2024-03-21 12:09:35,060 UTC [1081294] INFO esmvalcore._main:492 ______________________________________________________________________ _____ ____ __ ____ __ _ _____ _ | ____/ ___|| \/ \ \ / /_ _| |_ _|__ ___ | | | _| \___ \| |\/| |\ \ / / _` | | | |/ _ \ / _ \| | | |___ ___) | | | | \ V / (_| | | | | (_) | (_) | | |_____|____/|_| |_| \_/ \__,_|_| |_|\___/ \___/|_| ______________________________________________________________________ ESMValTool - Earth System Model Evaluation Tool. http://www.esmvaltool.org CORE DEVELOPMENT TEAM AND CONTACTS: Birgit Hassler (Co-PI; DLR, Germany - birgit.hassler@dlr.de) Alistair Sellar (Co-PI; Met Office, UK - alistair.sellar@metoffice.gov.uk) Bouwe Andela (Netherlands eScience Center, The Netherlands - b.andela@esciencecenter.nl) Lee de Mora (PML, UK - ledm@pml.ac.uk) Niels Drost (Netherlands eScience Center, The Netherlands - n.drost@esciencecenter.nl) Veronika Eyring (DLR, Germany - veronika.eyring@dlr.de) Bettina Gier (UBremen, Germany - gier@uni-bremen.de) Remi Kazeroni (DLR, Germany - remi.kazeroni@dlr.de) Nikolay Koldunov (AWI, Germany - nikolay.koldunov@awi.de) Axel Lauer (DLR, Germany - axel.lauer@dlr.de) Saskia Loosveldt-Tomas (BSC, Spain - saskia.loosveldt@bsc.es) Ruth Lorenz (ETH Zurich, Switzerland - ruth.lorenz@env.ethz.ch) Benjamin Mueller (LMU, Germany - b.mueller@iggf.geo.uni-muenchen.de) Valeriu Predoi (URead, UK - valeriu.predoi@ncas.ac.uk) Mattia Righi (DLR, Germany - mattia.righi@dlr.de) Manuel Schlund (DLR, Germany - manuel.schlund@dlr.de) Breixo Solino Fernandez (DLR, Germany - breixo.solinofernandez@dlr.de) Javier Vegas-Regidor (BSC, Spain - javier.vegas@bsc.es) Klaus Zimmermann (SMHI, Sweden - klaus.zimmermann@smhi.se) For further help, please read the documentation at http://docs.esmvaltool.org. Have fun! 2024-03-21 12:09:35,060 UTC [1081294] INFO esmvalcore._main:493 Package versions 2024-03-21 12:09:35,060 UTC [1081294] INFO esmvalcore._main:494 ---------------- 2024-03-21 12:09:35,060 UTC [1081294] INFO esmvalcore._main:495 ESMValCore: 2.10.0 2024-03-21 12:09:35,061 UTC [1081294] INFO esmvalcore._main:497 ESMValTool: 2.10.0 2024-03-21 12:09:35,061 UTC [1081294] INFO esmvalcore._main:498 ---------------- 2024-03-21 12:09:35,061 UTC [1081294] INFO esmvalcore._main:499 Using config file /nird/home/tomast/.esmvaltool/config-user.yml 2024-03-21 12:09:35,061 UTC [1081294] INFO esmvalcore._main:500 Writing program log files to: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/main_log.txt /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/main_log_debug.txt 2024-03-21 12:09:37,525 UTC [1081294] INFO esmvalcore.config._esgf_pyclient:116 Using default ESGF configuration, configuration file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml not present. 2024-03-21 12:09:37,526 UTC [1081294] WARNING esmvalcore.config._esgf_pyclient:181 ESGF credentials missing, only data that is accessible without logging in will be available. See https://esgf.github.io/esgf-user-support/user_guide.html for instructions on how to create an account if you do not have one yet. Next, configure your system so esmvaltool can use your credentials. This can be done using the keyring package, or you can just enter them in /nird/home/tomast/.esmvaltool/esgf-pyclient.yml. keyring ======= First install the keyring package (requires a supported backend, see https://pypi.org/project/keyring/): $ pip install keyring Next, set your username and password by running the commands: $ keyring set ESGF hostname $ keyring set ESGF username $ keyring set ESGF password To check that you entered your credentials correctly, run: $ keyring get ESGF hostname $ keyring get ESGF username $ keyring get ESGF password configuration file ================== You can store the hostname, username, and password or your OpenID account in a plain text in the file /nird/home/tomast/.esmvaltool/esgf-pyclient.yml like this: logon: hostname: "your-hostname" username: "your-username" password: "your-password" or your can configure an interactive log in: logon: interactive: true Note that storing your password in plain text in the configuration file is less secure. On shared systems, make sure the permissions of the file are set so only you can read it, i.e. $ ls -l /nird/home/tomast/.esmvaltool/esgf-pyclient.yml shows permissions -rw-------. 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:91 Starting the Earth System Model Evaluation Tool at time: 2024-03-21 12:09:39 UTC 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:95 ---------------------------------------------------------------------- 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:96 RECIPE = /projects/NS2980K/home/tomast/ESMValTool/recipes-2.10.0/data_extraction/recipe_pH_NorESM2.yml 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:97 RUNDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:98 WORKDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/work 2024-03-21 12:09:39,898 UTC [1081294] INFO esmvalcore._main:99 PREPROCDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc 2024-03-21 12:09:39,899 UTC [1081294] INFO esmvalcore._main:100 PLOTDIR = /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/plots 2024-03-21 12:09:39,899 UTC [1081294] INFO esmvalcore._main:101 ---------------------------------------------------------------------- 2024-03-21 12:09:39,899 UTC [1081294] INFO esmvalcore._main:104 Running tasks using at most 4 processes 2024-03-21 12:09:39,899 UTC [1081294] INFO esmvalcore._main:106 If your system hangs during execution, it may not have enough memory for keeping this number of tasks in memory. 2024-03-21 12:09:39,899 UTC [1081294] INFO esmvalcore._main:109 If you experience memory problems, try reducing 'max_parallel_tasks' in your user configuration file. 2024-03-21 12:09:39,899 UTC [1081294] WARNING esmvalcore.config._dask:18 Using the Dask basic scheduler. This may lead to slow computations and out-of-memory errors. Note that the basic scheduler may still be the best choice for preprocessor functions that are not lazy. In that case, you can safely ignore this warning. See https://docs.esmvaltool.org/projects/ESMValCore/en/latest/quickstart/configure.html#dask-distributed-configuration for more information. 