172 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:47,172 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:47,172 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:47,187 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:47,187 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:47,188 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:47,191 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:47,192 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:47,192 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:47,193 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:47,194 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:47,195 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:47,198 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:47,198 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [10.0, 20.0, 30.0], variable_group = 'no3', short_name = 'no3', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'no3', standard_name = 'mole_concentration_of_nitrate_in_sea_water', long_name = 'Dissolved Nitrate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc', check_level = 2023-05-09 07:32:47,199 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:47,199 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'no3', frequency = 'yr', check_level = 2023-05-09 07:32:47,200 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:47,200 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:47,200 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:47,201 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:47,205 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:47,206 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:47,213 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:47,214 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:47,218 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:47,219 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:47,221 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:47,222 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:47,222 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:47,224 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc' 2023-05-09 07:32:47,224 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc 2023-05-09 07:32:47,439 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:47,440 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/mon/ocean/Omon/r1i1p1/latest/so/so_Omon_HadGEM2-ES_historical_r1i1p1_199912-200512.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004_fixed'] 2023-05-09 07:32:47,445 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:47,445 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:47,446 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:47,446 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:47,446 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed' 2023-05-09 07:32:47,447 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:47,447 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,447 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,459 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,459 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,459 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,474 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,474 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,474 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,485 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,486 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:47,489 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:47,490 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,491 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,492 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc 2023-05-09 07:32:47,492 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:47,495 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:47,498 UTC [2798268] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:47,502 UTC [2798268] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:47,504 UTC [2798268] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:47,506 UTC [2798268] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:47,510 UTC [2798268] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:47,513 UTC [2798268] DEBUG esmvalcore.preprocessor._io:459 Cube sea_water_salinity / (0.001) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Omon' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:47,514 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:47,514 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:47,515 UTC [2798268] WARNING esmvalcore.cmor.check:261 There were warnings in variable so: Variable so units 0.001 will be converted to psu loaded from file 2023-05-09 07:32:47,515 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:47,516 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:47,518 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:47,518 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_thetao_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000_fixed'] 2023-05-09 07:32:47,519 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:47,520 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Omon', variable_group = 'so', short_name = 'so', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'so', standard_name = 'sea_water_salinity', long_name = 'Sea Water Salinity', units = 'psu', modeling_realm = ['ocean'], frequency = 'mon', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc', check_level = 2023-05-09 07:32:47,521 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:47,521 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Omon', short_name = 'so', frequency = 'mon', check_level = 2023-05-09 07:32:47,521 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:47,522 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:47,522 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:47,523 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:47,527 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:47,528 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:47,529 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/thetao (priority 49) in 0:00:01.961540 2023-05-09 07:32:47,534 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:47,536 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:47,539 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:47,541 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:47,542 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:47,544 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:47,544 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:47,545 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc' 2023-05-09 07:32:47,545 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc 2023-05-09 07:32:47,634 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:47,634 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/no3/no3_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004_fixed'] 2023-05-09 07:32:47,644 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/no3 (priority 51) in 0:00:01.375218 2023-05-09 07:32:47,669 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 6 tasks waiting for ancestors, 44/57 done 2023-05-09 07:32:47,671 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/si in process [2798262] 2023-05-09 07:32:47,678 UTC [2798262] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:47,679 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:47,679 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:47,679 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:47,679 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:47,680 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed' 2023-05-09 07:32:47,680 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:47,680 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,680 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,693 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,693 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,693 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,707 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,708 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:47,708 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,722 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc 2023-05-09 07:32:47,722 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:47,725 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:47,729 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:47,732 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:47,735 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:47,739 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:47,741 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:47,743 UTC [2798262] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:47,747 UTC [2798262] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:47,750 UTC [2798262] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_silicate_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:47,751 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:47,751 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:47,752 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:47,753 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:47,763 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:47,764 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc', check_level = 2023-05-09 07:32:47,764 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:47,765 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:47,765 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:47,766 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:47,766 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:47,767 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:47,770 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 5 tasks waiting for ancestors, 45/57 done 2023-05-09 07:32:47,771 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:47,771 UTC [2798264] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/o2 in process [2798264] 2023-05-09 07:32:47,772 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:47,777 UTC [2798264] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:47,777 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:47,777 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:47,778 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed' 2023-05-09 07:32:47,778 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:47,778 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:47,778 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:47,778 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:47,780 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:47,784 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:47,785 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:47,787 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:47,788 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:47,788 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:47,789 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:47,789 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:47,790 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc' 2023-05-09 07:32:47,791 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:47,791 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc 2023-05-09 07:32:47,794 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:47,795 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:47,795 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:47,796 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:47,797 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:47,797 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:47,800 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:47,801 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc', check_level = 2023-05-09 07:32:47,801 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:47,802 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:47,802 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:47,803 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:47,803 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:47,804 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:47,808 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:47,809 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:47,815 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:47,816 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:47,820 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:47,821 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:47,823 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:47,824 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:47,824 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:47,826 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc' 2023-05-09 07:32:47,827 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc 2023-05-09 07:32:47,870 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 4 tasks waiting for ancestors, 45/57 done 2023-05-09 07:32:47,872 UTC [2798263] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:47,873 UTC [2798263] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:47,873 UTC [2798263] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 07:32:47,873 UTC [2798263] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diagnostic_provenance.yml 2023-05-09 07:32:47,921 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:47,921 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:47,921 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:47,921 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 22113 2023-05-09 07:32:47,983 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:47,983 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:47,983 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:47,983 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 23110 2023-05-09 07:32:48,045 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,045 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,045 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,045 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18944 2023-05-09 07:32:48,106 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,107 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,107 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,107 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 16710 2023-05-09 07:32:48,108 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,108 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Omon_so_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000_fixed'] 2023-05-09 07:32:48,118 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/so (priority 50) in 0:00:01.849996 2023-05-09 07:32:48,127 UTC [2798265] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:48,127 UTC [2798265] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:48,127 UTC [2798265] DEBUG esmvalcore._task:590 Script ocean/diagnostic_timeseries.py completed successfully 2023-05-09 07:32:48,128 UTC [2798265] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_timeseries_scalars/Scalar_timeseries/diagnostic_provenance.yml 2023-05-09 07:32:48,167 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,167 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,167 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,167 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 22936 2023-05-09 07:32:48,200 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,200 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,200 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,200 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 43624 2023-05-09 07:32:48,216 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_so_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,221 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,221 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,221 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,221 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37587 2023-05-09 07:32:48,231 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,231 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/o2/o2_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004_fixed'] 2023-05-09 07:32:48,238 UTC [2798264] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:48,238 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:48,239 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:48,239 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:48,240 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed' 2023-05-09 07:32:48,240 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:48,240 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:48,240 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,255 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_thetao_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,256 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,256 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:48,256 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,259 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,260 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,260 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,260 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42158 2023-05-09 07:32:48,262 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,262 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,262 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,262 