2024-03-21 13:31:43,534 UTC [1100078] INFO esmvalcore._main:492 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2024-03-21 13:31:43,534 UTC [1100078] INFO esmvalcore._main:493 Package versions 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:494 ---------------- 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:495 ESMValCore: 2.10.0 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:497 ESMValTool: 2.10.0 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:498 ---------------- 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:499 Using config file /nird/home/tomast/.esmvaltool/config-user.yml 2024-03-21 13:31:43,535 UTC [1100078] INFO esmvalcore._main:500 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/main_log_debug.txt 2024-03-21 13:31:44,287 UTC [1100078] INFO esmvalcore.config._esgf_pyclient:116 Using default ESGF configuration, configuration file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml not present. 2024-03-21 13:31:44,287 UTC [1100078] WARNING esmvalcore.config._esgf_pyclient:181 ESGF credentials missing, only data that is accessible without logging in will be available. See https://esgf.github.io/esgf-user-support/user_guide.html for instructions on how to create an account if you do not have one yet. Next, configure your system so esmvaltool can use your credentials. This can be done using the keyring package, or you can just enter them in /nird/home/tomast/.esmvaltool/esgf-pyclient.yml. keyring ======= First install the keyring package (requires a supported backend, see https://pypi.org/project/keyring/): $ pip install keyring Next, set your username and password by running the commands: $ keyring set ESGF hostname $ keyring set ESGF username $ keyring set ESGF password To check that you entered your credentials correctly, run: $ keyring get ESGF hostname $ keyring get ESGF username $ keyring get ESGF password configuration file ================== You can store the hostname, username, and password or your OpenID account in a plain text in the file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml like this: logon: hostname: "your-hostname" username: "your-username" password: "your-password" or your can configure an interactive log in: logon: interactive: true Note that storing your password in plain text in the configuration file is less secure. On shared systems, make sure the permissions of the file are set so only you can read it, i.e. $ ls -l /nird/home/tomast/.esmvaltool/esgf-pyclient.yml shows permissions -rw-------. 2024-03-21 13:31:44,959 UTC [1100078] INFO esmvalcore._main:91 Starting the Earth System Model Evaluation Tool at time: 2024-03-21 13:31:44 UTC 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:95 ---------------------------------------------------------------------- 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:96 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/recipes-2.10.0/data_extraction/recipe_pH_NorESM2.yml 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:97 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:98 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/work 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:99 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:100 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/plots 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:101 ---------------------------------------------------------------------- 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:104 Running tasks using at most 4 processes 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:106 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2024-03-21 13:31:44,960 UTC [1100078] INFO esmvalcore._main:109 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2024-03-21 13:31:44,960 UTC [1100078] WARNING esmvalcore.config._dask:18 Using the Dask basic scheduler. This may lead to slow computations and out-of-memory errors. Note that the basic scheduler may still be the best choice for preprocessor functions that are not lazy. In that case, you can safely ignore this warning. See https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#dask-distributed-configuration for more information. 2024-03-21 13:31:44,962 UTC [1100078] DEBUG esmvalcore._recipe.check:54 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_recipe/recipe_schema.yml 2024-03-21 13:31:44,972 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable ph in diagnostic time_average_1986-2005 2024-03-21 13:31:44,972 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-LM, historical, r1i1p1f1, gr 2024-03-21 13:31:44,972 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-MM, historical, r1i1p1f1, gr 2024-03-21 13:31:44,972 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable sftlf in diagnostic time_average_1986-2005 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftlf, fx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftlf, fx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable sftof in diagnostic time_average_1986-2005 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftof, Ofx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftof, Ofx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable areacello in diagnostic time_average_1986-2005 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: areacello, Ofx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: areacello, Ofx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.recipe:781 Retrieving diagnostics from recipe 2024-03-21 13:31:44,973 UTC [1100078] DEBUG esmvalcore._recipe.recipe:809 Setting script for diagnostic time_average_1986-2005 2024-03-21 13:31:44,974 UTC [1100078] INFO esmvalcore._recipe.recipe:999 Creating tasks from recipe 2024-03-21 13:31:44,974 UTC [1100078] INFO esmvalcore._recipe.recipe:1008 Creating tasks for diagnostic time_average_1986-2005 2024-03-21 13:31:44,974 UTC [1100078] INFO esmvalcore._recipe.recipe:930 Creating diagnostic task time_average_1986-2005/my_diagnostic 2024-03-21 13:31:44,975 UTC [1100078] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/ph 2024-03-21 13:31:44,975 UTC [1100078] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'preprocessor_time' task for variable 'ph' 2024-03-21 13:31:44,977 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc 2024-03-21 13:31:44,986 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:44,986 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gr, v20190815 2024-03-21 13:31:44,988 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc 2024-03-21 13:31:45,014 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:45,015 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gr, v20191108 2024-03-21 13:31:45,015 UTC [1100078] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/ph created. 2024-03-21 13:31:45,015 UTC [1100078] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/ph will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 13:31:45,015 UTC [1100078] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/sftlf 2024-03-21 13:31:45,015 UTC [1100078] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'sftlf' 2024-03-21 13:31:45,016 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,017 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftlf of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,017 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftlf, fx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 13:31:45,018 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,019 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftlf of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,019 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftlf, fx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 13:31:45,019 UTC [1100078] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/sftlf created. 