2024-03-21 12:09:39,900 UTC [1081294] DEBUG esmvalcore._recipe.check:54 Checking recipe against schema /projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_recipe/recipe_schema.yml 2024-03-21 12:09:39,912 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable ph in diagnostic time_average_1986-2005 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-LM, historical, r1i1p1f1, gr 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: ph, Omon, CMIP6, NorESM2-MM, historical, r1i1p1f1, gr 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable sftlf in diagnostic time_average_1986-2005 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftlf, fx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftlf, fx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable sftof in diagnostic time_average_1986-2005 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftof, Ofx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: sftof, Ofx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:343 Populating list of datasets for variable areacello in diagnostic time_average_1986-2005 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: areacello, Ofx, CMIP6, NorESM2-LM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,913 UTC [1081294] DEBUG esmvalcore._recipe.to_datasets:367 Found Dataset: areacello, Ofx, CMIP6, NorESM2-MM, historical, r1i1p1f1, gn 2024-03-21 12:09:39,914 UTC [1081294] DEBUG esmvalcore._recipe.recipe:781 Retrieving diagnostics from recipe 2024-03-21 12:09:39,914 UTC [1081294] DEBUG esmvalcore._recipe.recipe:809 Setting script for diagnostic time_average_1986-2005 2024-03-21 12:09:39,914 UTC [1081294] INFO esmvalcore._recipe.recipe:999 Creating tasks from recipe 2024-03-21 12:09:39,914 UTC [1081294] INFO esmvalcore._recipe.recipe:1008 Creating tasks for diagnostic time_average_1986-2005 2024-03-21 12:09:39,914 UTC [1081294] INFO esmvalcore._recipe.recipe:930 Creating diagnostic task time_average_1986-2005/my_diagnostic 2024-03-21 12:09:39,915 UTC [1081294] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/ph 2024-03-21 12:09:39,915 UTC [1081294] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'preprocessor_time' task for variable 'ph' 2024-03-21 12:09:39,974 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr*.nc 2024-03-21 12:09:40,034 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:40,034 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gr, v20190815 2024-03-21 12:09:40,035 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/*/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr*.nc 2024-03-21 12:09:40,054 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable ph of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:40,054 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: ph, Omon, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gr, v20191108 2024-03-21 12:09:40,055 UTC [1081294] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/ph created. 2024-03-21 12:09:40,055 UTC [1081294] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/ph will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 12:09:40,055 UTC [1081294] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/sftlf 2024-03-21 12:09:40,055 UTC [1081294] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'sftlf' 2024-03-21 12:09:40,055 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,061 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftlf of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,061 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftlf, fx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 12:09:40,061 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/*/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,065 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftlf of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,065 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftlf, fx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 12:09:40,065 UTC [1081294] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/sftlf created. 2024-03-21 12:09:40,065 UTC [1081294] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/sftlf will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 12:09:40,065 UTC [1081294] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/sftof 2024-03-21 12:09:40,065 UTC [1081294] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'sftof' 2024-03-21 12:09:40,066 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,071 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftof of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,071 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftof, Ofx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 12:09:40,071 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/*/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,074 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable sftof of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,074 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: sftof, Ofx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 12:09:40,075 UTC [1081294] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/sftof created. 2024-03-21 12:09:40,075 UTC [1081294] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/sftof will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 12:09:40,075 UTC [1081294] INFO esmvalcore._recipe.recipe:983 Creating preprocessor task time_average_1986-2005/areacello 2024-03-21 12:09:40,075 UTC [1081294] INFO esmvalcore._recipe.recipe:653 Creating preprocessor 'default' task for variable 'areacello' 2024-03-21 12:09:40,075 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,078 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable areacello of dataset NorESM2-LM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,078 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: areacello, Ofx, CMIP6, NorESM2-LM, CMIP, historical, r1i1p1f1, gn, v20190815 2024-03-21 12:09:40,078 UTC [1081294] DEBUG esmvalcore.local:444 Looking for files matching: /projects/NS2980K-datalake/shared/external/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9252K/KeyCLIM_CMOR/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /projects/NS9560K-datalake/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc /scratch/tomast/ESGF/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/*/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn*.nc 2024-03-21 12:09:40,081 UTC [1081294] DEBUG esmvalcore._recipe.recipe:263 Using input files for variable areacello of dataset NorESM2-MM: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,081 UTC [1081294] INFO esmvalcore._recipe.recipe:520 Found input files for Dataset: areacello, Ofx, CMIP6, NorESM2-MM, CMIP, historical, r1i1p1f1, gn, v20191108 2024-03-21 12:09:40,081 UTC [1081294] INFO esmvalcore._recipe.recipe:677 PreprocessingTask time_average_1986-2005/areacello created. 