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41188 2023-05-09 07:32:48,270 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,270 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc' with function argument(s) callback = 2023-05-09 07:32:48,270 UTC [2798264] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,271 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 4 tasks waiting for ancestors, 46/57 done 2023-05-09 07:32:48,272 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_transect_no_data/chl in process [2798268] 2023-05-09 07:32:48,275 UTC [2798268] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:48,275 UTC [2798268] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:48,275 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:48,275 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed' 2023-05-09 07:32:48,276 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:48,276 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:48,276 UTC [2798268] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,281 UTC [2798264] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc 2023-05-09 07:32:48,281 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:48,285 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:48,288 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:48,288 UTC [2798268] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,288 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:48,289 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:48,291 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [, , ] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:48,292 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:48,293 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,293 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:48,294 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:48,295 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:48,293 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:48,296 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:48,297 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_no3_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,299 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:48,300 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'chl', short_name = 'chl', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'chl', standard_name = 'mass_concentration_of_phytoplankton_expressed_as_chlorophyll_in_sea_water', long_name = 'Total Chlorophyll Mass Concentration', units = 'kg m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc', check_level = 2023-05-09 07:32:48,298 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:48,300 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:48,301 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'chl', frequency = 'yr', check_level = 2023-05-09 07:32:48,300 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:48,301 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:48,301 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,301 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,301 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,301 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31936 2023-05-09 07:32:48,302 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:48,302 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:48,302 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:48,302 UTC [2798264] DEBUG esmvalcore.preprocessor._io:431 Will attempt to concatenate cubes mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' and mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' in this order 2023-05-09 07:32:48,306 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:48,308 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:48,306 UTC [2798264] DEBUG esmvalcore.preprocessor._io:456 Both cubes start at the same time but cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' ends before mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' 2023-05-09 07:32:48,308 UTC [2798264] DEBUG esmvalcore.preprocessor._io:459 Cube mole_concentration_of_dissolved_molecular_oxygen_in_sea_water / (mol m-3) (time: 1; depth: 102; latitude: 180; longitude: 360) Dimension coordinates: time x - - - depth - x - - latitude - - x - longitude - - - x Cell methods: mean area mean depth mean time Attributes: Conventions 'CF-1.5' host 'unknown host' mip 'Oyr' modeling_realm 'clim' project_id 'CMIP5' reference 'Locarnini et al., World Ocean Atlas 2013, Vol. 1: Temperature, 2013.' source 'https://data.nodc.noaa.gov/woa/WOA13/DATAv2/' tier '2' title 'WOA data reformatted for ESMValTool v2.0a2' user 'hca063' version '2013v2' contains all needed data so using it fully 2023-05-09 07:32:48,309 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:48,310 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:48,311 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:48,311 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) timerange = '2000/2000' 2023-05-09 07:32:48,314 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:48,314 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:48,315 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', thresholds = [0.03], variable_group = 'o2', short_name = 'o2', diagnostic = 'diag_transect_vs_WOA', dataset = 'WOA', project = 'OBS', type = 'clim', version = '2013v2', tier = 2, recipe_dataset_index = 1, timerange = '2000/2000', alias = 'OBS', original_short_name = 'o2', standard_name = 'mole_concentration_of_dissolved_molecular_oxygen_in_sea_water', long_name = 'Dissolved Oxygen Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc', check_level = 2023-05-09 07:32:48,315 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:48,315 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:48,316 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) cmor_table = 'OBS', mip = 'Oyr', short_name = 'o2', frequency = 'yr', check_level = 2023-05-09 07:32:48,316 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:48,317 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:48,317 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:48,317 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:48,319 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:48,320 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:48,321 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:48,322 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:48,323 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:48,323 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,323 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:48,323 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,323 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,323 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,323 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41685 2023-05-09 07:32:48,325 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc' 2023-05-09 07:32:48,326 UTC [2798268] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc 2023-05-09 07:32:48,329 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:48,330 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:48,334 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:48,335 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:48,336 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_o2_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,337 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:48,338 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) 2023-05-09 07:32:48,338 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:48,340 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,340 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,340 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,340 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 30622 2023-05-09 07:32:48,340 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc' 2023-05-09 07:32:48,341 UTC [2798264] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc 2023-05-09 07:32:48,351 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,352 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_si_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000_fixed'] 2023-05-09 07:32:48,358 UTC [2798262] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:48,358 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:48,358 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed' 2023-05-09 07:32:48,359 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:48,359 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:48,359 UTC [2798262] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,369 UTC [2798262] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,369 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:48,371 