2024-03-21 13:31:45,019 UTC [1100078] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/sftlf will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 13:31:45,019 UTC [1100078] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/sftof 2024-03-21 13:31:45,019 UTC [1100078] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'sftof' 2024-03-21 13:31:45,020 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,025 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftof of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,025 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftof, Ofx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 13:31:45,025 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,029 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftof of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,029 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftof, Ofx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 13:31:45,030 UTC [1100078] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/sftof created. 2024-03-21 13:31:45,030 UTC [1100078] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/sftof will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 13:31:45,030 UTC [1100078] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/areacello 2024-03-21 13:31:45,030 UTC [1100078] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'areacello' 2024-03-21 13:31:45,030 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,031 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable areacello of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,031 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: areacello, Ofx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20190815 2024-03-21 13:31:45,032 UTC [1100078] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 13:31:45,033 UTC [1100078] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable areacello of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,033 UTC [1100078] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: areacello, Ofx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 13:31:45,034 UTC [1100078] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/areacello created. 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:858 Linking tasks for diagnostic time_average_1986-2005 script my_diagnostic 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/ph matches ['time_average_1986-2005/ph'] 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/sftlf matches ['time_average_1986-2005/sftlf'] 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/sftof matches ['time_average_1986-2005/sftof'] 2024-03-21 13:31:45,034 UTC [1100078] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/areacello matches ['time_average_1986-2005/areacello'] 2024-03-21 13:31:45,034 UTC [1100078] INFO esmvalcore._recipe.recipe:1048 These tasks will be executed: time_average_1986-2005/ph, time_average_1986-2005/my_diagnostic, time_average_1986-2005/sftlf, time_average_1986-2005/areacello, time_average_1986-2005/sftof 2024-03-21 13:31:45,036 UTC [1100078] DEBUG esmvalcore._main:128 Recipe summary: DiagnosticTask: time_average_1986-2005/my_diagnostic script: ocean/diagnostic_maps.py settings: {'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/plots/time_average_1986-2005/my_diagnostic', 'profile_diagnostic': False, 'recipe': PosixPath('recipe_pH_NorESM2.yml'), 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic', 'script': 'my_diagnostic', 'version': '2.10.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/work/time_average_1986-2005/my_diagnostic'} ancestors: PreprocessingTask: time_average_1986-2005/ph order: ['climate_statistics', 'remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] settings: {'climate_statistics': {'operator': 'mean', 'period': 'full'}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] settings: {'climate_statistics': {'operator': 'mean', 'period': 'full'}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/sftlf order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/sftof order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/areacello order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc')}} ancestors: None 2024-03-21 13:31:45,040 UTC [1100078] INFO esmvalcore._recipe.recipe:1111 Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/recipe_pH_NorESM2_filled.yml 2024-03-21 13:31:45,040 UTC [1100078] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,040 UTC [1100078] INFO esmvalcore.config._dask:70 Using the Dask basic scheduler. 2024-03-21 13:31:45,040 UTC [1100078] INFO esmvalcore._task:760 Running 5 tasks using 4 processes 2024-03-21 13:31:45,075 UTC [1100253] INFO esmvalcore._task:261 Starting task time_average_1986-2005/ph in process [1100253] 2024-03-21 13:31:45,075 UTC [1100254] INFO esmvalcore._task:261 Starting task time_average_1986-2005/sftlf in process [1100254] 2024-03-21 13:31:45,075 UTC [1100255] INFO esmvalcore._task:261 Starting task time_average_1986-2005/sftof in process [1100255] 2024-03-21 13:31:45,075 UTC [1100256] INFO esmvalcore._task:261 Starting task time_average_1986-2005/areacello in process [1100256] 2024-03-21 13:31:45,086 UTC [1100254] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,087 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,088 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/sftlf_fx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,089 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,089 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,089 UTC [1100254] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,115 UTC [1100255] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,115 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,116 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/sftof_Ofx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,117 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,117 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,118 UTC [1100255] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,128 UTC [1100256] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,128 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,129 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/areacello_Ofx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20190815_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 13:31:45,130 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,130 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,130 UTC [1100256] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,165 UTC [1100253] DEBUG esmvalcore.preprocessor:651 Running block ['climate_statistics'] 2024-03-21 13:31:45,165 UTC [1100253] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 13:31:45,166 UTC [1100253] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,166 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,167 