2024-03-22 14:13:25,387 UTC [1423277] INFO esmvalcore._main:492 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2024-03-22 14:13:25,387 UTC [1423277] INFO esmvalcore._main:493 Package versions 2024-03-22 14:13:25,387 UTC [1423277] INFO esmvalcore._main:494 ---------------- 2024-03-22 14:13:25,387 UTC [1423277] INFO esmvalcore._main:495 ESMValCore: 2.10.0 2024-03-22 14:13:25,388 UTC [1423277] INFO esmvalcore._main:497 ESMValTool: 2.10.0 2024-03-22 14:13:25,388 UTC [1423277] INFO esmvalcore._main:498 ---------------- 2024-03-22 14:13:25,388 UTC [1423277] INFO esmvalcore._main:499 Using config file /nird/home/tomast/.esmvaltool/config-user.yml 2024-03-22 14:13:25,388 UTC [1423277] INFO esmvalcore._main:500 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/main_log_debug.txt 2024-03-22 14:13:25,747 UTC [1423277] INFO esmvalcore.config._esgf_pyclient:116 Using default ESGF configuration, configuration file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml not present. 2024-03-22 14:13:25,747 UTC [1423277] WARNING esmvalcore.config._esgf_pyclient:181 ESGF credentials missing, only data that is accessible without logging in will be available. See https://esgf.github.io/esgf-user-support/user_guide.html for instructions on how to create an account if you do not have one yet. Next, configure your system so esmvaltool can use your credentials. This can be done using the keyring package, or you can just enter them in /nird/home/tomast/.esmvaltool/esgf-pyclient.yml. keyring ======= First install the keyring package (requires a supported backend, see https://pypi.org/project/keyring/): $ pip install keyring Next, set your username and password by running the commands: $ keyring set ESGF hostname $ keyring set ESGF username $ keyring set ESGF password To check that you entered your credentials correctly, run: $ keyring get ESGF hostname $ keyring get ESGF username $ keyring get ESGF password configuration file ================== You can store the hostname, username, and password or your OpenID account in a plain text in the file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml like this: logon: hostname: "your-hostname" username: "your-username" password: "your-password" or your can configure an interactive log in: logon: interactive: true Note that storing your password in plain text in the configuration file is less secure. On shared systems, make sure the permissions of the file are set so only you can read it, i.e. $ ls -l /nird/home/tomast/.esmvaltool/esgf-pyclient.yml shows permissions -rw-------. 2024-03-22 14:13:26,090 UTC [1423277] INFO esmvalcore._main:91 Starting the Earth System Model Evaluation Tool at time: 2024-03-22 14:13:26 UTC 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:95 ---------------------------------------------------------------------- 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:96 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/recipes-2.10.0/data_extraction/recipe_southern_ocean_analysis.yml 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:97 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:98 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/work 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:99 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:100 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/plots 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:101 ---------------------------------------------------------------------- 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:104 Running tasks using at most 4 processes 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:106 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2024-03-22 14:13:26,091 UTC [1423277] INFO esmvalcore._main:109 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2024-03-22 14:13:26,091 UTC [1423277] WARNING esmvalcore.config._dask:18 Using the Dask basic scheduler. This may lead to slow computations and out-of-memory errors. Note that the basic scheduler may still be the best choice for preprocessor functions that are not lazy. In that case, you can safely ignore this warning. See https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#dask-distributed-configuration for more information. 2024-03-22 14:13:26,092 UTC [1423277] DEBUG esmvalcore._recipe.check:54 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_recipe/recipe_schema.yml 2024-03-22 14:13:26,139 UTC [1423277] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable ph in diagnostic diag_depthInt_1 2024-03-22 14:13:26,139 UTC [1423277] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-LM, historical, r1i1p1f1, gr 2024-03-22 14:13:26,140 UTC [1423277] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-MM, historical, r1i1p1f1, gr 2024-03-22 14:13:26,140 UTC [1423277] DEBUG esmvalcore._recipe.recipe:781 Retrieving diagnostics from recipe 2024-03-22 14:13:26,140 UTC [1423277] DEBUG esmvalcore._recipe.recipe:809 Setting script for diagnostic diag_depthInt_1 2024-03-22 14:13:26,140 UTC [1423277] INFO esmvalcore._recipe.recipe:999 Creating tasks from recipe 2024-03-22 14:13:26,140 UTC [1423277] INFO esmvalcore._recipe.recipe:1008 Creating tasks for diagnostic diag_depthInt_1 2024-03-22 14:13:26,140 UTC [1423277] INFO esmvalcore._recipe.recipe:930 Creating diagnostic task diag_depthInt_1/Global_Ocean_DepthIntegration_map 2024-03-22 14:13:26,140 UTC [1423277] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task diag_depthInt_1/ph 2024-03-22 14:13:26,141 UTC [1423277] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'prep_depth_integration_1' task for variable 'ph' 2024-03-22 14:13:26,162 UTC [1423277] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc 2024-03-22 14:13:26,166 UTC [1423277] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:26,166 UTC [1423277] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gr, v20190815 2024-03-22 14:13:26,167 UTC [1423277] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc 2024-03-22 14:13:26,170 UTC [1423277] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:26,170 UTC [1423277] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gr, v20191108 2024-03-22 14:13:26,171 UTC [1423277] INFO esmvalcore._recipe.recipe:677 PreprocessingTask diag_depthInt_1/ph created. 