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:48,371 UTC [2798107] INFO esmvalcore._task:779 Progress: 8 tasks running, 3 tasks waiting for ancestors, 46/57 done 2023-05-09 07:32:48,373 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:48,375 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,375 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:48,375 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,375 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:48,376 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:48,377 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:48,379 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,379 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,379 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,380 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 32180 2023-05-09 07:32:48,380 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:48,381 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'si', short_name = 'si', diagnostic = 'diag_transect_vs_WOA', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'CMIP5', original_short_name = 'si', standard_name = 'mole_concentration_of_silicate_in_sea_water', long_name = 'Dissolved Silicate Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc', check_level = 2023-05-09 07:32:48,381 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:48,382 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'si', frequency = 'yr', check_level = 2023-05-09 07:32:48,382 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:48,383 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:48,383 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:48,383 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:48,385 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,385 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,385 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,385 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 40184 2023-05-09 07:32:48,388 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:48,389 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:48,395 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:48,396 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:48,400 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:48,401 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:48,403 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:48,404 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,404 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:48,406 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc' 2023-05-09 07:32:48,406 UTC [2798262] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc 2023-05-09 07:32:48,414 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/so/OBS_WOA_clim_2013v2_Omon_so_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_so_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,420 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,420 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,420 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,420 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 13787 2023-05-09 07:32:48,446 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,446 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,446 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,446 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 43355 2023-05-09 07:32:48,450 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/thetao/OBS_WOA_clim_2013v2_Omon_thetao_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Omon_thetao_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,454 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,454 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,454 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,454 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18713 2023-05-09 07:32:48,484 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/no3/OBS_WOA_clim_2013v2_Oyr_no3_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_no3_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,489 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,489 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,489 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,489 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 17862 2023-05-09 07:32:48,516 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,517 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,517 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,517 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18386 2023-05-09 07:32:48,519 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_o2_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,523 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,523 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,523 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,523 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19912 2023-05-09 07:32:48,554 UTC [2798263] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_volume_average_vs_WOA/si/OBS_WOA_clim_2013v2_Oyr_si_2000-2000.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries/diag_OBS_WOA_Oyr_si_prep_timeseries_global_volume_average_diag_timeseries_volume_average_vs_WOA_2000_2000_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries is a string but should be a list of strings 2023-05-09 07:32:48,558 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,558 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,558 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,558 UTC [2798263] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 15924 2023-05-09 07:32:48,568 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,568 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,568 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,568 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 40976 2023-05-09 07:32:48,588 UTC [2798263] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries took 0.7 seconds 2023-05-09 07:32:48,588 UTC [2798263] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_volume_average_vs_WOA/Global_Volume_Average_timeseries (priority 0) in 0:00:07.778159 2023-05-09 07:32:48,629 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,629 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,629 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,629 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18922 2023-05-09 07:32:48,680 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,680 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,680 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,680 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39801 2023-05-09 07:32:48,719 UTC [2798268] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,720 UTC [2798268] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/chl/chl_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/chl/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_chl_2001-2004_fixed'] 2023-05-09 07:32:48,728 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/chl (priority 55) in 0:00:00.454904 2023-05-09 07:32:48,741 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,741 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,741 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,741 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 36796 2023-05-09 07:32:48,772 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 3 tasks waiting for ancestors, 47/57 done 2023-05-09 07:32:48,773 UTC [2798263] INFO esmvalcore._task:260 Starting task diag_transect_no_data/dfe in process [2798263] 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:600 Running block ['fix_metadata', 'concatenate', 'cmor_check_metadata', 'clip_timerange', 'fix_data', 'cmor_check_data', 'add_fx_variables', 'climate_statistics', 'extract_region', 'regrid', 'extract_transect', 'remove_fx_variables'] 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:607 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_file 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_file' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', output_dir = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed' 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step load 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'load' on the data '/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc' with function argument(s) callback = 2023-05-09 07:32:48,777 UTC [2798263] DEBUG esmvalcore.preprocessor._io:138 Loading: /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,797 UTC [2798263] DEBUG esmvalcore.preprocessor._io:168 Done with loading /projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc 2023-05-09 07:32:48,797 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_metadata 2023-05-09 07:32:48,798 