2024-03-21 12:09:40,081 UTC [1081294] DEBUG esmvalcore._recipe.recipe:678 PreprocessingTask time_average_1986-2005/areacello will create the files: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 12:09:40,081 UTC [1081294] DEBUG esmvalcore._recipe.recipe:858 Linking tasks for diagnostic time_average_1986-2005 script my_diagnostic 2024-03-21 12:09:40,081 UTC [1081294] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/ph matches ['time_average_1986-2005/ph'] 2024-03-21 12:09:40,082 UTC [1081294] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/sftlf matches ['time_average_1986-2005/sftlf'] 2024-03-21 12:09:40,082 UTC [1081294] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/sftof matches ['time_average_1986-2005/sftof'] 2024-03-21 12:09:40,082 UTC [1081294] DEBUG esmvalcore._recipe.recipe:867 Pattern time_average_1986-2005/areacello matches ['time_average_1986-2005/areacello'] 2024-03-21 12:09:40,082 UTC [1081294] INFO esmvalcore._recipe.recipe:1048 These tasks will be executed: time_average_1986-2005/my_diagnostic, time_average_1986-2005/sftof, time_average_1986-2005/sftlf, time_average_1986-2005/ph, time_average_1986-2005/areacello 2024-03-21 12:09:40,083 UTC [1081294] DEBUG esmvalcore._main:128 Recipe summary: DiagnosticTask: time_average_1986-2005/my_diagnostic script: /projects/NS2980K/home/tomast/ESMValTool/diag_scripts/2.10.0/my_diagnostic/extract_ocean_field.py settings: {'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'log_level': 'info', 'output_file_type': 'png', 'plot_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/plots/time_average_1986-2005/my_diagnostic', 'profile_diagnostic': False, 'recipe': PosixPath('recipe_pH_NorESM2.yml'), 'run_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic', 'script': 'my_diagnostic', 'version': '2.10.0', 'work_dir': '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/work/time_average_1986-2005/my_diagnostic'} ancestors: PreprocessingTask: time_average_1986-2005/ph order: ['climate_statistics', 'remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] settings: {'climate_statistics': {'operator': 'mean', 'period': 'full'}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] settings: {'climate_statistics': {'operator': 'mean', 'period': 'full'}, 'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/sftlf order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/sftof order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc')}} ancestors: None PreprocessingTask: time_average_1986-2005/areacello order: ['remove_supplementary_variables', 'save'] PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc')}} PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc input files: [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] settings: {'remove_supplementary_variables': {}, 'save': {'compress': False, 'filename': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc')}} ancestors: None 2024-03-21 12:09:40,088 UTC [1081294] INFO esmvalcore._recipe.recipe:1111 Wrote recipe with version numbers and wildcards to: file:///projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/recipe_pH_NorESM2_filled.yml 2024-03-21 12:09:40,088 UTC [1081294] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:40,088 UTC [1081294] INFO esmvalcore.config._dask:70 Using the Dask basic scheduler. 2024-03-21 12:09:40,088 UTC [1081294] INFO esmvalcore._task:760 Running 5 tasks using 4 processes 2024-03-21 12:09:40,145 UTC [1081467] INFO esmvalcore._task:261 Starting task time_average_1986-2005/ph in process [1081467] 2024-03-21 12:09:40,145 UTC [1081468] INFO esmvalcore._task:261 Starting task time_average_1986-2005/sftlf in process [1081468] 2024-03-21 12:09:40,145 UTC [1081469] INFO esmvalcore._task:261 Starting task time_average_1986-2005/sftof in process [1081469] 2024-03-21 12:09:40,145 UTC [1081470] INFO esmvalcore._task:261 Starting task time_average_1986-2005/areacello in process [1081470] 2024-03-21 12:09:40,197 UTC [1081468] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:40,198 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:40,198 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/sftlf_fx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,204 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:40,204 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:40,204 UTC [1081468] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,210 UTC [1081469] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:40,210 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:40,211 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/sftof_Ofx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,213 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:40,214 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:40,214 UTC [1081469] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,214 UTC [1081470] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:40,214 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:40,215 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/areacello_Ofx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20190815_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 12:09:40,217 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:40,217 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:40,217 UTC [1081470] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,240 UTC [1081467] DEBUG esmvalcore.preprocessor:651 Running block ['climate_statistics'] 2024-03-21 12:09:40,240 UTC [1081467] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 12:09:40,241 UTC [1081467] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:40,241 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:40,242 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gr_v20190815_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 12:09:40,242 UTC [1081294] INFO esmvalcore._task:793 Progress: 4 tasks running, 1 tasks waiting for ancestors, 0/5 done 2024-03-21 12:09:40,244 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:40,244 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:40,244 UTC [1081467] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:40,581 UTC [1081468] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,581 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:40,583 UTC [1081470] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,583 UTC [1081469] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:40,583 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:40,583 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:40,601 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 12:09:40,601 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,601 