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gr_v20190815_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 13:31:45,169 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,169 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,169 UTC [1100253] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:45,172 UTC [1100078] INFO esmvalcore._task:793 Progress: 4 tasks running, 1 tasks waiting for ancestors, 0/5 done 2024-03-21 13:31:45,195 UTC [1100254] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,196 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,198 UTC [1100256] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,198 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,198 UTC [1100255] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,198 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,220 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,220 UTC [1100254] WARNING esmvalcore.cmor._fixes.fix:404 Long name changed from 'Percentage of the grid cell occupied by land (including lakes)' to 'Percentage of the Grid Cell Occupied by Land (Including Lakes)' (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,220 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 13:31:45,220 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,221 UTC [1100256] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,221 UTC [1100255] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,221 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,221 UTC [1100256] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,221 UTC [1100255] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,221 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,221 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,222 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 13:31:45,222 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,223 UTC [1100253] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:45,223 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,224 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,224 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,224 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 13:31:45,225 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,225 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,225 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,226 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc') 2024-03-21 13:31:45,227 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 13:31:45,228 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:45,228 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:45,228 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:45,227 UTC [1100254] DEBUG esmvalcore.preprocessor._io:452 Saving cube: land_area_fraction / (%) (latitude: 192; longitude: 288) Dimension coordinates: latitude x - longitude - x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacella' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'finite-volume grid with 0.9x1.25 degree lat/lon resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'LANDFRAC' original_units '1' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'atmos' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'fx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'sftlf' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 13:31:45,276 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,276 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,277 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,277 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,277 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,277 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,278 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 13:31:45,278 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 13:31:45,297 UTC [1100253] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:45,298 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,300 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,300 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,301 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 13:31:45,306 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,306 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,307 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 13:31:45,307 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,307 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,308 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,308 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 13:31:45,308 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,308 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 13:31:45,309 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,309 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,309 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,309 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,309 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,310 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc') 2024-03-21 13:31:45,310 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc') 2024-03-21 13:31:45,311 UTC [1100256] DEBUG esmvalcore.preprocessor._io:452 Saving cube: cell_area / (m2) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: sum Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 430335.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'parea' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:08e314340b9dd440c36c1b8e484514f4' title 'NorESM2-LM output prepared for CMIP6' variable_id 'areacello' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 13:31:45,311 UTC [1100255] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_area_fraction / (%) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 430335.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'pmask' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-LM output prepared for CMIP6' variable_id 'sftof' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 13:31:45,335 UTC [1100253] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-21 13:31:45,335 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-21 13:31:45,336 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) timerange = '1986/1987' 2024-03-21 13:31:45,341 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,343 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 13:31:45,343 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,344 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 13:31:45,344 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,345 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,345 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-21 13:31:45,346 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) operator = 'mean', period = 'full' 2024-03-21 13:31:45,473 UTC [1100254] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,473 UTC [1100255] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,473 UTC [1100256] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:45,473 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,474 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,474 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:45,474 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/sftlf_fx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,475 