UTC [2798262] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,798 UTC [2798262] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/si/si_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/si/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_si_2001-2004_fixed'] 2023-05-09 07:32:48,799 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:48,801 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step concatenate 2023-05-09 07:32:48,802 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,802 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,802 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,802 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_metadata 2023-05-09 07:32:48,803 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,803 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41634 2023-05-09 07:32:48,803 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:48,804 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step clip_timerange 2023-05-09 07:32:48,805 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) timerange = '2001/2004' 2023-05-09 07:32:48,808 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step fix_data 2023-05-09 07:32:48,808 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/si (priority 52) in 0:00:01.136615 2023-05-09 07:32:48,808 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'fix_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) preprocessor = 'prep_transect_AMT', mip = 'Oyr', variable_group = 'dfe', short_name = 'dfe', diagnostic = 'diag_transect_no_data', dataset = 'HadGEM2-ES', project = 'CMIP5', exp = 'historical', ensemble = 'r1i1p1', recipe_dataset_index = 0, institute = ['INPE', 'MOHC'], product = ['output1', 'output2'], timerange = '2001/2004', alias = 'HadGEM2-ES', original_short_name = 'dfe', standard_name = 'mole_concentration_of_dissolved_iron_in_sea_water', long_name = 'Dissolved Iron Concentration', units = 'mol m-3', modeling_realm = ['ocnBgchem'], frequency = 'yr', filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc', check_level = 2023-05-09 07:32:48,809 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cmor_check_data 2023-05-09 07:32:48,810 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) cmor_table = 'CMIP5', mip = 'Oyr', short_name = 'dfe', frequency = 'yr', check_level = 2023-05-09 07:32:48,810 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step add_fx_variables 2023-05-09 07:32:48,810 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'add_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) fx_variables = {}, check_level = 2023-05-09 07:32:48,810 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step climate_statistics 2023-05-09 07:32:48,811 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) operator = 'mean' 2023-05-09 07:32:48,815 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_region 2023-05-09 07:32:48,817 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_region' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) start_longitude = 320.0, end_longitude = 345.0, start_latitude = -81.0, end_latitude = 89.9 2023-05-09 07:32:48,823 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step regrid 2023-05-09 07:32:48,824 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'regrid' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) target_grid = '1x1', scheme = 'linear' 2023-05-09 07:32:48,828 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step extract_transect 2023-05-09 07:32:48,829 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'extract_transect' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) longitude = 332.0 2023-05-09 07:32:48,831 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step remove_fx_variables 2023-05-09 07:32:48,832 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'remove_fx_variables' on the data loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) 2023-05-09 07:32:48,832 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step save 2023-05-09 07:32:48,834 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'save' on the data [] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) compress = False, filename = '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc' 2023-05-09 07:32:48,835 UTC [2798263] DEBUG esmvalcore.preprocessor._io:308 Saving cubes [] to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc 2023-05-09 07:32:48,864 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,864 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,864 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,864 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37619 2023-05-09 07:32:48,873 UTC [2798107] INFO esmvalcore._task:779 Progress: 7 tasks running, 2 tasks waiting for ancestors, 48/57 done 2023-05-09 07:32:48,897 UTC [2798264] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:48,897 UTC [2798264] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS9252K/obsdata/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc', '/projects/NS2980K/data/obsdata/cmor/Tier2/WOA/OBS_WOA_clim_2013v2_Oyr_o2_200001-200012.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_vs_WOA/o2/OBS_WOA_clim_2013v2_Oyr_o2_2000-2000_fixed'] 2023-05-09 07:32:48,908 UTC [2798264] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/o2 (priority 53) in 0:00:01.136512 2023-05-09 07:32:48,925 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,925 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,925 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,925 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41967 2023-05-09 07:32:48,987 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:48,987 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:48,987 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:48,987 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37836 2023-05-09 07:32:49,040 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 2 tasks waiting for ancestors, 49/57 done 2023-05-09 07:32:49,048 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,048 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,048 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,048 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 38845 2023-05-09 07:32:49,106 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_0.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,110 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,110 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,110 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,110 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 44523 2023-05-09 07:32:49,141 UTC [2798107] INFO esmvalcore._task:779 Progress: 5 tasks running, 2 tasks waiting for ancestors, 50/57 done 2023-05-09 07:32:49,145 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_1.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,149 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,149 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,149 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,149 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42002 2023-05-09 07:32:49,154 UTC [2798268] INFO esmvalcore._task:260 Starting task diag_transect_vs_WOA/Transects_vs_WOA in process [2798268] 2023-05-09 07:32:49,157 UTC [2798268] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA/settings.yml'] 2023-05-09 07:32:49,157 UTC [2798268] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:49,157 UTC [2798268] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 07:32:49,157 UTC [2798268] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 07:32:49,158 UTC [2798268] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_transect_vs_WOA/Transects_vs_WOA 2023-05-09 07:32:49,158 UTC [2798268] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA/log.txt 2023-05-09 07:32:49,158 UTC [2798268] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA/settings.yml 2023-05-09 07:32:49,184 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_10.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,188 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,189 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,189 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,189 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 38238 2023-05-09 07:32:49,224 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_11.