2024-03-22 14:13:26,171 UTC [1423277] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask diag_depthInt_1/ph will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc 2024-03-22 14:13:26,171 UTC [1423277] DEBUG esmvalcore._recipe.recipe:858 Linking tasks for diagnostic diag_depthInt_1 script Global_Ocean_DepthIntegration_map 2024-03-22 14:13:26,171 UTC [1423277] DEBUG esmvalcore._recipe.recipe:867 Pattern diag_depthInt_1/ph matches ['diag_depthInt_1/ph'] 2024-03-22 14:13:26,171 UTC [1423277] INFO esmvalcore._recipe.recipe:1048 These tasks will be executed: diag_depthInt_1/Global_Ocean_DepthIntegration_map, diag_depthInt_1/ph 2024-03-22 14:13:26,171 UTC [1423277] DEBUG esmvalcore._main:128 Recipe summary: DiagnosticTask: diag_depthInt_1/Global_Ocean_DepthIntegration_map script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/plots/diag_depthInt_1/Global_Ocean_DepthIntegration_map', 'profile_diagnostic': False, 'recipe': PosixPath('recipe_southern_ocean_analysis.yml'), 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map', 'script': 'Global_Ocean_DepthIntegration_map', 'version': '2.10.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/work/diag_depthInt_1/Global_Ocean_DepthIntegration_map'} ancestors: PreprocessingTask: diag_depthInt_1/ph order: ['depth_integration', 'climate_statistics', 'remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] settings: {'climate_statistics': {'operator': 'mean'}, 'depth_integration': {}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] settings: {'climate_statistics': {'operator': 'mean'}, 'depth_integration': {}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc')}} ancestors: None 2024-03-22 14:13:26,182 UTC [1423277] INFO esmvalcore._recipe.recipe:1111 Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/recipe_southern_ocean_analysis_filled.yml 2024-03-22 14:13:26,183 UTC [1423277] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-22 14:13:26,183 UTC [1423277] INFO esmvalcore.config._dask:70 Using the Dask basic scheduler. 2024-03-22 14:13:26,183 UTC [1423277] INFO esmvalcore._task:760 Running 2 tasks using 2 processes 2024-03-22 14:13:26,207 UTC [1423442] INFO esmvalcore._task:261 Starting task diag_depthInt_1/ph in process [1423442] 2024-03-22 14:13:26,299 UTC [1423442] DEBUG esmvalcore.preprocessor:651 Running block ['depth_integration', 'climate_statistics'] 2024-03-22 14:13:26,299 UTC [1423442] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc 2024-03-22 14:13:26,300 UTC [1423442] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-22 14:13:26,300 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-22 14:13:26,301 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gr_v20190815_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-22 14:13:26,303 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-22 14:13:26,303 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) ignore_warnings = None 2024-03-22 14:13:26,303 UTC [1423442] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:26,305 UTC [1423277] INFO esmvalcore._task:793 Progress: 1 tasks running, 1 tasks waiting for ancestors, 0/2 done 2024-03-22 14:13:26,457 UTC [1423442] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:26,457 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-22 14:13:26,461 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-22 14:13:26,462 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:26,462 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:26,462 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:26,527 UTC [1423442] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:26,527 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-22 14:13:26,529 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = 2024-03-22 14:13:26,529 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-22 14:13:26,530 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-22 14:13:26,561 UTC [1423442] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-22 14:13:26,561 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-22 14:13:26,562 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) timerange = '2001/2002' 2024-03-22 14:13:26,567 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-22 14:13:26,568 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-22 14:13:26,568 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-22 14:13:26,569 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-22 14:13:26,569 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-22 14:13:26,570 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-22 14:13:26,570 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step depth_integration 2024-03-22 14:13:26,571 