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,601 UTC [1081470] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:40,601 UTC [1081469] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:40,602 UTC [1081470] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:40,602 UTC [1081469] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:40,602 UTC [1081468] WARNING esmvalcore.cmor._fixes.fix:404 Long name changed from 'Percentage of the grid cell occupied by land (including lakes)' to 'Percentage of the Grid Cell Occupied by Land (Including Lakes)' (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:40,602 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:40,603 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:40,603 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:40,604 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 12:09:40,604 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:40,606 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,606 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:40,606 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 12:09:40,607 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:40,607 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:40,607 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:40,608 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc') 2024-03-21 12:09:40,609 UTC [1081468] DEBUG esmvalcore.preprocessor._io:452 Saving cube: land_area_fraction / (%) (latitude: 192; longitude: 288) Dimension coordinates: latitude x - longitude - x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacella' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'finite-volume grid with 0.9x1.25 degree lat/lon resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'LANDFRAC' original_units '1' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'atmos' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'fx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'sftlf' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-MM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 12:09:40,647 UTC [1081467] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:40,648 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:40,651 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 12:09:40,652 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:40,652 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:40,652 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:40,656 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:40,657 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:40,657 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:40,658 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:40,658 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 12:09:40,659 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:40,659 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:40,660 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 12:09:40,689 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:40,690 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:40,691 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:40,691 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:40,691 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20190815' 2024-03-21 12:09:40,691 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:40,692 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 12:09:40,692 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:40,692 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 12:09:40,692 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:40,693 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:40,693 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:40,693 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:40,693 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:40,694 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc') 2024-03-21 12:09:40,694 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Ofx/areacello/gn/v20190815/areacello_Ofx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc') 2024-03-21 12:09:40,695 UTC [1081469] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_area_fraction / (%) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 430335.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'pmask' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-LM output prepared for CMIP6' variable_id 'sftof' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 12:09:40,695 UTC [1081470] DEBUG esmvalcore.preprocessor._io:452 Saving cube: cell_area / (m2) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: sum Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 430335.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'parea' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:08e314340b9dd440c36c1b8e484514f4' title 'NorESM2-LM output prepared for CMIP6' variable_id 'areacello' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-LM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 12:09:40,719 UTC [1081467] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:40,719 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:40,720 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = 2024-03-21 12:09:40,720 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:40,721 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 12:09:40,756 UTC [1081467] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-21 12:09:40,756 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-21 12:09:40,757 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) timerange = '1986/1987' 2024-03-21 12:09:40,762 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:40,763 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20190815' 2024-03-21 12:09:40,764 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:40,765 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 12:09:40,765 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:40,766 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:40,766 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-21 12:09:40,766 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) operator = 'mean', period = 'full' 2024-03-21 12:09:41,141 UTC [1081467] DEBUG esmvalcore.preprocessor._time:842 climate_statistics changed dtype from float32 to float64, changing back 2024-03-21 12:09:41,141 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:41,143 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/Omon/ph/gr/v20190815/ph_Omon_NorESM2-LM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc') 