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,228 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,228 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,228 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,228 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41778 2023-05-09 07:32:49,242 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 1 tasks waiting for ancestors, 50/57 done 2023-05-09 07:32:49,250 UTC [2798263] DEBUG esmvalcore.preprocessor:347 Running preprocessor step cleanup 2023-05-09 07:32:49,250 UTC [2798263] DEBUG esmvalcore.preprocessor:308 Running preprocessor function 'cleanup' on the data ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004.nc'] loaded from original input file(s) ['/projects/NS9560K-datalake/ESGF/cmip5/output1/MOHC/HadGEM2-ES/historical/yr/ocnBgchem/Oyr/r1i1p1/v20110916/dfe/dfe_Oyr_HadGEM2-ES_historical_r1i1p1_1960-2005.nc'] with function argument(s) remove = ['/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_transect_no_data/dfe/CMIP5_HadGEM2-ES_Oyr_historical_r1i1p1_dfe_2001-2004_fixed'] 2023-05-09 07:32:49,260 UTC [2798263] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/dfe (priority 56) in 0:00:00.486715 2023-05-09 07:32:49,263 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_12.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,364 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,364 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,364 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,364 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37461 2023-05-09 07:32:49,399 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_13.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,403 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,403 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,403 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,403 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 38123 2023-05-09 07:32:49,437 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_14.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,441 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,441 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,441 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,441 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 39148 2023-05-09 07:32:49,464 UTC [2798107] INFO esmvalcore._task:779 Progress: 5 tasks running, 1 tasks waiting for ancestors, 51/57 done 2023-05-09 07:32:49,469 UTC [2798262] INFO esmvalcore._task:260 Starting task diag_transect_no_data/Transects_no_data in process [2798262] 2023-05-09 07:32:49,472 UTC [2798262] INFO esmvalcore._task:501 Running command ['/projects/NS2980K/conda/esmvaltool2.7.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py', '/projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data/settings.yml'] 2023-05-09 07:32:49,472 UTC [2798262] DEBUG esmvalcore._task:502 in environment {'MPLBACKEND': 'Agg'} 2023-05-09 07:32:49,472 UTC [2798262] DEBUG esmvalcore._task:504 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data 2023-05-09 07:32:49,472 UTC [2798262] INFO esmvalcore._task:505 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/work/diag_transect_no_data/Transects_no_data 2023-05-09 07:32:49,472 UTC [2798262] INFO esmvalcore._task:506 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_transect_no_data/Transects_no_data 2023-05-09 07:32:49,472 UTC [2798262] INFO esmvalcore._task:507 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data/log.txt 2023-05-09 07:32:49,472 UTC [2798262] INFO esmvalcore._task:517 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.7.0/bin/python /projects/NS2980K/conda/esmvaltool2.7.0/lib/python3.10/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_transects.py /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data/settings.yml 2023-05-09 07:32:49,476 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_2.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,480 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,480 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,480 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,481 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42502 2023-05-09 07:32:49,516 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_3.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,520 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,520 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,520 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,520 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41556 2023-05-09 07:32:49,555 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_4.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,561 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,561 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,561 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,561 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 44403 2023-05-09 07:32:49,565 UTC [2798107] INFO esmvalcore._task:779 Progress: 6 tasks running, 0 tasks waiting for ancestors, 51/57 done 2023-05-09 07:32:49,597 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_5.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,600 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,601 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,601 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,601 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18692 2023-05-09 07:32:49,630 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_6.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,634 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,634 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,634 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,634 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42906 2023-05-09 07:32:49,692 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_7.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,696 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,696 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,696 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,696 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41086 2023-05-09 07:32:49,731 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_8.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,735 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,735 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,735 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,735 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 18873 2023-05-09 07:32:49,764 UTC [2798265] WARNING esmvalcore._task:652 Ancestor file(s) /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/preproc/diag_timeseries_scalars/mfo/CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_2001-2004.nc specified for recording provenance of /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/plots/diag_timeseries_scalars/Scalar_timeseries/diag_CMIP5_HadGEM2-ES_Omon_historical_r1i1p1_mfo_prep_timeseries_scalar_diag_timeseries_scalars_2001_2004_timeseries_9.png, created by diagnostic script ocean/diagnostic_timeseries.py in task diag_timeseries_scalars/Scalar_timeseries is a string but should be a list of strings 2023-05-09 07:32:49,768 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:49,768 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:49,768 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:49,768 UTC [2798265] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 40690 2023-05-09 07:32:49,803 UTC [2798265] DEBUG esmvalcore._task:684 Collecting provenance of task diag_timeseries_scalars/Scalar_timeseries took 1.7 seconds 2023-05-09 07:32:49,803 UTC [2798265] INFO esmvalcore._task:265 Successfully completed task diag_timeseries_scalars/Scalar_timeseries (priority 22) in 0:00:12.714288 2023-05-09 07:32:49,965 UTC [2798107] INFO esmvalcore._task:779 Progress: 5 tasks running, 0 tasks waiting for ancestors, 52/57 done 2023-05-09 07:32:53,485 UTC [2798262] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:53,485 UTC [2798262] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:53,486 UTC [2798262] DEBUG esmvalcore._task:590 Script ocean/diagnostic_transects.py completed successfully 2023-05-09 07:32:53,486 UTC [2798262] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_no_data/Transects_no_data/diagnostic_provenance.yml 2023-05-09 07:32:53,498 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:53,498 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:53,498 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:53,498 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 43767 2023-05-09 07:32:53,541 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:53,541 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:53,541 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:53,541 UTC [2798262] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 46941 2023-05-09 07:32:53,577 UTC [2798262] DEBUG esmvalcore._task:684 Collecting provenance of task diag_transect_no_data/Transects_no_data took 0.1 seconds 2023-05-09 07:32:53,578 UTC [2798262] INFO esmvalcore._task:265 Successfully completed task diag_transect_no_data/Transects_no_data (priority 54) in 0:00:04.108341 2023-05-09 07:32:53,770 