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'depth_integration' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) 2024-03-22 14:13:27,359 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-22 14:13:27,360 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) operator = 'mean' 2024-03-22 14:13:27,375 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-22 14:13:27,377 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc') 2024-03-22 14:13:27,379 UTC [1423442] DEBUG esmvalcore.preprocessor._io:452 Saving cube: Depth_integrated_sea_water_ph_reported_on_total_scale / (m) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Scalar coordinates: depth 4000.0 m, bound=(0.0, 8000.0) m time 2002-01-01 00:00:00, bound=(2001-01-01 00:00:00, 2003-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 depth: sum 3 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -91250 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:08e314340b9dd440c36c1b8e484514f4' title 'NorESM2-LM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc 2024-03-22 14:13:34,577 UTC [1423442] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc 2024-03-22 14:13:34,577 UTC [1423442] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-22 14:13:34,577 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-22 14:13:34,578 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gr_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-22 14:13:34,579 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-22 14:13:34,579 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) ignore_warnings = None 2024-03-22 14:13:34,579 UTC [1423442] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:34,701 UTC [1423442] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:34,701 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-22 14:13:34,703 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-22 14:13:34,703 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:34,703 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:34,704 UTC [1423442] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc) 2024-03-22 14:13:34,859 UTC [1423442] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc 2024-03-22 14:13:34,859 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-22 14:13:34,860 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = 2024-03-22 14:13:34,861 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-22 14:13:34,861 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-22 14:13:34,903 UTC [1423442] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-22 14:13:34,903 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-22 14:13:34,904 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) timerange = '2001/2002' 2024-03-22 14:13:34,908 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-22 14:13:34,910 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'prep_depth_integration_1', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', mip = 'Omon', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '2001/2002', variable_group = 'ph', diagnostic = 'diag_depthInt_1', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-22 14:13:34,910 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-22 14:13:34,911 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-22 14:13:34,911 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-22 14:13:34,912 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-22 14:13:34,912 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step depth_integration 2024-03-22 14:13:34,913 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'depth_integration' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) 2024-03-22 14:13:35,678 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-22 14:13:35,680 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) operator = 'mean' 2024-03-22 14:13:35,697 UTC [1423442] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-22 14:13:35,699 UTC [1423442] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_200001-200912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc') 2024-03-22 14:13:35,699 UTC [1423442] DEBUG esmvalcore.preprocessor._io:452 Saving cube: Depth_integrated_sea_water_ph_reported_on_total_scale / (m) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Scalar coordinates: depth 4000.0 m, bound=(0.0, 8000.0) m time 2002-01-01 00:00:00, bound=(2001-01-01 00:00:00, 2003-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 depth: sum 3 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -236885 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/preproc/diag_depthInt_1/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_2001-2002.nc 2024-03-22 14:13:42,742 UTC [1423442] INFO esmvalcore._task:266 Successfully completed task diag_depthInt_1/ph (priority 1) in 0:00:16.535068 2024-03-22 14:13:42,815 UTC [1423277] INFO esmvalcore._task:793 Progress: 0 tasks running, 1 tasks waiting for ancestors, 1/2 done 2024-03-22 14:13:42,819 UTC [1423443] INFO esmvalcore._task:261 Starting task diag_depthInt_1/Global_Ocean_DepthIntegration_map in process [1423443] 2024-03-22 14:13:42,822 UTC [1423443] INFO esmvalcore._task:502 Running command ['/projects/NS2980K/conda/esmvaltool2.10.