2024-03-21 12:09:41,144 UTC [1081467] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_water_ph_reported_on_total_scale / (1) (depth: 70; cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: depth x - - cell index along second dimension - x - cell index along first dimension - - x Auxiliary coordinates: latitude - x x longitude - x x Scalar coordinates: time 1987-01-01 00:00:00, bound=(1986-01-01 00:00:00, 1988-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1600-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -91250 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:08e314340b9dd440c36c1b8e484514f4' title 'NorESM2-LM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-LM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 12:09:41,179 UTC [1081469] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:41,179 UTC [1081470] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:41,179 UTC [1081468] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:41,179 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:41,179 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:41,179 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:41,180 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/sftof_Ofx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,180 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/areacello_Ofx_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,180 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/sftlf_fx_CMIP6_NorESM2-LM_CMIP_historical_r1i1p1f1_gn_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,181 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:41,181 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:41,181 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:41,181 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:41,181 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:41,181 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:41,181 UTC [1081470] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,181 UTC [1081469] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,181 UTC [1081468] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,191 UTC [1081468] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,191 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:41,192 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,193 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:41,194 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:41,194 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:41,194 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 12:09:41,194 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:41,196 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'fx', grid = 'gn', dataset = 'NorESM2-LM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftlf', variable_group = 'sftlf', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 0, alias = 'NorESM2-LM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftlf', standard_name = 'land_area_fraction', long_name = 'Percentage of the Grid Cell Occupied by Land (Including Lakes)', units = '%', modeling_realm = ['atmos'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,196 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:41,196 UTC [1081469] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,196 UTC [1081470] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc 2024-03-21 12:09:41,196 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:41,196 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:41,196 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'fx', frequency = 'fx', short_name = 'sftlf' 2024-03-21 12:09:41,197 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:41,197 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:41,197 UTC [1081468] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:41,198 UTC [1081468] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-LM/historical/r1i1p1f1/fx/sftlf/gn/v20191108/sftlf_fx_NorESM2-LM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc') 2024-03-21 12:09:41,198 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,198 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,198 UTC [1081470] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:41,198 UTC [1081469] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:41,198 UTC [1081470] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:41,198 UTC [1081469] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc) 2024-03-21 12:09:41,198 UTC [1081468] DEBUG esmvalcore.preprocessor._io:452 Saving cube: land_area_fraction / (%) (latitude: 96; longitude: 144) Dimension coordinates: latitude x - longitude - x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1631-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 441650.0 cmor_version '3.6.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.32' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacella' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-LM.historical.none.r1 ...' grid 'finite-volume grid with 1.9x2.5 degree lat/lon resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-LM' nominal_resolution '250 km' original_name 'LANDFRAC' original_units '1' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-LM' parent_sub_experiment_id 'none' parent_time_units 'days since 0421-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'atmos' run_variant 'N/A' source 'NorESM2-LM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (2 degree resolution; ...' source_id 'NorESM2-LM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'fx' table_info 'Creation Date:(28 May 2020) MD5:1de8636e367d5d4cd561e0d9f5269385' title 'NorESM2-LM output prepared for CMIP6' variable_id 'sftlf' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftlf/CMIP6_NorESM2-LM_fx_historical_r1i1p1f1_sftlf_gn.nc 2024-03-21 12:09:41,272 UTC [1081468] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/sftlf (priority 2) in 0:00:01.126530 2024-03-21 12:09:41,353 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:41,354 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:41,354 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:41,355 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 12:09:41,361 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:41,362 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = 2024-03-21 12:09:41,362 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:41,363 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 12:09:41,387 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:41,389 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'areacello', variable_group = 'areacello', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'areacello', standard_name = 'cell_area', long_name = 'Grid-Cell Area for Ocean Variables', units = 'm2', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,389 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:41,390 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'areacello' 2024-03-21 12:09:41,390 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:41,390 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:41,391 UTC [1081470] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:41,392 UTC [1081470] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/areacello/gn/v20191108/areacello_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc') 2024-03-21 12:09:41,392 UTC [1081470] DEBUG esmvalcore.preprocessor._io:452 Saving cube: cell_area / (m2) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: sum Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'parea' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'areacello' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/areacello/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_areacello_gn.nc 2024-03-21 12:09:41,397 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:41,399 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), mip = 'Ofx', grid = 'gn', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'sftof', variable_group = 'sftof', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'sftof', standard_name = 'sea_area_fraction', long_name = 'Sea Area Percentage', units = '%', modeling_realm = ['ocean'], frequency = 'fx', version = 'v20191108' 2024-03-21 12:09:41,399 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:41,400 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Ofx', frequency = 'fx', short_name = 'sftof' 2024-03-21 12:09:41,400 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:41,401 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:41,401 UTC [1081469] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:41,402 UTC [1081469] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Ofx/sftof/gn/v20191108/sftof_Ofx_NorESM2-MM_historical_r1i1p1f1_gn.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc') 2024-03-21 12:09:41,402 UTC [1081469] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_area_fraction / (%) (cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: cell index along second dimension x - cell index along first dimension - x Auxiliary coordinates: latitude x x longitude x x Cell methods: 0 area: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child 0.0 branch_time_in_parent 438000.0 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello' forcing_index 1 frequency 'fx' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution' grid_label 'gn' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'pmask' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 0001-01-01' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocean' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Ofx' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'sftof' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/sftof/CMIP6_NorESM2-MM_Ofx_historical_r1i1p1f1_sftof_gn.nc 2024-03-21 12:09:41,444 UTC [1081294] INFO esmvalcore._task:793 Progress: 3 tasks running, 1 tasks waiting for ancestors, 1/5 done 2024-03-21 12:09:41,497 UTC [1081470] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/areacello (priority 4) in 0:00:01.351187 2024-03-21 12:09:41,500 UTC [1081469] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/sftof (priority 3) in 0:00:01.354922 2024-03-21 12:09:41,644 UTC [1081294] INFO esmvalcore._task:793 Progress: 1 tasks running, 1 tasks waiting for ancestors, 3/5 done 2024-03-21 12:09:49,014 UTC [1081467] DEBUG esmvalcore.preprocessor:658 Applying single-model steps to PreprocessorFile: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 12:09:49,014 UTC [1081467] DEBUG esmvalcore.esgf._download:535 All required data is available locally, not downloading anything. 2024-03-21 12:09:49,015 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_file 2024-03-21 12:09:49,015 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_file' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) output_dir = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/fixed_files/ph_Omon_CMIP6_NorESM2-MM_CMIP_historical_r1i1p1f1_gr_v20191108_'), add_unique_suffix = True, session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 12:09:49,016 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step load 2024-03-21 12:09:49,016 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'load' on the data LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc') loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) ignore_warnings = None 2024-03-21 12:09:49,016 UTC [1081467] DEBUG esmvalcore.preprocessor._io:145 Loading: /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:49,128 UTC [1081467] DEBUG esmvalcore.preprocessor._io:176 Done with loading /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:49,128 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_metadata 2024-03-21 12:09:49,130 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_metadata' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 12:09:49,130 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional longitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'longitude' to 'lon' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:49,131 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Multidimensional latitude coordinate is not set in CMOR standard, ESMValTool will change the original value of 'latitude' to 'lat' to match the one-dimensional case (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:49,131 UTC [1081467] DEBUG esmvalcore.cmor._fixes.fix:399 Generic level coordinate olevel will be checked against depth_coord coordinate information (for file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc) 2024-03-21 12:09:49,207 UTC [1081467] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file /projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc 2024-03-21 12:09:49,207 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step concatenate 2024-03-21 12:09:49,209 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'concatenate' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = 2024-03-21 12:09:49,209 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_metadata 2024-03-21 12:09:49,210 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_metadata' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 