UTC [2798107] INFO esmvalcore._task:779 Progress: 4 tasks running, 0 tasks waiting for ancestors, 53/57 done 2023-05-09 07:32:54,506 UTC [2798266] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:32:54,507 UTC [2798266] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:32:54,508 UTC [2798266] DEBUG esmvalcore._task:590 Script ocean/diagnostic_maps.py completed successfully 2023-05-09 07:32:54,508 UTC [2798266] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_no_data/Global_Ocean_surface_map/diagnostic_provenance.yml 2023-05-09 07:32:54,532 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:54,532 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:54,532 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:54,532 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:32:54,588 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:54,588 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:54,588 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:54,588 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:32:54,642 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:54,642 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:54,642 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:54,642 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:32:54,690 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:54,690 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:54,690 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:54,690 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:32:54,732 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:32:54,732 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:32:54,732 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:32:54,732 UTC [2798266] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:32:54,767 UTC [2798266] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_no_data/Global_Ocean_surface_map took 0.3 seconds 2023-05-09 07:32:54,767 UTC [2798266] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_no_data/Global_Ocean_surface_map (priority 42) in 0:00:09.293056 2023-05-09 07:32:54,876 UTC [2798107] INFO esmvalcore._task:779 Progress: 3 tasks running, 0 tasks waiting for ancestors, 54/57 done 2023-05-09 07:33:01,478 UTC [2798269] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:33:01,478 UTC [2798269] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:33:01,479 UTC [2798269] DEBUG esmvalcore._task:590 Script ocean/diagnostic_maps.py completed successfully 2023-05-09 07:33:01,479 UTC [2798269] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_surface_map/diagnostic_provenance.yml 2023-05-09 07:33:01,509 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,509 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,509 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,509 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,553 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,553 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,553 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,553 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,604 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,604 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,604 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,604 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,654 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,654 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,654 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,654 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,704 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,704 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,704 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,704 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,751 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,751 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,751 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,751 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,793 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,793 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,793 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,794 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,838 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,838 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,838 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,838 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,889 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,889 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,889 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,889 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,941 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,941 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,941 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,941 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:01,992 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:01,992 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:01,992 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:01,992 UTC [2798269] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:02,034 UTC [2798269] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_vs_WOA/Global_Ocean_surface_map took 0.6 seconds 2023-05-09 07:33:02,035 UTC [2798269] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_surface_map (priority 34) in 0:00:17.611283 2023-05-09 07:33:02,185 UTC [2798107] INFO esmvalcore._task:779 Progress: 2 tasks running, 0 tasks waiting for ancestors, 55/57 done 2023-05-09 07:33:02,733 UTC [2798267] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.6 GB 2023-05-09 07:33:02,733 UTC [2798267] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:33:02,733 UTC [2798267] DEBUG esmvalcore._task:590 Script ocean/diagnostic_model_vs_obs.py completed successfully 2023-05-09 07:33:02,734 UTC [2798267] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs/diagnostic_provenance.yml 2023-05-09 07:33:02,765 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:02,766 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:02,766 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:02,766 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,012 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,012 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,012 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,012 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,199 UTC [2798268] INFO esmvalcore._task:127 Maximum memory used (estimate): 0.5 GB 2023-05-09 07:33:03,199 UTC [2798268] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:33:03,200 UTC [2798268] DEBUG esmvalcore._task:590 Script ocean/diagnostic_transects.py completed successfully 2023-05-09 07:33:03,200 UTC [2798268] DEBUG esmvalcore._task:609 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/run/diag_transect_vs_WOA/Transects_vs_WOA/diagnostic_provenance.yml 2023-05-09 07:33:03,256 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,256 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,256 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,256 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,274 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,274 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,274 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,274 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 44591 2023-05-09 07:33:03,319 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,319 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,319 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,319 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,341 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,341 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,341 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,341 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42215 2023-05-09 07:33:03,407 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,407 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,407 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,407 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41364 2023-05-09 07:33:03,477 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,477 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,477 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,477 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 24429 2023-05-09 07:33:03,539 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,539 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,539 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,539 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 34723 2023-05-09 07:33:03,563 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,563 