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map/settings.yml'] 2024-03-22 14:13:42,822 UTC [1423443] DEBUG esmvalcore._task:503 in environment {'MPLBACKEND': 'Agg'} 2024-03-22 14:13:42,822 UTC [1423443] DEBUG esmvalcore._task:505 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map 2024-03-22 14:13:42,822 UTC [1423443] INFO esmvalcore._task:506 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/work/diag_depthInt_1/Global_Ocean_DepthIntegration_map 2024-03-22 14:13:42,822 UTC [1423443] INFO esmvalcore._task:507 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/plots/diag_depthInt_1/Global_Ocean_DepthIntegration_map 2024-03-22 14:13:42,822 UTC [1423443] INFO esmvalcore._task:508 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map/log.txt 2024-03-22 14:13:42,822 UTC [1423443] INFO esmvalcore._task:518 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.10.0/bin/python /projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map/settings.yml 2024-03-22 14:13:42,915 UTC [1423277] INFO esmvalcore._task:793 Progress: 1 tasks running, 0 tasks waiting for ancestors, 1/2 done 2024-03-22 14:13:46,838 UTC [1423443] INFO esmvalcore._task:128 Maximum memory used (estimate): 0.3 GB 2024-03-22 14:13:46,839 UTC [1423443] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-22 14:13:46,839 UTC [1423443] DEBUG esmvalcore._task:591 Script ocean/diagnostic_maps.py completed successfully 2024-03-22 14:13:46,840 UTC [1423443] DEBUG esmvalcore._task:610 Collecting provenance from /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/diag_depthInt_1/Global_Ocean_DepthIntegration_map/diagnostic_provenance.yml 2024-03-22 14:13:46,894 UTC [1423443] DEBUG urllib3.connectionpool:1052 Starting new HTTPS connection (1): cera-www.dkrz.de:443 2024-03-22 14:13:47,145 UTC [1423443] DEBUG urllib3.connectionpool:546 https://cera-www.dkrz.de:443 "GET /WDCC/ui/cerasearch/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-LM.historical HTTP/1.1" 302 275 2024-03-22 14:13:47,181 UTC [1423443] DEBUG urllib3.connectionpool:546 https://cera-www.dkrz.de:443 "GET /ui/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-LM.historical HTTP/1.1" 302 277 2024-03-22 14:13:47,183 UTC [1423443] DEBUG urllib3.connectionpool:1052 Starting new HTTPS connection (1): www.wdc-climate.de:443 2024-03-22 14:13:47,566 UTC [1423443] DEBUG urllib3.connectionpool:546 https://www.wdc-climate.de:443 "GET /ui/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-LM.historical HTTP/1.1" 200 14839 2024-03-22 14:13:47,608 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'IHDR' 16 13 2024-03-22 14:13:47,608 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'tEXt' 41 57 2024-03-22 14:13:47,608 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'pHYs' 110 9 2024-03-22 14:13:47,608 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'IDAT' 131 65536 2024-03-22 14:13:47,663 UTC [1423443] DEBUG urllib3.connectionpool:1052 Starting new HTTPS connection (1): cera-www.dkrz.de:443 2024-03-22 14:13:47,850 UTC [1423443] DEBUG urllib3.connectionpool:546 https://cera-www.dkrz.de:443 "GET /WDCC/ui/cerasearch/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-MM.historical HTTP/1.1" 302 275 2024-03-22 14:13:47,886 UTC [1423443] DEBUG urllib3.connectionpool:546 https://cera-www.dkrz.de:443 "GET /ui/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-MM.historical HTTP/1.1" 302 277 2024-03-22 14:13:47,888 UTC [1423443] DEBUG urllib3.connectionpool:1052 Starting new HTTPS connection (1): www.wdc-climate.de:443 2024-03-22 14:13:48,084 UTC [1423443] DEBUG urllib3.connectionpool:546 https://www.wdc-climate.de:443 "GET /ui/cerarest/exportcmip6?input=CMIP6.CMIP.NCC.NorESM2-MM.historical HTTP/1.1" 200 14399 2024-03-22 14:13:48,121 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'IHDR' 16 13 2024-03-22 14:13:48,121 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'tEXt' 41 57 2024-03-22 14:13:48,121 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'pHYs' 110 9 2024-03-22 14:13:48,121 UTC [1423443] DEBUG PIL.PngImagePlugin:190 STREAM b'IDAT' 131 65536 2024-03-22 14:13:48,171 UTC [1423443] DEBUG esmvalcore._task:685 Collecting provenance of task diag_depthInt_1/Global_Ocean_DepthIntegration_map took 1.3 seconds 2024-03-22 14:13:48,172 UTC [1423443] INFO esmvalcore._task:266 Successfully completed task diag_depthInt_1/Global_Ocean_DepthIntegration_map (priority 0) in 0:00:05.352225 2024-03-22 14:13:48,231 UTC [1423277] INFO esmvalcore._task:793 Progress: 0 tasks running, 0 tasks waiting for ancestors, 2/2 done 2024-03-22 14:13:48,231 UTC [1423277] INFO esmvalcore._task:798 Successfully completed all tasks. 2024-03-22 14:13:48,307 UTC [1423277] INFO esmvalcore._recipe.recipe:1076 Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/run/recipe_southern_ocean_analysis_filled.yml 2024-03-22 14:13:48,375 UTC [1423277] INFO esmvalcore.experimental.recipe_output:244 Wrote recipe output to: file:///projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_southern_ocean_analysis_20240322_141325/index.html 2024-03-22 14:13:48,375 UTC [1423277] INFO esmvalcore._main:133 Ending the Earth System Model Evaluation Tool at time: 2024-03-22 14:13:48 UTC 2024-03-22 14:13:48,376 UTC [1423277] INFO esmvalcore._main:136 Time for running the recipe was: 0:00:22.285039 2024-03-22 14:13:48,846 UTC [1423277] INFO esmvalcore._task:128 Maximum memory used (estimate): 7.9 GB 2024-03-22 14:13:48,847 UTC [1423277] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-22 14:13:48,847 UTC [1423277] INFO esmvalcore._main:470 Removing `preproc` directory containing preprocessed data 2024-03-22 14:13:48,848 UTC [1423277] INFO esmvalcore._main:473 If this data is further needed, then set `remove_preproc_dir` to `false` in your user configuration file 2024-03-22 14:13:48,849 UTC [1423277] INFO esmvalcore._main:450 Run was successful