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/areacello_Ofx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,475 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/sftof_Ofx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,475 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,475 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,475 UTC [1100254] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,475 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,475 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:45,475 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,475 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:45,475 UTC [1100255] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,475 UTC [1100256] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,485 UTC [1100254] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,485 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,486 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,487 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,487 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,487 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,488 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 13:31:45,488 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,489 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,489 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,490 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 13:31:45,490 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,490 UTC [1100256] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,490 UTC [1100255] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 13:31:45,491 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,491 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:45,491 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,491 UTC [1100254] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,492 UTC [1100254] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc') 2024-03-21 13:31:45,492 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,492 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,493 UTC [1100255] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,493 UTC [1100256] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,493 UTC [1100255] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,493 UTC [1100256] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 13:31:45,492 UTC [1100254] DEBUG esmvalcore.preprocessor._io:452 Saving cube: land_area_fraction / (%) (latitude: 96; longitude: 144) Dimension coordinates: latitude x - longitude - x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1631-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 441650.0 cmor_version '3.6.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.32' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacella' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'finite-volume grid with 1.9x2.5 degree lat/lon resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '250 km' original_name 'LANDFRAC' original_units '1' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'atmos' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'fx' table_info 'Creation Date:(28 May 2020) MD5:1de8636e367d5d4cd561e0d9f5269385' title 'NorESM2-LM output prepared for CMIP6' variable_id 'sftlf' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 13:31:45,526 UTC [1100254] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/sftlf (priority 2) in 0:00:00.451173 2024-03-21 13:31:45,643 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,644 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:45,644 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,644 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,645 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 13:31:45,645 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 13:31:45,645 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:45,646 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 13:31:45,673 UTC [1100078] INFO esmvalcore._task:793 Progress: 3 tasks running, 1 tasks waiting for ancestors, 1/5 done 2024-03-21 13:31:45,674 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,675 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,675 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:45,675 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,676 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 13:31:45,676 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,676 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 13:31:45,677 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:45,677 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,677 UTC [1100256] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,677 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 13:31:45,677 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:45,678 UTC [1100256] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc') 2024-03-21 13:31:45,678 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:45,678 UTC [1100255] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,678 UTC [1100256] DEBUG esmvalcore.preprocessor._io:452 Saving cube: cell_area / (m2) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: sum Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'parea' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'areacello' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 13:31:45,679 UTC [1100255] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc') 2024-03-21 13:31:45,679 UTC [1100255] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_area_fraction / (%) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'pmask' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'sftof' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 13:31:45,734 UTC [1100253] DEBUG esmvalcore.preprocessor._time:842 climate_statistics changed dtype from float32 to float64, changing back 2024-03-21 13:31:45,734 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:45,736 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc') 2024-03-21 13:31:45,737 UTC [1100253] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_water_ph_reported_on_total_scale / (1) (depth: 70; cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: depth x - - cell index along second dimension - x - cell index along first dimension - - x Auxiliary coordinates: latitude - x x longitude - x x Scalar coordinates: time 1987-01-01 00:00:00, bound=(1986-01-01 00:00:00, 1988-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -91250 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:08e314340b9dd440c36c1b8e484514f4' title 'NorESM2-LM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 13:31:45,771 UTC [1100255] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/sftof (priority 3) in 0:00:00.696224 2024-03-21 13:31:45,771 UTC [1100256] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/areacello (priority 4) in 0:00:00.696190 2024-03-21 13:31:45,874 UTC [1100078] INFO esmvalcore._task:793 Progress: 2 tasks running, 1 tasks waiting for ancestors, 2/5 done 2024-03-21 13:31:45,974 UTC [1100078] INFO esmvalcore._task:793 Progress: 1 tasks running, 1 tasks waiting for ancestors, 3/5 done 2024-03-21 13:31:53,685 UTC [1100253] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 13:31:53,686 UTC [1100253] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 13:31:53,686 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 13:31:53,687 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gr_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 13:31:53,687 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 13:31:53,687 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) ignore_warnings = None 2024-03-21 13:31:53,687 UTC [1100253] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:53,738 UTC [1100253] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:53,738 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 13:31:53,740 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 13:31:53,740 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:53,740 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:53,741 UTC [1100253] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 13:31:53,806 UTC [1100253] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 13:31:53,806 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 13:31:53,807 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = 2024-03-21 13:31:53,807 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 13:31:53,808 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 13:31:53,847 UTC [1100253] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-21 13:31:53,847 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-21 13:31:53,847 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) timerange = '1986/1987' 2024-03-21 13:31:53,851 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 13:31:53,852 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 13:31:53,852 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 13:31:53,853 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 13:31:53,853 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 13:31:53,854 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 13:31:53,854 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-21 13:31:53,855 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) operator = 'mean', period = 'full' 2024-03-21 13:31:54,232 UTC [1100253] DEBUG esmvalcore.preprocessor._time:842 climate_statistics changed dtype from float32 to float64, changing back 2024-03-21 13:31:54,232 UTC [1100253] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 13:31:54,234 UTC [1100253] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc') 2024-03-21 13:31:54,234 UTC [1100253] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_water_ph_reported_on_total_scale / (1) (depth: 70; cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: depth x - - cell index along second dimension - x - cell index along first dimension - - x Auxiliary coordinates: latitude - x x longitude - x x Scalar coordinates: time 1987-01-01 00:00:00, bound=(1986-01-01 00:00:00, 1988-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -236885 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 13:32:02,074 UTC [1100253] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/ph (priority 1) in 0:00:16.999117 2024-03-21 13:32:02,085 UTC [1100078] INFO esmvalcore._task:793 Progress: 0 tasks running, 1 tasks waiting for ancestors, 4/5 done 2024-03-21 13:32:02,186 UTC [1100078] INFO esmvalcore._task:793 Progress: 1 tasks running, 0 tasks waiting for ancestors, 4/5 done 2024-03-21 13:32:02,189 UTC [1100254] INFO esmvalcore._task:261 Starting task time_average_1986-2005/my_diagnostic in process [1100254] 2024-03-21 13:32:02,191 UTC [1100254] INFO esmvalcore._task:502 Running command ['/projects/NS2980K/conda/esmvaltool2.10.0/bin/python', '/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py', '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic/settings.yml'] 2024-03-21 13:32:02,191 UTC [1100254] DEBUG esmvalcore._task:503 in environment {'MPLBACKEND': 'Agg'} 2024-03-21 13:32:02,191 UTC [1100254] DEBUG esmvalcore._task:505 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic 2024-03-21 13:32:02,191 UTC [1100254] INFO esmvalcore._task:506 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/work/time_average_1986-2005/my_diagnostic 2024-03-21 13:32:02,191 UTC [1100254] INFO esmvalcore._task:507 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/plots/time_average_1986-2005/my_diagnostic 2024-03-21 13:32:02,191 UTC [1100254] INFO esmvalcore._task:508 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic/log.txt 2024-03-21 13:32:02,191 UTC [1100254] INFO esmvalcore._task:518 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.10.0/bin/python /projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvaltool/diag_scripts/ocean/diagnostic_maps.py /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic/settings.yml 2024-03-21 13:32:06,213 UTC [1100254] INFO esmvalcore._task:128 Maximum memory used (estimate): 0.3 GB 2024-03-21 13:32:06,214 UTC [1100254] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-21 13:32:06,454 UTC [1100078] INFO esmvalcore._task:128 Maximum memory used (estimate): 7.9 GB 2024-03-21 13:32:06,454 UTC [1100078] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-21 13:32:06,455 UTC [1100078] ERROR esmvalcore._main:530 Program terminated abnormally, see stack trace below for more information: multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) ^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 816, in _run_task output_files = task.run() ^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 264, in run self.output_files = self._run(input_files) ^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 595, in _run raise DiagnosticError( esmvalcore._task.DiagnosticError: Diagnostic script ocean/diagnostic_maps.py failed with return code 1. See the log in /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic/log.txt """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 518, in run fire.Fire(ESMValTool()) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 141, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 475, in _Fire component, remaining_args = _CallAndUpdateTrace( ^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 691, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 405, in run self._run(recipe, session) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 447, in _run process_recipe(recipe_file=recipe, session=session) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 130, in process_recipe recipe.run() File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_recipe/recipe.py", line 1075, in run self.tasks.run(max_parallel_tasks=self.session['max_parallel_tasks']) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 738, in run self._run_parallel(address, max_parallel_tasks) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 782, in _run_parallel _copy_results(task, running[task]) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 805, in _copy_results task.output_files, task.products = future.get() ^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/multiprocessing/pool.py", line 774, in get raise self._value esmvalcore._task.DiagnosticError: Diagnostic script ocean/diagnostic_maps.py failed with return code 1. See the log in /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_133143/run/time_average_1986-2005/my_diagnostic/log.txt 2024-03-21 13:32:06,457 UTC [1100078] INFO esmvalcore._main:534 If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.