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,563 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,563 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 50184 2023-05-09 07:33:03,605 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,605 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,605 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,605 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42557 2023-05-09 07:33:03,623 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,623 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,623 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,623 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,668 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,669 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,669 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,669 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 40599 2023-05-09 07:33:03,732 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,732 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,732 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,732 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 36473 2023-05-09 07:33:03,795 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,795 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,795 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,795 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31527 2023-05-09 07:33:03,856 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,856 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,856 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,856 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 23540 2023-05-09 07:33:03,872 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,872 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,872 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,872 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 65536 2023-05-09 07:33:03,913 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,913 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,913 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,913 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42773 2023-05-09 07:33:03,977 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:03,977 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:03,977 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:03,977 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 41688 2023-05-09 07:33:04,017 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,017 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,017 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,017 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 52621 2023-05-09 07:33:04,059 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,059 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,059 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,059 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 50492 2023-05-09 07:33:04,098 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,098 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,098 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,098 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 55734 2023-05-09 07:33:04,106 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,107 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,107 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,107 UTC [2798267] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 34937 2023-05-09 07:33:04,140 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,140 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,140 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,140 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37213 2023-05-09 07:33:04,154 UTC [2798267] DEBUG esmvalcore._task:684 Collecting provenance of task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs took 1.4 seconds 2023-05-09 07:33:04,154 UTC [2798267] INFO esmvalcore._task:265 Successfully completed task diag_surface_maps_vs_WOA/Global_Ocean_model_vs_obs (priority 35) in 0:00:19.477865 2023-05-09 07:33:04,180 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,180 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,180 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,180 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 50836 2023-05-09 07:33:04,221 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,221 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,221 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,221 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 21584 2023-05-09 07:33:04,258 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,258 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,258 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,258 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 51486 2023-05-09 07:33:04,290 UTC [2798107] INFO esmvalcore._task:779 Progress: 1 tasks running, 0 tasks waiting for ancestors, 56/57 done 2023-05-09 07:33:04,301 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,301 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,301 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,301 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 26473 2023-05-09 07:33:04,338 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,338 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,339 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,339 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 31388 2023-05-09 07:33:04,378 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,378 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,378 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,378 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27865 2023-05-09 07:33:04,415 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,415 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,415 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,415 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 42520 2023-05-09 07:33:04,454 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,454 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,454 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,454 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 27228 2023-05-09 07:33:04,493 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,493 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,493 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,493 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 37956 2023-05-09 07:33:04,531 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,531 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,531 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,531 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 19864 2023-05-09 07:33:04,568 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IHDR' 16 13 2023-05-09 07:33:04,568 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'tEXt' 41 57 2023-05-09 07:33:04,568 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'pHYs' 110 9 2023-05-09 07:33:04,568 UTC [2798268] DEBUG PIL.PngImagePlugin:201 STREAM b'IDAT' 131 44950 2023-05-09 07:33:04,603 UTC [2798268] DEBUG esmvalcore._task:684 Collecting provenance of task diag_transect_vs_WOA/Transects_vs_WOA took 1.4 seconds 2023-05-09 07:33:04,603 UTC [2798268] INFO esmvalcore._task:265 Successfully completed task diag_transect_vs_WOA/Transects_vs_WOA (priority 48) in 0:00:15.448460 2023-05-09 07:33:04,691 UTC [2798107] INFO esmvalcore._task:779 Progress: 0 tasks running, 0 tasks waiting for ancestors, 57/57 done 2023-05-09 07:33:04,691 UTC [2798107] INFO esmvalcore._task:784 Successfully completed all tasks. 2023-05-09 07:33:05,518 UTC [2798107] INFO esmvalcore.experimental.recipe_output:212 Wrote recipe output to: file:///projects/NS2980K/www/tomast/esmvaltool2.7.0/recipe_ocean_bgc_20230509_073228/index.html 2023-05-09 07:33:05,518 UTC [2798107] INFO esmvalcore._main:127 Ending the Earth System Model Evaluation Tool at time: 2023-05-09 07:33:05 UTC 2023-05-09 07:33:05,518 UTC [2798107] INFO esmvalcore._main:130 Time for running the recipe was: 0:00:35.330139 2023-05-09 07:33:06,447 UTC [2798107] INFO esmvalcore._task:127 Maximum memory used (estimate): 13.9 GB 2023-05-09 07:33:06,447 UTC [2798107] INFO esmvalcore._task:129 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2023-05-09 07:33:06,448 UTC [2798107] INFO esmvalcore._main:454 Removing preproc containing preprocessed data 2023-05-09 07:33:06,448 UTC [2798107] INFO esmvalcore._main:455 If this data is further needed, then 2023-05-09 07:33:06,448 UTC [2798107] INFO esmvalcore._main:456 set remove_preproc_dir to false in config-user.yml 2023-05-09 07:33:06,474 UTC [2798107] INFO esmvalcore._main:446 Run was successful