12:09:49,247 UTC [1081467] DEBUG esmvalcore.cmor.check:270 There were metadata changes in variable ph: Generic level coordinate olevel will be checked against depth_coord coordinate information loaded from file 2024-03-21 12:09:49,247 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step clip_timerange 2024-03-21 12:09:49,248 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'clip_timerange' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) timerange = '1986/1987' 2024-03-21 12:09:49,252 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step fix_data 2024-03-21 12:09:49,253 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'fix_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , session = Session({'auxiliary_data_dir': PosixPath('/projects/NS9560K-datalake/ESGF/auxiliary_data'), 'check_level': , 'compress_netcdf': False, 'config_developer_file': PosixPath('/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/config-developer.yml'), 'config_file': PosixPath('/nird/home/tomast/.esmvaltool/config-user.yml'), 'diagnostics': None, 'download_dir': PosixPath('/scratch/tomast/ESGF'), 'drs': {'CMIP3': 'DKRZ', 'CMIP5': 'DKRZ', 'CMIP6': 'DKRZ', 'CORDEX': 'DKRZ', 'OBS': 'default', 'OBS6': 'default', 'ana4mips': 'default', 'native6': 'default', 'obs4MIPs': 'default'}, 'exit_on_warning': False, 'extra_facets_dir': (), 'log_level': 'info', 'max_datasets': None, 'max_parallel_tasks': 4, 'max_years': None, 'output_dir': PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output'), 'output_file_type': 'png', 'profile_diagnostic': False, 'remove_preproc_dir': True, 'resume_from': [], 'rootpath': {'CMIP3': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip3')], 'CMIP5': [PosixPath('/projects/NS9560K-datalake/ESGF/cmip5/output1'), PosixPath('/projects/NS9034K/CMIP5/output1'), PosixPath('/scratch/tomast/ESGF/cmip5/output1')], 'CMIP6': [PosixPath('/projects/NS9560K-datalake/ESGF/CMIP6'), PosixPath('/projects/NS9034K/CMIP6'), PosixPath('/projects/NS2980K-datalake/shared/external/CMIP6'), PosixPath('/projects/NS9252K/KeyCLIM_CMOR'), PosixPath('/scratch/tomast/ESGF/CMIP6')], 'OBS': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'OBS6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obsdata')], 'RAWOBS': [PosixPath('/projects/NS9560K-datalake/ESGF/rawdata/obs'), PosixPath('/scratch/tomast/ESGF/rawdata/obs')], 'ana4mips': [PosixPath('/projects/NS9560K-datalake/ESGF/ana4mips'), PosixPath('/scratch/tomast/ESGF/ana4mips')], 'default': [PosixPath('/scratch/tomast/ESGF/obsdata')], 'native6': [PosixPath('/projects/NS9560K-datalake/ESGF/obsdata/native6'), PosixPath('/scratch/tomast/ESGF/obsdata/native6')], 'obs4MIPs': [PosixPath('/projects/NS9560K-datalake/ESGF/obs4MIPs'), PosixPath('/projects/NS9560K-datalake/ESGF/obsdata'), PosixPath('/scratch/tomast/ESGF/obs4MIPs')]}, 'run_diagnostic': True, 'save_intermediary_cubes': False, 'search_esgf': 'when_missing', 'skip_nonexistent': False, 'write_ncl_interface': False}), preprocessor = 'preprocessor_time', mip = 'Omon', grid = 'gr', dataset = 'NorESM2-MM', project = 'CMIP6', exp = 'historical', ensemble = 'r1i1p1f1', short_name = 'ph', timerange = '1986/1987', variable_group = 'ph', diagnostic = 'time_average_1986-2005', recipe_dataset_index = 1, alias = 'NorESM2-MM', institute = ['NCC'], activity = 'CMIP', original_short_name = 'ph', standard_name = 'sea_water_ph_reported_on_total_scale', long_name = 'pH', units = '1', modeling_realm = ['ocnBgchem'], frequency = 'mon', version = 'v20191108' 2024-03-21 12:09:49,253 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step cmor_check_data 2024-03-21 12:09:49,254 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'cmor_check_data' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) check_level = , cmor_table = 'CMIP6', mip = 'Omon', frequency = 'mon', short_name = 'ph' 2024-03-21 12:09:49,254 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step add_supplementary_variables 2024-03-21 12:09:49,255 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'add_supplementary_variables' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) supplementary_cubes = [] 2024-03-21 12:09:49,255 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step climate_statistics 2024-03-21 12:09:49,256 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'climate_statistics' on the data loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) operator = 'mean', period = 'full' 2024-03-21 12:09:49,633 UTC [1081467] DEBUG esmvalcore.preprocessor._time:842 climate_statistics changed dtype from float32 to float64, changing back 2024-03-21 12:09:49,633 UTC [1081467] DEBUG esmvalcore.preprocessor:364 Running preprocessor step save 2024-03-21 12:09:49,636 UTC [1081467] DEBUG esmvalcore.preprocessor:318 Running preprocessor function 'save' on the data [] loaded from original input file(s) [LocalFile('/projects/NS9034K/CMIP6/CMIP/NCC/NorESM2-MM/historical/r1i1p1f1/Omon/ph/gr/v20191108/ph_Omon_NorESM2-MM_historical_r1i1p1f1_gr_198001-198912.nc')] with function argument(s) compress = False, filename = PosixPath('/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc') 2024-03-21 12:09:49,636 UTC [1081467] DEBUG esmvalcore.preprocessor._io:452 Saving cube: sea_water_ph_reported_on_total_scale / (1) (depth: 70; cell index along second dimension: 385; cell index along first dimension: 360) Dimension coordinates: depth x - - cell index along second dimension - x - cell index along first dimension - - x Auxiliary coordinates: latitude - x x longitude - x x Scalar coordinates: time 1987-01-01 00:00:00, bound=(1986-01-01 00:00:00, 1988-01-01 00:00:00) Cell methods: 0 area: mean where sea 1 time: mean 2 time: mean Attributes: Conventions 'CF-1.7 CMIP-6.2' activity_id 'CMIP' branch_method 'Hybrid-restart from year 1200-01-01 of piControl' branch_time 0.0 branch_time_in_child -18250 branch_time_in_parent -236885 cmor_version '3.5.0' contact 'Please send any requests or bug reports to noresm-ncc@met.no.' data_specs_version '01.00.31' experiment 'all-forcing simulation of the recent past' experiment_id 'historical' external_variables 'areacello volcello' forcing_index 1 frequency 'mon' further_info_url 'https://furtherinfo.es-doc.org/CMIP6.NCC.NorESM2-MM.historical.none.r1 ...' grid 'tripolar grid with 1deg nominal resolution, interpolated to z-levels' grid_label 'gr' initialization_index 1 institution 'NorESM Climate modeling Consortium consisting of CICERO (Center for International ...' institution_id 'NCC' license 'CMIP6 model data produced by NCC is licensed under a Creative Commons Attribution ...' mip_era 'CMIP6' model_id 'NorESM2-MM' nominal_resolution '100 km' original_name 'phlvl' parent_activity_id 'CMIP' parent_experiment_id 'piControl' parent_mip_era 'CMIP6' parent_source_id 'NorESM2-MM' parent_sub_experiment_id 'none' parent_time_units 'days since 1850-1-1 00:00:00' parent_variant_label 'r1i1p1f1' physics_index 1 product 'model-output' realization_index 1 realm 'ocnBgchem' run_variant 'N/A' source 'NorESM2-MM (2017): \naerosol: OsloAero\natmos: CAM-OSLO (1 degree resolution; ...' source_id 'NorESM2-MM' source_type 'AOGCM AER BGC' sub_experiment 'none' sub_experiment_id 'none' table_id 'Omon' table_info 'Creation Date:(24 July 2019) MD5:0bb394a356ef9d214d027f1aca45853e' title 'NorESM2-MM output prepared for CMIP6' variable_id 'ph' variant_label 'r1i1p1f1' with lazy data to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/preproc/time_average_1986-2005/ph/CMIP6_NorESM2-MM_Omon_historical_r1i1p1f1_ph_gr_1986-1987.nc 2024-03-21 12:09:57,509 UTC [1081467] INFO esmvalcore._task:266 Successfully completed task time_average_1986-2005/ph (priority 1) in 0:00:17.364188 2024-03-21 12:09:57,558 UTC [1081294] INFO esmvalcore._task:793 Progress: 0 tasks running, 1 tasks waiting for ancestors, 4/5 done 2024-03-21 12:09:57,658 UTC [1081294] INFO esmvalcore._task:793 Progress: 1 tasks running, 0 tasks waiting for ancestors, 4/5 done 2024-03-21 12:09:57,672 UTC [1081468] INFO esmvalcore._task:261 Starting task time_average_1986-2005/my_diagnostic in process [1081468] 2024-03-21 12:09:57,674 UTC [1081468] INFO esmvalcore._task:502 Running command ['/projects/NS2980K/conda/esmvaltool2.10.0/bin/python', '/projects/NS2980K/home/tomast/ESMValTool/diag_scripts/2.10.0/my_diagnostic/extract_ocean_field.py', '/projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic/settings.yml'] 2024-03-21 12:09:57,675 UTC [1081468] DEBUG esmvalcore._task:503 in environment {'MPLBACKEND': 'Agg'} 2024-03-21 12:09:57,675 UTC [1081468] DEBUG esmvalcore._task:505 in current working directory: /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic 2024-03-21 12:09:57,675 UTC [1081468] INFO esmvalcore._task:506 Writing output to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/work/time_average_1986-2005/my_diagnostic 2024-03-21 12:09:57,675 UTC [1081468] INFO esmvalcore._task:507 Writing plots to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/plots/time_average_1986-2005/my_diagnostic 2024-03-21 12:09:57,675 UTC [1081468] INFO esmvalcore._task:508 Writing log to /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic/log.txt 2024-03-21 12:09:57,675 UTC [1081468] INFO esmvalcore._task:518 To re-run this diagnostic script, run: cd /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic; MPLBACKEND="Agg" /projects/NS2980K/conda/esmvaltool2.10.0/bin/python /projects/NS2980K/home/tomast/ESMValTool/diag_scripts/2.10.0/my_diagnostic/extract_ocean_field.py /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic/settings.yml 2024-03-21 12:10:02,701 UTC [1081468] INFO esmvalcore._task:128 Maximum memory used (estimate): 0.3 GB 2024-03-21 12:10:02,701 UTC [1081468] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-21 12:10:02,859 UTC [1081294] INFO esmvalcore._task:128 Maximum memory used (estimate): 8.1 GB 2024-03-21 12:10:02,860 UTC [1081294] INFO esmvalcore._task:130 Sampled every second. It may be inaccurate if short but high spikes in memory consumption occur. 2024-03-21 12:10:02,860 UTC [1081294] ERROR esmvalcore._main:530 Program terminated abnormally, see stack trace below for more information: multiprocessing.pool.RemoteTraceback: """ Traceback (most recent call last): File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/multiprocessing/pool.py", line 125, in worker result = (True, func(*args, **kwds)) ^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 816, in _run_task output_files = task.run() ^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 264, in run self.output_files = self._run(input_files) ^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 595, in _run raise DiagnosticError( esmvalcore._task.DiagnosticError: Diagnostic script /projects/NS2980K/home/tomast/ESMValTool/diag_scripts/2.10.0/my_diagnostic/extract_ocean_field.py failed with return code 1. See the log in /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic/log.txt """ The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 518, in run fire.Fire(ESMValTool()) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 141, in Fire component_trace = _Fire(component, args, parsed_flag_args, context, name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 475, in _Fire component, remaining_args = _CallAndUpdateTrace( ^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/fire/core.py", line 691, in _CallAndUpdateTrace component = fn(*varargs, **kwargs) ^^^^^^^^^^^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 405, in run self._run(recipe, session) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 447, in _run process_recipe(recipe_file=recipe, session=session) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_main.py", line 130, in process_recipe recipe.run() File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_recipe/recipe.py", line 1075, in run self.tasks.run(max_parallel_tasks=self.session['max_parallel_tasks']) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 738, in run self._run_parallel(address, max_parallel_tasks) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 782, in _run_parallel _copy_results(task, running[task]) File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/site-packages/esmvalcore/_task.py", line 805, in _copy_results task.output_files, task.products = future.get() ^^^^^^^^^^^^ File "/projects/NS2980K/conda/esmvaltool2.10.0/lib/python3.11/multiprocessing/pool.py", line 774, in get raise self._value esmvalcore._task.DiagnosticError: Diagnostic script /projects/NS2980K/home/tomast/ESMValTool/diag_scripts/2.10.0/my_diagnostic/extract_ocean_field.py failed with return code 1. See the log in /projects/NS2980K/www/tomast/esmvaltool2.10.0/output/recipe_pH_NorESM2_20240321_120934/run/time_average_1986-2005/my_diagnostic/log.txt 2024-03-21 12:10:02,875 UTC [1081294] INFO esmvalcore._main:534 If you have a question or need help, please start a new discussion on https://github.com/ESMValGroup/ESMValTool/discussions If you suspect this is a bug, please open an issue on https://github.com/ESMValGroup/ESMValTool/issues To make it easier to find out what the problem is, please consider attaching the files run/recipe_*.yml and run/main_log_debug.txt from the output directory.